mRNA_H-paniculata_contig65299.14382.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: A0A0J8BG93_BETVV (Uncharacterized protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BG93_BETVV) HSP 1 Score: 57.8 bits (138), Expect = 1.470e-9 Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 1 TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIV---IYR 105
++ WRQRG RY +RAGRNLPDKEFR+LRT+IV +YR
Sbjct: 13 SLCWRQRGSRYAIRAGRNLPDKEFRYLRTVIVTAAVYR 50
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: H6SIA9_PARPM (Uncharacterized protein (Fragment) n=2 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIA9_PARPM) HSP 1 Score: 57.0 bits (136), Expect = 4.380e-9 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 10 WRQRGGRYTVRAGRNLPDKEFRFLRTIIV---IYR 105
WRQRG RY +RAGRNLPDKEFR+LRT+IV +YR
Sbjct: 100 WRQRGSRYAIRAGRNLPDKEFRYLRTVIVTAAVYR 134
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: A0A6A5LBS9_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LBS9_LUPAL) HSP 1 Score: 57.4 bits (137), Expect = 1.770e-8 Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 1
Query: 1 TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIV 96
++ WRQRG RY +RAGRNLPDKEFR+LRT+IV
Sbjct: 308 SLCWRQRGSRYAIRAGRNLPDKEFRYLRTVIV 339
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: A0A6A5L965_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L965_LUPAL) HSP 1 Score: 57.4 bits (137), Expect = 1.770e-8 Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 1
Query: 1 TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIV 96
++ WRQRG RY +RAGRNLPDKEFR+LRT+IV
Sbjct: 426 SLCWRQRGSRYAIRAGRNLPDKEFRYLRTVIV 457
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: H6SIE1_PARPM (Putative glycosyl transferase (Glycosyl transferase family 2) n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIE1_PARPM) HSP 1 Score: 57.0 bits (136), Expect = 1.840e-8 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 10 WRQRGGRYTVRAGRNLPDKEFRFLRTIIV---IYR 105
WRQRG RY +RAGRNLPDKEFR+LRT+IV +YR
Sbjct: 219 WRQRGSRYAIRAGRNLPDKEFRYLRTVIVTAAVYR 253
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: A0A381VFD6_9ZZZZ (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A381VFD6_9ZZZZ) HSP 1 Score: 53.9 bits (128), Expect = 1.940e-8 Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 1 TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIV 96
++ WRQ G RY +RAGRNLPDKEFR+LRT+IV
Sbjct: 29 SLGWRQCGRRYAIRAGRNLPDKEFRYLRTVIV 60
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: Q1R3T7_ECOUT (Uncharacterized protein n=2 Tax=Escherichia coli (strain UTI89 / UPEC) TaxID=364106 RepID=Q1R3T7_ECOUT) HSP 1 Score: 52.8 bits (125), Expect = 5.540e-8 Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIV---IYR 105
++ WRQ G Y +RAGRNLPDKEFR+LRT+IV +YR
Sbjct: 29 SLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYR 66
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: A0A090VZ51_PSEVU (Uncharacterized protein n=4 Tax=Enterobacteriaceae TaxID=543 RepID=A0A090VZ51_PSEVU) HSP 1 Score: 52.8 bits (125), Expect = 9.510e-8 Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 1 TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIV---IYR 105
++ WRQ G Y +RAGRNLPDKEFR+LRT+IV +YR
Sbjct: 53 SLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYR 90
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: A0A381WPF1_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381WPF1_9ZZZZ) HSP 1 Score: 52.4 bits (124), Expect = 1.030e-7 Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 7 SWRQRGGRYTVRAGRNLPDKEFRFLRTIIV 96
S RQR GRYT+RAGRNLPDK FR+LRT+IV
Sbjct: 55 SLRQRSGRYTIRAGRNLPDKGFRYLRTVIV 84
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Match: K9IR67_DESRO (Putative conserved protein with signal anchor (Fragment) n=1 Tax=Desmodus rotundus TaxID=9430 RepID=K9IR67_DESRO) HSP 1 Score: 51.2 bits (121), Expect = 2.760e-7 Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 13 RQRGGRYTVRAGRNLPDKEFRFLRTIIVIYRYPCGL 120
RQRG RY++RAGRNLPDKEFR+LR +IV GL
Sbjct: 19 RQRGSRYSIRAGRNLPDKEFRYLRMVIVTTAVYWGL 54 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65299.14382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig65299.14382.1 >prot_H-paniculata_contig65299.14382.1 ID=prot_H-paniculata_contig65299.14382.1|Name=mRNA_H-paniculata_contig65299.14382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp TVSWRQRGGRYTVRAGRNLPDKEFRFLRTIIVIYRYPCGL*back to top mRNA from alignment at H-paniculata_contig65299:561..683+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig65299.14382.1 ID=mRNA_H-paniculata_contig65299.14382.1|Name=mRNA_H-paniculata_contig65299.14382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=123bp|location=Sequence derived from alignment at H-paniculata_contig65299:561..683+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig65299:561..683+ >mRNA_H-paniculata_contig65299.14382.1 ID=mRNA_H-paniculata_contig65299.14382.1|Name=mRNA_H-paniculata_contig65299.14382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=246bp|location=Sequence derived from alignment at H-paniculata_contig65299:561..683+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |