prot_H-paniculata_contig660.14476.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig660.14476.1
Unique Nameprot_H-paniculata_contig660.14476.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5K4L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4L3_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.430e-19
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    7 RKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            R  R G+V  A  G  ++E  E++ N  AERV GKK++RCG SVEWW DE +E I ERRE   R        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:   58 RGSRTGDVHAA--GDRVIEGWESIVNATAERVVGKKVVRCGVSVEWWDDELKEEIGERREVFKRYLSGASEESSEKYRAKRKQVKGLVRKKKKCIWDEVVQKAN 159          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5KIF2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF2_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.500e-18
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV GKK++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  223 LRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 327          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5K6E3_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E3_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.530e-18
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV GKK++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  447 LRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 551          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5JZL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.590e-18
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV GKK++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:   84 LRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 188          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5L5C9_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.640e-18
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV GKK++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  690 LRSVEDGQVDVQAAGDRVIEGWESIVNATAERVVGKKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 794          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5JXG5_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG5_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.970e-18
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV G+K++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  150 LRSVEDGQVDVQTAGDRVIEGWESIVNATAERVVGRKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 254          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5JS68_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS68_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.020e-18
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV G+K++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:   61 LRSVEDGQVDVQTAGDRVIEGWESIVNATAERVVGRKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 165          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5KL47_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL47_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.050e-18
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV G+K++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  107 LRSVEDGQVDVQTAGDRVIEGWESIVNATAERVVGRKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVRKKKKCIWDEVVQKAN 211          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5K6P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P2_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.080e-18
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   + G  ++E  E++ N  AERV G+K++RCG SV+WW DE +E I ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  527 LRSVEDGQVDVQTAGDRVIEGWESIVNATAERVVGRKVVRCGVSVKWWDDELKEEIGERREVFKQYLSEASEESWEKYRAKRKQVKGLVKKKKKCIWDEVVQKAN 631          
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Match: A0A6H5JUS9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS9_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 7.590e-18
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    6 VRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSVEWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKESWDEVVQEVN 110
            +R    G+V   ++G   +E  E++ N  AERV G+K++RCG SV+WW DE  E I+ERRE   +        + E++  KRKQ +G+V  KKK  WDEVVQ+ N
Sbjct:  305 LRSVEDGQVDVQASGDRGIEGWESIVNATAERVVGRKVVRCGVSVKWWDDELEEEIRERREVFKQYLSEASEESWEKYRAKRKQVKGLVRKKKKCIWDEVVQKAN 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig660.14476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5K4L3_9PHAE2.430e-1948.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIF2_9PHAE1.500e-1843.81Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K6E3_9PHAE1.530e-1843.81Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JZL9_9PHAE1.590e-1843.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L5C9_9PHAE1.640e-1843.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JXG5_9PHAE3.970e-1842.86Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JS68_9PHAE4.020e-1842.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KL47_9PHAE4.050e-1842.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K6P2_9PHAE4.080e-1842.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS9_9PHAE7.590e-1842.86Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig660contigH-paniculata_contig660:7427..7798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig660.14476.1mRNA_H-paniculata_contig660.14476.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig660 7237..7798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig660.14476.1 ID=prot_H-paniculata_contig660.14476.1|Name=mRNA_H-paniculata_contig660.14476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MVQGSVRKYRGGEVKRASTGHGLLEACENVGNVAAERVFGKKIIRCGTSV
EWWGDESREAIKERRETPTRNTGMTIGTNVEEFGFKRKQAQGIVIGKKKE
SWDEVVQEVNTFGRWRKVHVARD*
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