mRNA_H-paniculata_contig65198.14370.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: UPI0010A370EF (ubiquitin carboxyl-terminal hydrolase 23 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A370EF) HSP 1 Score: 55.8 bits (133), Expect = 7.110e-8 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKV 126
Y L+ V+VH G + SGHYY Y+RTA+N WY +DD+ VS V
Sbjct: 347 YSLYGVLVHSGSSTHSGHYYCYVRTANNMWYTLDDNRVSHV 387
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A834X400_9FABA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X400_9FABA) HSP 1 Score: 55.5 bits (132), Expect = 9.730e-8 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKV 126
Y L+ V+VH G SGHYY Y+RTA+N WY +DD+ VS V
Sbjct: 413 YSLYGVLVHSGSNTHSGHYYCYVRTANNMWYTLDDNRVSHV 453
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A9V415_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V415_MONBE) HSP 1 Score: 55.1 bits (131), Expect = 1.330e-7 Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVS 120
Y L++V+VH G ++QSGHYY Y+R ++N WY+MDD VS
Sbjct: 453 YRLYAVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVS 491
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A1D1W2X0_RAMVA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W2X0_RAMVA) HSP 1 Score: 55.1 bits (131), Expect = 1.330e-7 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVS 120
Y L+ V+VH G + SGHYYS+IRTA N WY+MDD+ VS
Sbjct: 476 YKLYGVLVHSGGSCHSGHYYSFIRTAVNTWYRMDDNYVS 514
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A2R6PCW9_ACTCC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6PCW9_ACTCC) HSP 1 Score: 55.1 bits (131), Expect = 1.330e-7 Identity = 22/42 (52.38%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 129
Y L++V+VH GL+ SGHYYS++R+A +AWY++DD V++V+
Sbjct: 393 YDLYAVVVHTGLSSTSGHYYSFVRSARDAWYRLDDSKVARVQ 434
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: UPI00125E4F70 (ubiquitin carboxyl-terminal hydrolase 20-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E4F70) HSP 1 Score: 54.7 bits (130), Expect = 1.820e-7 Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 129
Y L++++VH G + SGHYY +IR+A +AWYK DD VS+V+
Sbjct: 296 YCLYAIVVHNGFSSCSGHYYCFIRSASDAWYKFDDSKVSRVR 337
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A6U0XHQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XHQ1_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.820e-7 Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 10 LFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKV 126
L+ V+VH+G+T+ SGHYYSY++ D WY M+D +VS+V
Sbjct: 282 LYGVVVHQGMTVHSGHYYSYVKGTDGQWYLMNDSHVSRV 320
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: UPI0005238C8B (ubiquitin carboxyl-terminal hydrolase 17-like protein 6 n=1 Tax=Chaetura pelagica TaxID=8897 RepID=UPI0005238C8B) HSP 1 Score: 54.3 bits (129), Expect = 2.410e-7 Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVS 120
Y L++V+VH+G T SGHYY YI+ D+ WYKMDD +V+
Sbjct: 252 YKLYAVLVHRGHTCHSGHYYCYIKARDSLWYKMDDSSVT 290
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: UPI00106C56A1 (ubiquitin carboxyl-terminal hydrolase 36-like isoform X1 n=3 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C56A1) HSP 1 Score: 54.3 bits (129), Expect = 2.490e-7 Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 1 PYVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVKL 132
PY L++V+VH G + SGHYY +I+ A+N WY+M+D +V +V L
Sbjct: 370 PYKLYAVLVHCGYSCNSGHYYCFIKAANNHWYQMNDSSVRQVNL 413
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A2G3AFL7_CAPAN (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3AFL7_CAPAN) HSP 1 Score: 53.9 bits (128), Expect = 3.410e-7 Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 4 YVLFSVMVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 129
Y L++V+VH G + SGHYYS+IR+A N WYK DD V +V+
Sbjct: 381 YDLYAVIVHIGFSYSSGHYYSFIRSAPNEWYKFDDSKVVRVR 422 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig65198.14370.1 >prot_H-paniculata_contig65198.14370.1 ID=prot_H-paniculata_contig65198.14370.1|Name=mRNA_H-paniculata_contig65198.14370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=37bp MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVKLback to top mRNA from alignment at H-paniculata_contig65198:82..213- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig65198.14370.1 ID=mRNA_H-paniculata_contig65198.14370.1|Name=mRNA_H-paniculata_contig65198.14370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=132bp|location=Sequence derived from alignment at H-paniculata_contig65198:82..213- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig65198:82..213- >mRNA_H-paniculata_contig65198.14370.1 ID=mRNA_H-paniculata_contig65198.14370.1|Name=mRNA_H-paniculata_contig65198.14370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=222bp|location=Sequence derived from alignment at H-paniculata_contig65198:82..213- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |