mRNA_H-paniculata_contig6598.14470.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 1.200e-142 Identity = 215/296 (72.64%), Postives = 254/296 (85.81%), Query Frame = 1
Query: 1 SVNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEA---AVEEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
SV GMQ+REKSIAKSLS LSL D++ + QAK++E A VE+EV VTWPL++AVLVAV+L++LVG+NIGVMNAPE VVFPGHTT EW+ AV+VFAIGGPFGAI+AG VSN+NGRRGAIIVNTW +L+GGL+ A + WL+ ARF+ GFACGF+ VVVPIYLGELAPPTLRGTLGT+TQFA+VIGIL SNL+AFP AT +GWR++FA+TP LA VEL+C+P I ES RWLLA D++SM AR+AI KLRG +D D+QIEIDHILEASSAQRTSHTSAHS+GAVLDLF DKR R
Sbjct: 54 SVYGMQYREKSIAKSLSKLSLTDLD-IAGQAKYLEGAEAEGVEDEVVVTWPLVTAVLVAVLLEFLVGFNIGVMNAPEEVVFPGHTTTEWSLAVSVFAIGGPFGAILAGTVSNRNGRRGAIIVNTWMYLIGGLLFALAPTVLWLVPARFMIGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVIGILGSNLLAFPLATPSGWRWMFAVTPFLALVELVCIPFILESLRWLLAKDQYSMEARLAIGKLRGLTDDNDIQIEIDHILEASSAQRTSHTSAHSRGAVLDLFMDKRQR 348
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA) HSP 1 Score: 336 bits (862), Expect = 5.480e-109 Identity = 175/294 (59.52%), Postives = 223/294 (75.85%), Query Frame = 1
Query: 1 SVNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAVEEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTS-HTSAHSKGAVLDLFTDKRVR 879
SV GMQ+RE+SIAKSLS +SLADM G + + + +EV +T PL++A++VAV+L +LVGYN GVMNA EPVVFPGH+ EW+ AVAVFA+GGPFGA++AG VSN GR AI N W FL GG LT A +++W+I R + GFA G+A V+VPIYLGELAPPTLRGTLGTLTQF+MVIGILASNL++FP A +GWR L +T VL+ +L+ P I ESPRWLL+ DE+S++A + +K+LRGF++D +VQ E+DHI++AS QR +SAH GAV DL TD RVR
Sbjct: 63 SVYGMQYREQSIAKSLSRVSLADMGGAINEQDALLANVDVDEVVLTTPLMAAIMVAVMLMFLVGYNTGVMNAVEPVVFPGHSVTEWSLAVAVFAVGGPFGAVLAGKVSNLQGRSAAIKGNMWLFLAGGAALTIAPSIYWIIAGRVLVGFASGYASVIVPIYLGELAPPTLRGTLGTLTQFSMVIGILASNLLSFPLADESGWRMLLGVTAVLSLCQLMASPFIVESPRWLLSKDEYSIQASMLLKQLRGFRSDTEVQKEVDHIVQASRVQRLEGQSSAHGSGAVWDLITDPRVR 356
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: I2CP18_NANGC (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP18_NANGC) HSP 1 Score: 321 bits (822), Expect = 1.470e-102 Identity = 167/297 (56.23%), Postives = 221/297 (74.41%), Query Frame = 1
Query: 4 VNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAV-----EEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
V+G+QF+E + K LS SL +A + EE+A+ ++V VT PL AV +AV+ ++LVGYN +MNAPE VVFPGHTTAEW+ AV+ FAIGGP GAI+ G+++NK GRRGA+++N FLVGG++L A ++FWLI ARF+ G A GFA V+VPIYLGELAPPTLRGTLGTLTQF++V GIL S+++A+P AT GWR+LFA+T +LA ++LLC P + ESPRWLLA DE S ARV +KKLRGF+ ++V++E++H++ AS +T H SAHS A+ DLF D VR
Sbjct: 64 VHGLQFKEHVLHKVLSQKSLR-----LAGEEATEESALLADVDVDQVIVTAPLAFAVFIAVIAEFLVGYNTSLMNAPEAVVFPGHTTAEWSLAVSAFAIGGPGGAILGGILANKRGRRGALLINALIFLVGGIILAGAPSIFWLIPARFIIGLASGFASVLVPIYLGELAPPTLRGTLGTLTQFSLVTGILVSDVLAYPLATAQGWRFLFAVTALLACLQLLCSPFLLESPRWLLARDEKSRDARVIMKKLRGFREAKEVEMEVEHMMMASRRAKTPHNSAHSASALYDLFRDPSVR 355
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A1Z5JUP9_FISSO (MFS transporter, SP family, solute carrier family 2 (Facilitated glucose transporter), member 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUP9_FISSO) HSP 1 Score: 288 bits (737), Expect = 1.670e-89 Identity = 153/303 (50.50%), Postives = 212/303 (69.97%), Query Frame = 1
Query: 10 GMQFREKSIAKSLSLLSL---ADMEGMVAQAK----------FVEEAAVEEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
G+Q RE++I+K+ + + AD EG+ + + ++E + V VT PL+ A++VA Q+LVGYN GVMN P VVFPGH+T W+ AVA FA+GGPFGAIV G ++++ GRRGA+++ TWTFL+GGL+ T A +MF +ILARFV GFA GF+ V+VPIYLGELAPPT+RG LGT+TQFAMVIGILA++L+AFPFA WR LF TP++A ++L+ P + ESPRWLL D S++AR +K+LRG + D +V+ E+ H+L +AQ+ TS + G + D+ + RVR
Sbjct: 98 GLQSRERAISKAFASYAAELDADQEGLSGEERTSRMSRASMVILDELEFDANV-VTIPLVCAIIVATTSQFLVGYNTGVMNPPVNVVFPGHSTLSWSMAVAAFAVGGPFGAIVGGQMADQRGRRGALLIGTWTFLLGGLLQTFALDMFTIILARFVIGFASGFSSVLVPIYLGELAPPTMRGQLGTVTQFAMVIGILAADLIAFPFAKEGKWRMLFGFTPLMALLQLILAPFLLESPRWLLGRDPKSLKARYILKRLRGLRYDHEVETELGHLLVGGAAQQQEQTS--TIGVLKDMMSQPRVR 397
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S4J4S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4S9_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.640e-88 Identity = 143/251 (56.97%), Postives = 188/251 (74.90%), Query Frame = 1
Query: 133 VTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAH--SKGAVLDLFTDKRVR 879
VT PLI AV+VA + +LVGYN GVMNAP VVFP H+TA W+ AVA FA+GGPFGA VAG +++ GRRGA+++NT+ FL+GGL+ T A +M ++++RFV G A G + V+VPIYLGELAPPTLRGTLGT+TQFA+VIGIL SNL+ FPFAT + WR+LFA+TP A V+LL P + ESPRWLL D S +AR IKK+RG + D +V+ E H + A++ Q+ S TS S+ AV ++F D+++R
Sbjct: 1 VTTPLIFAVIVAAMSMFLVGYNTGVMNAPSSVVFPAHSTATWSMAVAAFAVGGPFGAYVAGNLADTRGRRGALLINTYLFLLGGLIQTFAIDMTTIVVSRFVIGVASGSSSVLVPIYLGELAPPTLRGTLGTMTQFALVIGILVSNLLGFPFATEDRWRFLFAVTPFFALVQLLLSPFLLESPRWLLGRDPNSRKARFIIKKIRGLRYDHEVETEAGHFVAAAAVQKPSETSEKVGSQSAVSEMFADRKIR 251
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S3PYK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYK8_9STRA) HSP 1 Score: 277 bits (709), Expect = 5.340e-86 Identity = 146/264 (55.30%), Postives = 188/264 (71.21%), Query Frame = 1
Query: 121 EEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTS-----------HTSAHSKGAVLDLFTDKRVR 879
++V VT PLI AVLVA V Q+LVGYNIGVMNAPE VVFPGHTT EW+ AVA F GGPFGA AG ++ GRRGA+++ TWTFL+GGL+ T A NM +I++R + G A G + V+VPIYLGELAPPTLRGTLGT+TQFAMV+GIL ++L+AFPFATL WR LF++ ++A ++LLC P + ESPRWLL+ S +AR IKKLRG + D +V E+DH L A + Q + +T + G +D+ D++VR
Sbjct: 52 DKVMVTTPLIFAVLVATVGQFLVGYNIGVMNAPEKVVFPGHTTGEWSIAVAAFCFGGPFGAYFAGTLAETRGRRGALLICTWTFLLGGLIQTTAPNMLAIIISRLIIGLASGISTVIVPIYLGELAPPTLRGTLGTMTQFAMVVGILMADLIAFPFATLEKWRMLFSVNLMMAFLQLLCAPWLLESPRWLLSKKPGSRKARYIIKKLRGLRYDHEVDTEVDHFLGAVNVQNVNDYDDEIGNENRNTDMKTIG-FMDMLMDEKVR 314
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A8J9X0L5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0L5_PHATR) HSP 1 Score: 270 bits (689), Expect = 1.010e-84 Identity = 129/229 (56.33%), Postives = 173/229 (75.55%), Query Frame = 1
Query: 142 PLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTS 828
PL+ A++VA Q+LVGYN GVMN+P VVFPGH+T W+ AVA FA+GGPFGA+V G ++++ GRRGA++++TWTFL+GG++ A +M +I++R + GFA G++ V+VPIYLGELAPPTLRG LGT+TQFAMV+GIL SNL+AFP AT + WR LFA+TP +A +LL P + ESPRWLL D S++AR IK+LRG + D +V+ E+ H + AQR TS
Sbjct: 2 PLVFAIIVAAASQFLVGYNTGVMNSPSKVVFPGHSTLSWSLAVAAFAVGGPFGALVGGKMADQRGRRGALLIDTWTFLLGGIIQVFALDMVTIIISRLIIGFASGYSSVLVPIYLGELAPPTLRGMLGTITQFAMVLGILVSNLLAFPLATDDKWRLLFAVTPAIAISQLLLAPFLLESPRWLLGRDSKSLKARYIIKRLRGLRYDHEVETEVGHFMMGGVAQRQGQTS 230
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S2KYN2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYN2_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.690e-84 Identity = 140/249 (56.22%), Postives = 182/249 (73.09%), Query Frame = 1
Query: 133 VTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
VT PLI AV VA + Q+LVGYN GVMNAP VVFP H+TA W+ AVA FAIGGPFG+ +AG +++ GRRGA+++NTWTFL+GGL+ T A +MF +I++R + GFA GF+ V+VPIYLGEL+PPTLRG LGTLTQFA+VIGIL S+ ++FP AT + WRYLF +T + AA +LLC P + ESPRWLL+ D S +AR IKKLRG D ++ IE D+ + A+ Q T + ++ + DK VR
Sbjct: 148 VTTPLIFAVFVAAMAQFLVGYNTGVMNAPSNVVFPDHSTASWSIAVAAFAIGGPFGSNIAGSLADSRGRRGALLINTWTFLLGGLVQTFALDMFSIIVSRLIIGFASGFSSVLVPIYLGELSPPTLRGMLGTLTQFALVIGILISDFLSFPLATESNWRYLFFVTALTAAFQLLCAPFLLESPRWLLSRDPKSKKARYIIKKLRGLHYDYEIDIEADNYISAARVQSCEPTG---ESPMMQMLHDKSVR 393
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S1XZ20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ20_9STRA) HSP 1 Score: 271 bits (694), Expect = 3.200e-84 Identity = 138/241 (57.26%), Postives = 177/241 (73.44%), Query Frame = 1
Query: 160 LVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNG-WRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
+VAVV Q+LVGYN VMNAPE ++F GHTT EWA V+ FAIGGP GA++ G SNK GRRGA++++ W F++ GL L + ++ LI+ARF+ G A GFA VV+P+YLGE+APPT+RG LGT TQFAMVIGIL ++L+AFP A WR L +TPVLAAV++L PL+ ESPRW L+ D +AR + KLRGF+ +++ E+DHILEAS T HTSAHS GA+ DL TD+ VR
Sbjct: 40 VVAVVSQFLVGYNTAVMNAPEAIIFEGHTTLEWAFVVSAFAIGGPLGAVMGGRASNKYGRRGALLIDMWIFVISGLALALSPSIQVLIVARFLVGVAAGFASVVIPVYLGEIAPPTMRGALGTCTQFAMVIGILVADLLAFPLAKPGMFWRMLLGVTPVLAAVQILLAPLLVESPRWRLSRDPNCKKARRDLYKLRGFRTHAELEHEVDHILEASRTALTRHTSAHSGGAMWDLLTDRDVR 280
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S4RLE4_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLE4_9STRA) HSP 1 Score: 275 bits (703), Expect = 4.490e-84 Identity = 149/297 (50.17%), Postives = 203/297 (68.35%), Query Frame = 1
Query: 4 VNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAVE-EEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTS----HTSAHSKGAVLDLFTDKRVR 879
++ M+ + KS + LS A++E + A + +E + V VT PLI AV++A ++Q++VGYN GVMNAP VVFPGH+T WA AVA FA+GGPFGA++AG +++ GRRGA++++TW FL+GGL+ T A +M+ +I+ARF+ GF GFA V+VPIYLGELAPP LRG GTLTQFAMVIGIL S+ AFPFAT WRYLF++TP+ AA+ LL P + ESPRWLL D S +AR IK LRG + D +V+ E+ H + AS Q + + +S A ++ +VR
Sbjct: 125 LDAMEADQLEFKKSRTHLSDAELEKRRSHASLLLLDELEFDAVMVTSPLIIAVVMASMVQFMVGYNTGVMNAPASVVFPGHSTGSWAIAVAAFAVGGPFGAMMAGKLADSRGRRGALLIDTWIFLLGGLLQTLAIDMYSIIIARFIIGFGSGFASVLVPIYLGELAPPNLRGMFGTLTQFAMVIGILVSDFFAFPFATEEKWRYLFSITPITAALLLLFSPFLLESPRWLLGRDRSSRKARYIIKILRGLRYDHEVETEVSHFVSASQNQHCDGSCENDTVNSGVAFTEMLMTPKVR 421 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6598.14470.1 >prot_H-paniculata_contig6598.14470.1 ID=prot_H-paniculata_contig6598.14470.1|Name=mRNA_H-paniculata_contig6598.14470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp MQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAVEEEVAVTWPLISAVLback to top mRNA from alignment at H-paniculata_contig6598:7585..12110+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6598.14470.1 ID=mRNA_H-paniculata_contig6598.14470.1|Name=mRNA_H-paniculata_contig6598.14470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4526bp|location=Sequence derived from alignment at H-paniculata_contig6598:7585..12110+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6598:7585..12110+ >mRNA_H-paniculata_contig6598.14470.1 ID=mRNA_H-paniculata_contig6598.14470.1|Name=mRNA_H-paniculata_contig6598.14470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at H-paniculata_contig6598:7585..12110+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |