mRNA_H-paniculata_contig6598.14470.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6598.14470.1
Unique NamemRNA_H-paniculata_contig6598.14470.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 1.200e-142
Identity = 215/296 (72.64%), Postives = 254/296 (85.81%), Query Frame = 1
Query:    1 SVNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEA---AVEEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
            SV GMQ+REKSIAKSLS LSL D++ +  QAK++E A    VE+EV VTWPL++AVLVAV+L++LVG+NIGVMNAPE VVFPGHTT EW+ AV+VFAIGGPFGAI+AG VSN+NGRRGAIIVNTW +L+GGL+   A  + WL+ ARF+ GFACGF+ VVVPIYLGELAPPTLRGTLGT+TQFA+VIGIL SNL+AFP AT +GWR++FA+TP LA VEL+C+P I ES RWLLA D++SM AR+AI KLRG  +D D+QIEIDHILEASSAQRTSHTSAHS+GAVLDLF DKR R
Sbjct:   54 SVYGMQYREKSIAKSLSKLSLTDLD-IAGQAKYLEGAEAEGVEDEVVVTWPLVTAVLVAVLLEFLVGFNIGVMNAPEEVVFPGHTTTEWSLAVSVFAIGGPFGAILAGTVSNRNGRRGAIIVNTWMYLIGGLLFALAPTVLWLVPARFMIGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVIGILGSNLLAFPLATPSGWRWMFAVTPFLALVELVCIPFILESLRWLLAKDQYSMEARLAIGKLRGLTDDNDIQIEIDHILEASSAQRTSHTSAHSRGAVLDLFMDKRQR 348          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA)

HSP 1 Score: 336 bits (862), Expect = 5.480e-109
Identity = 175/294 (59.52%), Postives = 223/294 (75.85%), Query Frame = 1
Query:    1 SVNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAVEEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTS-HTSAHSKGAVLDLFTDKRVR 879
            SV GMQ+RE+SIAKSLS +SLADM G + +   +      +EV +T PL++A++VAV+L +LVGYN GVMNA EPVVFPGH+  EW+ AVAVFA+GGPFGA++AG VSN  GR  AI  N W FL GG  LT A +++W+I  R + GFA G+A V+VPIYLGELAPPTLRGTLGTLTQF+MVIGILASNL++FP A  +GWR L  +T VL+  +L+  P I ESPRWLL+ DE+S++A + +K+LRGF++D +VQ E+DHI++AS  QR    +SAH  GAV DL TD RVR
Sbjct:   63 SVYGMQYREQSIAKSLSRVSLADMGGAINEQDALLANVDVDEVVLTTPLMAAIMVAVMLMFLVGYNTGVMNAVEPVVFPGHSVTEWSLAVAVFAVGGPFGAVLAGKVSNLQGRSAAIKGNMWLFLAGGAALTIAPSIYWIIAGRVLVGFASGYASVIVPIYLGELAPPTLRGTLGTLTQFSMVIGILASNLLSFPLADESGWRMLLGVTAVLSLCQLMASPFIVESPRWLLSKDEYSIQASMLLKQLRGFRSDTEVQKEVDHIVQASRVQRLEGQSSAHGSGAVWDLITDPRVR 356          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: I2CP18_NANGC (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP18_NANGC)

HSP 1 Score: 321 bits (822), Expect = 1.470e-102
Identity = 167/297 (56.23%), Postives = 221/297 (74.41%), Query Frame = 1
Query:    4 VNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAV-----EEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
            V+G+QF+E  + K LS  SL      +A  +  EE+A+      ++V VT PL  AV +AV+ ++LVGYN  +MNAPE VVFPGHTTAEW+ AV+ FAIGGP GAI+ G+++NK GRRGA+++N   FLVGG++L  A ++FWLI ARF+ G A GFA V+VPIYLGELAPPTLRGTLGTLTQF++V GIL S+++A+P AT  GWR+LFA+T +LA ++LLC P + ESPRWLLA DE S  ARV +KKLRGF+  ++V++E++H++ AS   +T H SAHS  A+ DLF D  VR
Sbjct:   64 VHGLQFKEHVLHKVLSQKSLR-----LAGEEATEESALLADVDVDQVIVTAPLAFAVFIAVIAEFLVGYNTSLMNAPEAVVFPGHTTAEWSLAVSAFAIGGPGGAILGGILANKRGRRGALLINALIFLVGGIILAGAPSIFWLIPARFIIGLASGFASVLVPIYLGELAPPTLRGTLGTLTQFSLVTGILVSDVLAYPLATAQGWRFLFAVTALLACLQLLCSPFLLESPRWLLARDEKSRDARVIMKKLRGFREAKEVEMEVEHMMMASRRAKTPHNSAHSASALYDLFRDPSVR 355          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A1Z5JUP9_FISSO (MFS transporter, SP family, solute carrier family 2 (Facilitated glucose transporter), member 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUP9_FISSO)

HSP 1 Score: 288 bits (737), Expect = 1.670e-89
Identity = 153/303 (50.50%), Postives = 212/303 (69.97%), Query Frame = 1
Query:   10 GMQFREKSIAKSLSLLSL---ADMEGMVAQAK----------FVEEAAVEEEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
            G+Q RE++I+K+ +  +    AD EG+  + +           ++E   +  V VT PL+ A++VA   Q+LVGYN GVMN P  VVFPGH+T  W+ AVA FA+GGPFGAIV G ++++ GRRGA+++ TWTFL+GGL+ T A +MF +ILARFV GFA GF+ V+VPIYLGELAPPT+RG LGT+TQFAMVIGILA++L+AFPFA    WR LF  TP++A ++L+  P + ESPRWLL  D  S++AR  +K+LRG + D +V+ E+ H+L   +AQ+   TS  + G + D+ +  RVR
Sbjct:   98 GLQSRERAISKAFASYAAELDADQEGLSGEERTSRMSRASMVILDELEFDANV-VTIPLVCAIIVATTSQFLVGYNTGVMNPPVNVVFPGHSTLSWSMAVAAFAVGGPFGAIVGGQMADQRGRRGALLIGTWTFLLGGLLQTFALDMFTIILARFVIGFASGFSSVLVPIYLGELAPPTMRGQLGTVTQFAMVIGILAADLIAFPFAKEGKWRMLFGFTPLMALLQLILAPFLLESPRWLLGRDPKSLKARYILKRLRGLRYDHEVETELGHLLVGGAAQQQEQTS--TIGVLKDMMSQPRVR 397          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S4J4S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4S9_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.640e-88
Identity = 143/251 (56.97%), Postives = 188/251 (74.90%), Query Frame = 1
Query:  133 VTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAH--SKGAVLDLFTDKRVR 879
            VT PLI AV+VA +  +LVGYN GVMNAP  VVFP H+TA W+ AVA FA+GGPFGA VAG +++  GRRGA+++NT+ FL+GGL+ T A +M  ++++RFV G A G + V+VPIYLGELAPPTLRGTLGT+TQFA+VIGIL SNL+ FPFAT + WR+LFA+TP  A V+LL  P + ESPRWLL  D  S +AR  IKK+RG + D +V+ E  H + A++ Q+ S TS    S+ AV ++F D+++R
Sbjct:    1 VTTPLIFAVIVAAMSMFLVGYNTGVMNAPSSVVFPAHSTATWSMAVAAFAVGGPFGAYVAGNLADTRGRRGALLINTYLFLLGGLIQTFAIDMTTIVVSRFVIGVASGSSSVLVPIYLGELAPPTLRGTLGTMTQFALVIGILVSNLLGFPFATEDRWRFLFAVTPFFALVQLLLSPFLLESPRWLLGRDPNSRKARFIIKKIRGLRYDHEVETEAGHFVAAAAVQKPSETSEKVGSQSAVSEMFADRKIR 251          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S3PYK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYK8_9STRA)

HSP 1 Score: 277 bits (709), Expect = 5.340e-86
Identity = 146/264 (55.30%), Postives = 188/264 (71.21%), Query Frame = 1
Query:  121 EEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTS-----------HTSAHSKGAVLDLFTDKRVR 879
            ++V VT PLI AVLVA V Q+LVGYNIGVMNAPE VVFPGHTT EW+ AVA F  GGPFGA  AG ++   GRRGA+++ TWTFL+GGL+ T A NM  +I++R + G A G + V+VPIYLGELAPPTLRGTLGT+TQFAMV+GIL ++L+AFPFATL  WR LF++  ++A ++LLC P + ESPRWLL+    S +AR  IKKLRG + D +V  E+DH L A + Q  +           +T   + G  +D+  D++VR
Sbjct:   52 DKVMVTTPLIFAVLVATVGQFLVGYNIGVMNAPEKVVFPGHTTGEWSIAVAAFCFGGPFGAYFAGTLAETRGRRGALLICTWTFLLGGLIQTTAPNMLAIIISRLIIGLASGISTVIVPIYLGELAPPTLRGTLGTMTQFAMVVGILMADLIAFPFATLEKWRMLFSVNLMMAFLQLLCAPWLLESPRWLLSKKPGSRKARYIIKKLRGLRYDHEVDTEVDHFLGAVNVQNVNDYDDEIGNENRNTDMKTIG-FMDMLMDEKVR 314          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A8J9X0L5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0L5_PHATR)

HSP 1 Score: 270 bits (689), Expect = 1.010e-84
Identity = 129/229 (56.33%), Postives = 173/229 (75.55%), Query Frame = 1
Query:  142 PLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTS 828
            PL+ A++VA   Q+LVGYN GVMN+P  VVFPGH+T  W+ AVA FA+GGPFGA+V G ++++ GRRGA++++TWTFL+GG++   A +M  +I++R + GFA G++ V+VPIYLGELAPPTLRG LGT+TQFAMV+GIL SNL+AFP AT + WR LFA+TP +A  +LL  P + ESPRWLL  D  S++AR  IK+LRG + D +V+ E+ H +    AQR   TS
Sbjct:    2 PLVFAIIVAAASQFLVGYNTGVMNSPSKVVFPGHSTLSWSLAVAAFAVGGPFGALVGGKMADQRGRRGALLIDTWTFLLGGIIQVFALDMVTIIISRLIIGFASGYSSVLVPIYLGELAPPTLRGMLGTITQFAMVLGILVSNLLAFPLATDDKWRLLFAVTPAIAISQLLLAPFLLESPRWLLGRDSKSLKARYIIKRLRGLRYDHEVETEVGHFMMGGVAQRQGQTS 230          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S2KYN2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYN2_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.690e-84
Identity = 140/249 (56.22%), Postives = 182/249 (73.09%), Query Frame = 1
Query:  133 VTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
            VT PLI AV VA + Q+LVGYN GVMNAP  VVFP H+TA W+ AVA FAIGGPFG+ +AG +++  GRRGA+++NTWTFL+GGL+ T A +MF +I++R + GFA GF+ V+VPIYLGEL+PPTLRG LGTLTQFA+VIGIL S+ ++FP AT + WRYLF +T + AA +LLC P + ESPRWLL+ D  S +AR  IKKLRG   D ++ IE D+ + A+  Q    T    +  ++ +  DK VR
Sbjct:  148 VTTPLIFAVFVAAMAQFLVGYNTGVMNAPSNVVFPDHSTASWSIAVAAFAIGGPFGSNIAGSLADSRGRRGALLINTWTFLLGGLVQTFALDMFSIIVSRLIIGFASGFSSVLVPIYLGELSPPTLRGMLGTLTQFALVIGILISDFLSFPLATESNWRYLFFVTALTAAFQLLCAPFLLESPRWLLSRDPKSKKARYIIKKLRGLHYDYEIDIEADNYISAARVQSCEPTG---ESPMMQMLHDKSVR 393          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S1XZ20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ20_9STRA)

HSP 1 Score: 271 bits (694), Expect = 3.200e-84
Identity = 138/241 (57.26%), Postives = 177/241 (73.44%), Query Frame = 1
Query:  160 LVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNG-WRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR 879
            +VAVV Q+LVGYN  VMNAPE ++F GHTT EWA  V+ FAIGGP GA++ G  SNK GRRGA++++ W F++ GL L  + ++  LI+ARF+ G A GFA VV+P+YLGE+APPT+RG LGT TQFAMVIGIL ++L+AFP A     WR L  +TPVLAAV++L  PL+ ESPRW L+ D    +AR  + KLRGF+   +++ E+DHILEAS    T HTSAHS GA+ DL TD+ VR
Sbjct:   40 VVAVVSQFLVGYNTAVMNAPEAIIFEGHTTLEWAFVVSAFAIGGPLGAVMGGRASNKYGRRGALLIDMWIFVISGLALALSPSIQVLIVARFLVGVAAGFASVVIPVYLGEIAPPTMRGALGTCTQFAMVIGILVADLLAFPLAKPGMFWRMLLGVTPVLAAVQILLAPLLVESPRWRLSRDPNCKKARRDLYKLRGFRTHAELEHEVDHILEASRTALTRHTSAHSGGAMWDLLTDRDVR 280          
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Match: A0A7S4RLE4_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLE4_9STRA)

HSP 1 Score: 275 bits (703), Expect = 4.490e-84
Identity = 149/297 (50.17%), Postives = 203/297 (68.35%), Query Frame = 1
Query:    4 VNGMQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAVE-EEVAVTWPLISAVLVAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVAGLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFAGVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRYLFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQDVQIEIDHILEASSAQRTS----HTSAHSKGAVLDLFTDKRVR 879
            ++ M+  +    KS + LS A++E   + A  +    +E + V VT PLI AV++A ++Q++VGYN GVMNAP  VVFPGH+T  WA AVA FA+GGPFGA++AG +++  GRRGA++++TW FL+GGL+ T A +M+ +I+ARF+ GF  GFA V+VPIYLGELAPP LRG  GTLTQFAMVIGIL S+  AFPFAT   WRYLF++TP+ AA+ LL  P + ESPRWLL  D  S +AR  IK LRG + D +V+ E+ H + AS  Q       + + +S  A  ++    +VR
Sbjct:  125 LDAMEADQLEFKKSRTHLSDAELEKRRSHASLLLLDELEFDAVMVTSPLIIAVVMASMVQFMVGYNTGVMNAPASVVFPGHSTGSWAIAVAAFAVGGPFGAMMAGKLADSRGRRGALLIDTWIFLLGGLLQTLAIDMYSIIIARFIIGFGSGFASVLVPIYLGELAPPNLRGMFGTLTQFAMVIGILVSDFFAFPFATEEKWRYLFSITPITAALLLLFSPFLLESPRWLLGRDRSSRKARYIIKILRGLRYDHEVETEVSHFVSASQNQHCDGSCENDTVNSGVAFTEMLMTPKVR 421          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6598.14470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G798_ECTSI1.200e-14272.64MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZG82_9STRA5.480e-10959.52Solute carrier family facilitated glucose transpor... [more]
I2CP18_NANGC1.470e-10256.23Solute carrier family facilitated glucose transpor... [more]
A0A1Z5JUP9_FISSO1.670e-8950.50MFS transporter, SP family, solute carrier family ... [more]
A0A7S4J4S9_9STRA2.640e-8856.97Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S3PYK8_9STRA5.340e-8655.30Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A8J9X0L5_PHATR1.010e-8456.33Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S2KYN2_9STRA1.690e-8456.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1XZ20_9STRA3.200e-8457.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4RLE4_9STRA4.490e-8450.17Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6598contigH-paniculata_contig6598:7585..12110 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.5
Seed ortholog evalue4.2e-113
Seed eggNOG ortholog2880.D7G798
KEGG koko:K08142
KEGG TC2.A.1.1.12
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transmembrane transporter activity
EggNOG OGsCOG0477@1,KOG0569@2759
Ec32 ortholog descriptionSugar/inositol transporter
Ec32 orthologEc-04_003630.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons5
Model size879
Cds size867
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6598.14470.1prot_H-paniculata_contig6598.14470.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6598 7597..12110 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930777.2499373-UTR-H-paniculata_contig6598:7584..75961622930777.2499373-UTR-H-paniculata_contig6598:7584..7596Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6598 7585..7596 +
1691481447.4633572-UTR-H-paniculata_contig6598:7584..75961691481447.4633572-UTR-H-paniculata_contig6598:7584..7596Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6598 7585..7596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930777.2713678-CDS-H-paniculata_contig6598:7596..77941622930777.2713678-CDS-H-paniculata_contig6598:7596..7794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 7597..7794 +
1691481447.475399-CDS-H-paniculata_contig6598:7596..77941691481447.475399-CDS-H-paniculata_contig6598:7596..7794Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 7597..7794 +
1622930777.2905788-CDS-H-paniculata_contig6598:8568..88131622930777.2905788-CDS-H-paniculata_contig6598:8568..8813Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 8569..8813 +
1691481447.4863107-CDS-H-paniculata_contig6598:8568..88131691481447.4863107-CDS-H-paniculata_contig6598:8568..8813Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 8569..8813 +
1622930777.309546-CDS-H-paniculata_contig6598:9953..101811622930777.309546-CDS-H-paniculata_contig6598:9953..10181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 9954..10181 +
1691481447.497864-CDS-H-paniculata_contig6598:9953..101811691481447.497864-CDS-H-paniculata_contig6598:9953..10181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 9954..10181 +
1622930777.3274605-CDS-H-paniculata_contig6598:11264..113521622930777.3274605-CDS-H-paniculata_contig6598:11264..11352Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 11265..11352 +
1691481447.5093434-CDS-H-paniculata_contig6598:11264..113521691481447.5093434-CDS-H-paniculata_contig6598:11264..11352Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 11265..11352 +
1622930777.3444746-CDS-H-paniculata_contig6598:12002..121101622930777.3444746-CDS-H-paniculata_contig6598:12002..12110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 12003..12110 +
1691481447.5213525-CDS-H-paniculata_contig6598:12002..121101691481447.5213525-CDS-H-paniculata_contig6598:12002..12110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6598 12003..12110 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6598.14470.1

>prot_H-paniculata_contig6598.14470.1 ID=prot_H-paniculata_contig6598.14470.1|Name=mRNA_H-paniculata_contig6598.14470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
MQFREKSIAKSLSLLSLADMEGMVAQAKFVEEAAVEEEVAVTWPLISAVL
VAVVLQYLVGYNIGVMNAPEPVVFPGHTTAEWATAVAVFAIGGPFGAIVA
GLVSNKNGRRGAIIVNTWTFLVGGLMLTAARNMFWLILARFVTGFACGFA
GVVVPIYLGELAPPTLRGTLGTLTQFAMVIGILASNLMAFPFATLNGWRY
LFAMTPVLAAVELLCMPLIFESPRWLLAHDEFSMRARVAIKKLRGFKNDQ
DVQIEIDHILEASSAQRTSHTSAHSKGAVLDLFTDKRVR
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mRNA from alignment at H-paniculata_contig6598:7585..12110+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6598.14470.1 ID=mRNA_H-paniculata_contig6598.14470.1|Name=mRNA_H-paniculata_contig6598.14470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4526bp|location=Sequence derived from alignment at H-paniculata_contig6598:7585..12110+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGTTAACGGCATGCAATTTCGCGAAAAGAGCATCGCGAAATCTCTCTC TCTGCTGAGTCTCGCAGACATGGAAGGCATGGTTGCCCAGGCCAAGTTCG TGGAGGAAGCAGCTGTGGAGGAGGAGGTGGCGGTAACATGGCCTCTCATC AGCGCTGTCCTTGTCGCCGTTGTGCTGCAGTATCTCGTCGGGTACAACAT CGGTGTCATGGTGGGTTAGTGAGTGGGCTTTGACGTTGCAGTATTAGAGG GGGGAGAGAAGGGAGAATTCAATGTTAAGGTTATGCACATGATTTTATAA CCTTGAGTTATGTAAACGTCTCAGCAAAATCAGATGAATGAGCGAGTACA GTCATAGGTTTCATGCCGATGTAATCTACGTGGTATTTATAAAGCATGAT CATGATCCAGAGTGCATAAGGTGCGCTGCGCTCGCTGTGGTCCCTGTGGA CACGTCGTCCGAAGAGGATTGGATTTGGTGGTATGACAAATGTTTGATTG AGCCGTTGGATTTTTCCAATGATTTGGTTATTAGGTAGCCACGTGTTTCC GAGAAGCAATTTTTTTCATCCTTATTTTTTACTCTACCCGGCGCGCTCAT TTGTACCCCGGTCCCCGATCCCCCACGCCCACTAGGACGACGAATGTTGG ATTTATGTGCGTGCAAAAAATTATTCGAAATCGACACTGTCCTCACCTTT CTCGAGATAGCAGCATACATGTTTGTTTCTTGCTGAATTGAAACATACAC ATGGCACAAGGATAGGTATATGAAGTGCCGAAATTAGAACTTCTCTCCCG TTTAAATCGCAACATATCTAAATATGTTGACATTAAAGTACTGTTGAGTT AACTGGTATGCCTAGCAATGGTTCTAATTGCCGGCTGCACAAAACCTGCT ATGCTTTCCCCATATGAGCGCTATAGATGTACCCCTCTCCCTCAACCCCC CCCATGCGTGTTGTAAAATATCTACGTAACGCAGAACGCTCCCGAGCCGG TCGTGTTTCCCGGACACACAACAGCTGAGTGGGCAACAGCAGTGGCGGTG TTTGCCATCGGAGGGCCTTTCGGGGCCATCGTGGCGGGTTTGGTGTCGAA CAAGAACGGACGAAGAGGTGCTATCATCGTCAACACTTGGACTTTCCTCG TGGGGGGGTTGATGTTGACTGCGGCGCGCAACATGTTCTGGCTCATTTTG GCGAGATTTGTGACCGGCTTCGCATGTGGGTGAGTTTTTTTTATTTCTGA AACGTTCCTGGGGTTCCTCAAACCCGGTCCCCTCCACAACAACCAGTGGC GTTGTGTTGCAAGATCGGAACAGCTTCTGACTTCAGACCCTAGATGATGA CCAGCTCTTCAAGTACAGTACGAAATTCAAGTGCATGCTCCGCACTAAAA ATATACCAAGATTTGGAAACCCCCATATCCTCAAAGTAGGGGGTGTACCC TCGAGAGCCTGTCTCTCCTGGGAGTATCATCTCACTTTTTGCTTCCTTTG TTTGTCATGTATTGTGTAGTCTCGCTGCTGCTGTGTGTGTTTTTTCTTGT TTTTTCTTGTTGCGTGTTGGGAGTGTGTGTGGCTGCGTGCTTCTTCCTGT TTTTATTATTTTTGGGGGGGCGAGCGGAGGAGCATGTGTTCATGTGACGT CTACGCACGCCACACATCGGAGTGATACAGCTATACCGATTGGTGGATTG ACGCAGATGGAAGTGCACTGAAACGTATGCTGTAAAAGCTTATTGAGCCA CATTTGGCAGCGTCGGGAAGAGCGATATAGACGACGCTTAATGGAGCAAA GTTCTGTCCTCTCGAGCACGCTTTTGTCACTGGTGCAACAAATAGGCGTG TAAGACATGAATGCACCCGCGTTGCCCCCTCCCCCCCAATATTGGTCATT TTTTAATTTTGATTAGAAGGAATAGTGTACTTGGGTGACATTTGATATCA GCTGCATAACCTTAAGATGGGTACGATTAGGAGTAATTTTGTGAGCATTT TAGATGTACTACTAACTCTGTGGCAGGTGGGTTTGACCTGTAGCCAGAAC TCTCGCCGGGTGCATGGTGTATGTTGTTTCTGTTGTTTTGTTGATGTGAA TGCTATCATTCCGTGTTAACGTACAGTACACACGCGCGGGGGATGACCAA GGGATATTCCCTTGTAAAGGACGTGGTCTTTGTGGTGACTGGTTGAAGAG GTGCAAAGAGGTGCGGGAAGTCCTGGTGCTCGGATATGATGAGGTCAAGA TGCATGTAATGTGATGCAGGATCCTGTCGACCTACCAAGCAGAATGCCCA AATATCTGTCAAGCCCCCCCCGCGCCGTCTCCGCGTGCACCCCTGCCACC CTTCCCCCCCCTAATTCAGCTTCGCAGGGGTGGTCGTGCCCATTTATCTA GGGGAGCTTGCGCCGCCCACGTTGCGAGGGACGCTTGGCACGCTGACACA GTTCGCCATGGTGATCGGCATTCTGGCTTCCAACCTCATGGCGTTCCCTT TCGCCACTCTGAATGGATGGAGGTATCTATTTGCCATGACCCCTGTGCTC GCGGCTGTGGAGCTTCTGTGTATGCCGCTCATATTTGAGAGTCCCAGGTG AAGGGTGCAGTAGGGTGGTGGTGGTGGTGATGGTGACGGTGGTGCCTTGA ATGATGATGGCGATTACGTGGTGGGTGAAGTAGACTATGTGATGATATAA TAGAGAGGGATGTGTGGGAACACTTGACGGTGGTTTGGATAGGTGCAGCG GAGAACTTGCAATAGTGCATGTGTGTGTTTCTTCGTGGCTTCTGCGGCTT TTATTACAGCTTGACCTTGTCCCTCTCTCAAAAAATCACCTCCTGTGATG AGTGATCGACTAGGATGCAATACTGTCGCGTGTATAAAATTCAATTTTTT TTTTTTCTTTTTTTTTTTCTCCCGGTAACTCCTAGAGACGAGAAACCACA CGTGCTGTATTTATTGATTTAAGACCGAAGCACACGAGTACGTACTCATT GTAAATGTCCGCTTGCTCTGTGCCACAGTAAAGTCAGTTGTGACTGTAGA GTTACTTAACCATGTCGGGGTTTTTTTTGCACTTTAAAAAATTTGAATCC TACTTGCTTTGGCCCACATTTCGCGGAGGTCGACAAGGTCCACCTGGTAC GTGCGCGGTCTCAAAACGAACAACTCGACCGCGAATAGGGGGGCCACATT CTGCACCCTTTTGCGTAGTTTCCCGTAAAAAAACGTTAAAATAGGGGGGG GATGAACACAGGATACTCGAGGTCAGCCTGAACTGGAGCGGCGATTAGTC TTGATACTCAAATCGGAATACACTTCGGAACAGCTAACATGTATTTTATC ACAATTTGTAGGTTCTTCACGGCTCGTGATTTTTCGAAGTTTTGAACCTA TTTTTTTTTTTTTTGTCATATTCCGAGCAGTCTTGGGATCTGGAGATATG ATCTGCCGAACACAAGTGACTTTACTAATAGCACAGAGGAAGTATATATA TATTTTTTCCCTTCCATGACACTCTTGAAAAGGACGACGAGGTATTTCGA TTTTTTTTCAAAACACCGCATCACTTGCAATTTTTTTTCGCAAACGGGAT AAAAAGTAATTTCTCGAAGAGAAATATGTACGATCTGTTTTTGACAAACA ACAATGGAACATGATTGTACGTATCTACAGGTGGCTTTTGGCGCATGACG AGTTTTCGATGAGAGCAAGGGTTGCCATTAAGAAGCTGCGAGGTTTTAAG AACGACCAGGACGTACAGGTATATGCTTTTAGGGTACATAATGGTATATC ATGTTTCGGGTACATATATGTTACGGTGTTTCTACAGCGTGCACCTATCT TTCCGTTTTTTCTAACTTGAATTTCGGTGACCGCTGCGGTGTATACGCTG ACCCTTCATGCTTGTATTGTATAACTGAAAAAAGAGCCGACACAAGTTGA GCACGCCCCTTACACGATTGGGTGATAGCTTGCGCACCTCTGAAGGGTGG AGGTTAATCAATGAAAGTGTTGGAGGATTTTGAAGTGAAGACCGCACGGA GATAGATAAATATTGGAGAATCTCACAAAAACCAAATCGTTCGATTAGAC AGCACAAAGGGAAGGTCCTTCGCACCTTCTTCGCGGAGCACACTACATTC GTAGATGTTGTCAACTTTTGTACTTTTGGAGGATGACGTAGATATTATCA ATCTTTGAAGGTTCTGTGAAGGTGTGTGGGTTTTCTTTTTAAAAATAAAG TGAACGTTCGCTCGAGAGTGCGGTGAAATTTCGACCAAGGAATCGGTTCG AGTGGTACATCCGAAGATGGTGTCGAACGTTTGATGAGTACGCCCGCCTG CCCCCCTTTCTCTGCCCTCTCCCTCCGATGTTGCTGCTGTCGTCTTTGTT GTTGCTTCGTGGCGTAAGATTGAGATTGACCATATCCTTGAAGCATCTAG CGCGCAGAGGACTAGCCATACCAGCGCGCACTCTAAGGGTGCCGTGTTGG ACCTCTTCACTGACAAGCGGGTAAGA
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Coding sequence (CDS) from alignment at H-paniculata_contig6598:7585..12110+

>mRNA_H-paniculata_contig6598.14470.1 ID=mRNA_H-paniculata_contig6598.14470.1|Name=mRNA_H-paniculata_contig6598.14470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at H-paniculata_contig6598:7585..12110+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAATTTCGCGAAAAGAGCATCGCGAAATCTCTCTCTCTGCTGAGTCT
CGCAGACATGGAAGGCATGGTTGCCCAGGCCAAGTTCGTGGAGGAAGCAG
CTGTGGAGGAGGAGGTGGCGGTAACATGGCCTCTCATCAGCGCTGTCCTT
GTCGCCGTTGTGCTGCAGTATCTCGTCGGGTACAACATCGGTGTCATGAT
GCAATTTCGCGAAAAGAGCATCGCGAAATCTCTCTCTCTGCTGAGTCTCG
CAGACATGGAAGGCATGGTTGCCCAGGCCAAGTTCGTGGAGGAAGCAGCT
GTGGAGGAGGAGGTGGCGGTAACATGGCCTCTCATCAGCGCTGTCCTTGT
CGCCGTTGTGCTGCAGTATCTCGTCGGGTACAACATCGGTGTCATGAACG
CTCCCGAGCCGGTCGTGTTTCCCGGACACACAACAGCTGAGTGGGCAACA
GCAGTGGCGGTGTTTGCCATCGGAGGGCCTTTCGGGGCCATCGTGGCGGG
TTTGGTGTCGAACAAGAACGGACGAAGAGGTGCTATCATCGTCAACACTT
GGACTTTCCTCGTGGGGGGGTTGATGTTGACTGCGGCGCGCAACATGTTC
TGGCTCATTTTGGCGAGATTTGTGACCGGCTTCGCATGTGGAACGCTCCC
GAGCCGGTCGTGTTTCCCGGACACACAACAGCTGAGTGGGCAACAGCAGT
GGCGGTGTTTGCCATCGGAGGGCCTTTCGGGGCCATCGTGGCGGGTTTGG
TGTCGAACAAGAACGGACGAAGAGGTGCTATCATCGTCAACACTTGGACT
TTCCTCGTGGGGGGGTTGATGTTGACTGCGGCGCGCAACATGTTCTGGCT
CATTTTGGCGAGATTTGTGACCGGCTTCGCATGTGGCTTCGCAGGGGTGG
TCGTGCCCATTTATCTAGGGGAGCTTGCGCCGCCCACGTTGCGAGGGACG
CTTGGCACGCTGACACAGTTCGCCATGGTGATCGGCATTCTGGCTTCCAA
CCTCATGGCGTTCCCTTTCGCCACTCTGAATGGATGGAGGTATCTATTTG
CCATGACCCCTGTGCTCGCGGCTGTGGAGCTTCTGTGTATGCCGCTCATA
TTTGAGAGTCCCAGCTTCGCAGGGGTGGTCGTGCCCATTTATCTAGGGGA
GCTTGCGCCGCCCACGTTGCGAGGGACGCTTGGCACGCTGACACAGTTCG
CCATGGTGATCGGCATTCTGGCTTCCAACCTCATGGCGTTCCCTTTCGCC
ACTCTGAATGGATGGAGGTATCTATTTGCCATGACCCCTGTGCTCGCGGC
TGTGGAGCTTCTGTGTATGCCGCTCATATTTGAGAGTCCCAGGTGGCTTT
TGGCGCATGACGAGTTTTCGATGAGAGCAAGGGTTGCCATTAAGAAGCTG
CGAGGTTTTAAGAACGACCAGGACGTACAGGTGGCTTTTGGCGCATGACG
AGTTTTCGATGAGAGCAAGGGTTGCCATTAAGAAGCTGCGAGGTTTTAAG
AACGACCAGGACGTACAGATTGAGATTGACCATATCCTTGAAGCATCTAG
CGCGCAGAGGACTAGCCATACCAGCGCGCACTCTAAGGGTGCCGTGTTGG
ACCTCTTCACTGACAAGCGGGTAAGAATTGAGATTGACCATATCCTTGAA
GCATCTAGCGCGCAGAGGACTAGCCATACCAGCGCGCACTCTAAGGGTGC
CGTGTTGGACCTCTTCACTGACAAGCGGGTAAGA
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