prot_H-paniculata_contig6603.14478.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6603.14478.1
Unique Nameprot_H-paniculata_contig6603.14478.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.150e-76
Identity = 141/239 (59.00%), Postives = 163/239 (68.20%), Query Frame = 0
Query:    2 LDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTSSNISEPETEVLARAYGPKSPIHKYLDLPVSEFVDESFALLPQDANILDPRLMGPNFMNERVRFRLPDGA---GGGNXXXXXGAGI-DELL 236
            LDT+GD +AAREAMAS LLRFP+MLEPLLEKCG++PRSTTYP +WKSVMQHPHFG+A  RLP GHVL HLA IFA RG ++WKHERA+ELLYDGAGIALQGL    ++     + +  A     +  PS+                         E EV+ RAYG  SPI KYLDL +S+F DESFALLPQDANILDPRLMGPNFMNERVR R+P G    GGG      G  + DE+L
Sbjct:  271 LDTTGDSTAAREAMASTLLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHERAEELLYDGAGIALQGLPSTPATREAAGAGAEEAGIIYADFCPSAA------------------------EVEVVQRAYGEGSPIQKYLDLALSDF-DESFALLPQDANILDPRLMGPNFMNERVRLRVPPGVVPGGGGERGWGGGQEVLDEVL 484          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.640e-73
Identity = 143/239 (59.83%), Postives = 163/239 (68.20%), Query Frame = 0
Query:    2 LDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTSSNISEPETEVLARAYGPKSPIHKYLDLPVSEFVDESFALLPQDANILDPRLMGPNFMNERVRFRLPDGA---GGGNXXXXXGAGI-DELL 236
            LDT+GD +AAREAMAS +LRFP+MLEPLLEKCG++PRSTTYP +WKSVMQHPHFG+A  RLP GHVL HLA IFA RG ++WKHERA+ELLYDGAGIALQGL         +T A+  AA                       G+       S  E EV+ RAYG  SPI KYLDL +S+F DESFALLPQDANILDPRLMGPNFMNERVR R+P G    GGG      G  + DE+L
Sbjct:  473 LDTTGDSTAAREAMASTMLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHERAEELLYDGAGIALQGLP--------STPATREAAGXXXXX----------XXXXXXAGTIGADFCPSAAEVEVVQRAYGEGSPIQKYLDLSLSDF-DESFALLPQDANILDPRLMGPNFMNERVRLRVPPGVVPGGGGERGWGGGQEVLDEVL 692          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.990e-19
Identity = 77/220 (35.00%), Postives = 98/220 (44.55%), Query Frame = 0
Query:    5 SGDVSAAREAMASALLRFPVMLEPLLEKCGLS-PRSTTYPQNWKSVMQHPHFGQANTRLPR-------GHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTSSNISEPETEVLARAYGPK-SPIHKYLDLPVSEFVDES-FALLPQDANILDPRLMGPNFMNERVRFR 214
            +GD +AAR A   AL RFP  LEPLL   G    R+  +P +WKSV +  HFG A              H L HL +I+A+R  ++W+ +  QELLYDGAG+ALQG                                                    E E EVLARAY  K SP+ KYL L  ++F D + +  LP D NIL+P L  P  +    R R
Sbjct:  504 AGDAAAARAAARRALRRFPAALEPLLAAAGAPHARTQAHPVDWKSVFRSAHFGGAXXXXXXXXXXXXVAHPLAHLCAIYAARAGELWRRDDTQELLYDGAGLALQGAGGXXXXXXXXXXXXXXXX-----------------------XDAGADDACCEEEREVLARAYRLKDSPLLKYLALSPADFSDAAAYQQLPHDVNILNPALAAPQMLPPGRRLR 700          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A4D9DDK5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDK5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.820e-11
Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 0
Query:   11 AREAMASALLRFPVMLEPLLEKCG--LSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGA 96
            +++ +  AL RFP++L+PL+EKC   L  R T   Q W  ++ HP F +A  RLP G +L  L S++  R Y++W H    + LYDGA
Sbjct:  421 SKDDLQEALRRFPLVLQPLVEKCRNELGSRIT---QEWGPILCHPFFARAEARLPPGCILPRLVSVYVQRSYNLWVHPEDMQFLYDGA 505          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: G4YZT6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT6_PHYSP)

HSP 1 Score: 65.5 bits (158), Expect = 1.320e-8
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 0
Query:    6 GDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 107
            G+ + A++ +A+ALL+FP ML+PLLEK  ++P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L  GA  AL    +V+
Sbjct:  905 GNETEAKDLLAAALLKFPTMLKPLLEKIAVNPSSSS----WQPILSSRVFANARSVDGEHSVLQHLLDIYVTRNHSIWKVNDAQSFLLQGAQHALASPALVS 1002          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: W2QZ72_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2QZ72_PHYPN)

HSP 1 Score: 62.4 bits (150), Expect = 1.270e-7
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 0
Query:    6 GDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 107
            G+ S A+E +A+ALL+FP +L+PLLEK   +P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L   A  AL    +V+
Sbjct:  424 GNESEAKEKLATALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWKVNDAQSFLLRSAKHALASPALVS 521          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: V9EAW3_PHYPR (EDR2_C domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EAW3_PHYPR)

HSP 1 Score: 62.4 bits (150), Expect = 1.390e-7
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = 0
Query:    6 GDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 107
            G+ S A+E +A+ALL+FP +L+PLLEK   +P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L   A  AL    +V+
Sbjct:  677 GNESEAKEKLATALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWKVNDAQSFLLRSAKHALASPALVS 774          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: K3WYM9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYM9_GLOUD)

HSP 1 Score: 62.0 bits (149), Expect = 1.710e-7
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0
Query:    6 GDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIAL 100
            G+   A+E +A ALLRFP +L+PLLEK  ++  S T    WK ++    F  A T    G ++ HL +I+ SR + +WK    Q  L  GA  AL
Sbjct:  423 GNADEAKELLAKALLRFPTVLKPLLEKIAVNTSSPT----WKPILSSRVFANAKTLNDDG-LIDHLLAIYVSRNHTLWKVNDVQNFLLRGAQHAL 512          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A6G0PRE5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PRE5_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.170e-7
Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 0
Query:    6 GDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 107
            G+ + A++ +A+ALL+FP ML+P LEK   +P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L   A  AL    +V+
Sbjct:  464 GNETEAKDLLAAALLKFPTMLKPFLEKIAANPSSSS----WQPILSSRVFANARSVEGEHSVLQHLLDIYVTRNHSIWKVNAAQSFLLKSAQHALASPALVS 561          
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A5D6XJL8_9STRA (EDR2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.110e-6
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 0
Query:    6 GDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIAL 100
            G+  AA+E +A ALL+FP +L+PLLEK   +  S T    WK V+    F  A      G ++ HL SI+ +R + +WK    Q LL   A  AL
Sbjct:  647 GNADAAKEQLAKALLQFPSVLKPLLEKISANTSSAT----WKPVLASRVFANAKALADDG-LIAHLLSIYVTRNHTLWKVNDVQNLLLRAAQHAL 736          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5LA68_9PHAE1.150e-7659.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK35_ECTSI1.640e-7359.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGE8_9STRA1.990e-1935.00Transcriptional repressor TCF25-domain-containing ... [more]
A0A4D9DDK5_9STRA2.820e-1140.91Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
G4YZT6_PHYSP1.320e-836.27Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W2QZ72_PHYPN1.270e-736.27Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
V9EAW3_PHYPR1.390e-736.27EDR2_C domain-containing protein n=6 Tax=Phytophth... [more]
K3WYM9_GLOUD1.710e-738.95Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6G0PRE5_9STRA3.170e-734.31Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A5D6XJL8_9STRA1.110e-638.95EDR2_C domain-containing protein n=1 Tax=Pythium b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006994TCF25/Rqc1PFAMPF04910Tcf25coord: 7..192
e-value: 2.3E-7
score: 30.2
IPR006994TCF25/Rqc1PANTHERPTHR22684NULP1-RELATEDcoord: 7..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6603contigH-paniculata_contig6603:5371..8207 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6603.14478.1mRNA_H-paniculata_contig6603.14478.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6603 5371..8423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6603.14478.1 ID=prot_H-paniculata_contig6603.14478.1|Name=mRNA_H-paniculata_contig6603.14478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVM
QHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIAL
QGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTS
SNISEPETEVLARAYGPKSPIHKYLDLPVSEFVDESFALLPQDANILDPR
LMGPNFMNERVRFRLPDGAGGGNGGGRGGAGIDELL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006994TCF25/Rqc1