mRNA_H-paniculata_contig6527.14379.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 316 bits (810), Expect = 6.590e-100 Identity = 171/422 (40.52%), Postives = 254/422 (60.19%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSFE 1179
VD+ +P +++ +K+ +AV E + DVKQAF A L+ +VF++L GCG KS ++V+ +A+YG K +GR W + L+ + G Q K+DPCVF K+ VV D ++VAG +C L A+L F GE W+ G A RD+ G + I+Q ++D+++ FDV++ S++PAS D+GP+R++E + PVR A+G+++W+S RPDI+ AVRAVAR AH+P +RHWKA+ KI++YLK T+DLG+ +ERG L L+VYV+A YAD + RRSVSG+ +GG+V+S S TQ V+LS++EAE I + ED++GA A+ +NP S+ SKHI+VRYHFIR L +K+ +Q AD+LTK L + S +
Sbjct: 79 VDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQ 498
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.580e-98 Identity = 176/422 (41.71%), Postives = 263/422 (62.32%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSFE 1179
VD+ +P +++ +K+ +AV E + DVKQA+ A L+ EVF+KL GCG+KS +I + +A+YG K +GR W + L+ + G Q K+DPCVF + VV MI+ +++DD++VAG +C+ L A+L +F GE +W+ G A RD+ G + I+Q ++D++++ FDV++ S +PA+ ADLGP+RE+E+ + PVR A+G+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + RRSVSG+ +GG+VVS S TQ V+LS++EAE I + ED++GA A+ +NP S+G +KHI+VRYHFIR L VK+ +Q AD+LTK L R S +
Sbjct: 816 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQ 1235
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 328 bits (840), Expect = 1.920e-97 Identity = 176/422 (41.71%), Postives = 263/422 (62.32%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSFE 1179
VD+ +P +++ +K+ +AV E + DVKQA+ A L+ EVF+KL GCG+KS +I + +A+YG K +GR W + L+ + G Q K+DPCVF + VV MI+ +++DD++VAG +C+ L A+L +F GE +W+ G A RD+ G + I+Q ++D++++ FDV++ S +PA+ ADLGP+RE+E+ + PVR A+G+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + RRSVSG+ +GG+VVS S TQ V+LS++EAE I + ED++GA A+ +NP S+G +KHI+VRYHFIR L VK+ +Q AD+LTK L R S +
Sbjct: 1195 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQ 1614
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 317 bits (813), Expect = 2.260e-97 Identity = 171/415 (41.20%), Postives = 258/415 (62.17%), Query Frame = 1
Query: 22 APTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSFE 1179
+P +++ +K+ +AV E + DVKQA+ A L+ EVF+KL GCG+KS +I + +A+YG K +GR W + L+ + G Q K+DPCVF + VV MI+ +++DD++VAG +C+ L A+L +F GE +W+ G A RD+ G + I+Q ++D++++ FDV++ S +PA+ ADLGP+RE++ + PVR AVG+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + RRSVS + +GG+VVS S + V+LS++EAE I + ED++GA A+ +NP S+GG KHI+VR+HFIR L + VK+ +Q ADILT+ L R S +
Sbjct: 414 SPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTED-RRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHADILTQALSRASLQ 826
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 328 bits (840), Expect = 2.640e-97 Identity = 176/422 (41.71%), Postives = 263/422 (62.32%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSFE 1179
VD+ +P +++ +K+ +AV E + DVKQA+ A L+ EVF+KL GCG+KS +I + +A+YG K +GR W + L+ + G Q K+DPCVF + VV MI+ +++DD++VAG +C+ L A+L +F GE +W+ G A RD+ G + I+Q ++D++++ FDV++ S +PA+ ADLGP+RE+E+ + PVR A+G+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + RRSVSG+ +GG+VVS S TQ V+LS++EAE I + ED++GA A+ +NP S+G +KHI+VRYHFIR L VK+ +Q AD+LTK L R S +
Sbjct: 1358 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQ 1777
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 327 bits (837), Expect = 5.860e-97 Identity = 175/418 (41.87%), Postives = 261/418 (62.44%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLER 1167
VD+ +P +++ +K+ +AV E + DVKQA+ A L+ EVF+KL GCG+KS +I + +A+YG K +GR W + L+ + G Q K+DPCVF + VV MI+ +++DD++VAG +C+ L A+L +F GE +W+ G A RD+ G + I+Q ++D++++ FDV++ S +PA+ ADLGP+RE+E+ + PVR A+G+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + RRSVSG+ +GG+VVS S TQ V+LS++EAE I + ED++GA A+ +NP S+G +KHI+VRYHFIR L VK+ +Q AD+LTK L R
Sbjct: 1215 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSR 1630
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 296 bits (759), Expect = 1.100e-93 Identity = 173/424 (40.80%), Postives = 242/424 (57.08%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGR--DLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIITM----------------------------YEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSFE 1179
VD E +APTVA S V++ A+ E + + D+KQAF+Q++L+ +VF++L EGCG SG IV+LNK++YG K A R W L L+ +G Q +D CVF L + G V + L VH+DD+ G+ CD L G+L+WY G + RD G + I+Q+T+ + + F VE +P L ++E++ P R +G+L+WL+ RPDIA+AVRAVAR SP + HW+A I+ Y+ RT DLG+ F RG LS+ V+V+ADYA K+ RRSVSG +VM GG +S S TQ CVTLST+EAE +++ +ED++GA +A+NP S SKHI+VR+HFIREL RK + + + Q AD LTK L G FE
Sbjct: 6 VDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLIC-LGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFE 428
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE) HSP 1 Score: 293 bits (750), Expect = 2.460e-92 Identity = 170/423 (40.19%), Postives = 240/423 (56.74%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERG--RDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIITM----------------------------YEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLERGSF 1176
+DF E+FAPTV+ S V++ A+ E + + D++QAF+Q+ L+ +VF++L +GCG SG IV+L K++YG K A R W L LL +G Q +D CVF L + G V MI+ VH+DD+ G+ CD L GEL+WY + RD+ RG + I+Q+ F + + + +E ++P L ENE +D P R VG+L+WL+ RPDIA+AVRAVAR SP HWKA I+ Y++RT +G+ FERG +S+ V+V+ADYA K+ RRSVSG +VM GG V+ S TQ CVTLST+EAE + + +ED++GA +A NP + SKHI+VR+HFIREL RK + + Q AD LTK + + S
Sbjct: 6 IDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELDEDVFMRLPQGCGRLSGLIVKLCKSLYGLKQASRHWHSHLTRCLLL-LGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESL 427
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 301 bits (772), Expect = 8.350e-92 Identity = 163/397 (41.06%), Postives = 243/397 (61.21%), Query Frame = 1
Query: 1 VDFLEVFAPTVAASGVKMEIAVTVENDWGMWQLDVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTS-------EAEIITMYE---------------------------DDEGANAMAENPTSAGGSKHIEVRYHFIREL 1086
VD+ +P +++ +K+ +AV E + DVKQA+ A L+ EVF+KL GCG+KS I + +A+YG K +GR W + L+ + G Q K+DPCVF + VV MI+ +++DD++VAG +C+ L A+L +F E +W+ G A RD+ G + I+Q ++D+++K FDV++ S +PAS DLGP+R++E + PVR A+G+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + RRSVSG+ +GG+VVS S TQ V+LS++ EAE T E D++GA A+ +NP S+G +KHI+VR+HFIR L
Sbjct: 370 VDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQVLDNQGAMALVQNPLSSGRTKHIDVRFHFIRVL 764
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Match: A0A6H5JSK5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK5_9PHAE) HSP 1 Score: 302 bits (774), Expect = 3.480e-91 Identity = 165/390 (42.31%), Postives = 243/390 (62.31%), Query Frame = 1
Query: 100 DVKQAFIQANLEIEVFIKLSEGCGNKSGRIVRLNKAMYGRKHAGRMWS*RLVEVLLNHVGMTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFQATR-GELKWYLGYAFWRDIVRGAVCITQRTFVDTVIKHFDVETESNLPASQQADLGPRRENEDLSDTPVRSAVGNLIWLSGMKRPDIASAVRAVARQAHSPTDRHWKAVAKIISYLKRTKDLGLVFERGRDLSLSVYVEADYADKSNWRRSVSGVIVMLGGSVVSATSTTQHCVTLSTSEAEIIT----------------------------MYEDDEGANAMAENPTSAGGSKHIEVRYHFIRELTARKVSRVKYNKGEDQPADILTKPLER-GSFE 1179
DVKQA+ A L+ EV ++L GCG+KS +IV+ +A+YG K +GR W + + L+ + G Q K+DPCVF N VV +I+ +++DD++VAG +C+ L A+L +F GE +W G A RD+ G I+Q +D+++K FDV++ +PAS DLGP+R++E + PVR A+G+++W+S RPD++ AVRAVAR AH+P RHW A+ KI+ YLK T+DLG+ ++RG L L+VYV+A YAD + + S+SG+ +GG+VVS S TQ V+LS++EAE I +++D++GA A+ +NP S+G +KHI+VRYHFIR L VK+ +Q AD+LTK L R GS E
Sbjct: 445 DVKQAYTHATLDEEVLLRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHVADTLVEN-GFEQCKADPCVFCKMVNEVVVLIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGEREWSDGCAIERDVQAGTFHISQTANIDSMMKRFDVQSTFRIPASPGVDLGPKRDDEKGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-KHSLSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVSAVLSLIAPETSGSSIQVFQDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVGSCE 832 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6527.14379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6527.14379.1 >prot_H-paniculata_contig6527.14379.1 ID=prot_H-paniculata_contig6527.14379.1|Name=mRNA_H-paniculata_contig6527.14379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp MTQSKSDPCVFWLEKNGVVDMILCVHIDDVIVAGKSVECDSLFAALRAEFback to top mRNA from alignment at H-paniculata_contig6527:11263..12525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6527.14379.1 ID=mRNA_H-paniculata_contig6527.14379.1|Name=mRNA_H-paniculata_contig6527.14379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1263bp|location=Sequence derived from alignment at H-paniculata_contig6527:11263..12525- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6527:11263..12525- >mRNA_H-paniculata_contig6527.14379.1 ID=mRNA_H-paniculata_contig6527.14379.1|Name=mRNA_H-paniculata_contig6527.14379.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig6527:11263..12525- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |