mRNA_H-paniculata_contig6519.14369.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: D7G7V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V7_ECTSI) HSP 1 Score: 385 bits (989), Expect = 3.190e-126 Identity = 189/284 (66.55%), Postives = 219/284 (77.11%), Query Frame = 3
Query: 150 SAASVKQISQFDALLAKPPSDEGRA---GANTGANPMRSACKKRQRQSPASEEGVMKVSQLKHPFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQATKRENKGRVGVVRSLEELAERGAVKTERRLNPRQRKAIKKK 992
S+A+ + +A PSD+G+ G GA A KKR R+S A+ HPFPT+Y DHFETPLQAYRDIE ALA LAK L KKR+HLRIWDPYYCAGRTPRLL +LGFP+VEH N+DFYKVV + +QP HDVL+TNPPYSGDHKKRCLEYCRASGKPWFLL+PNYVATKDYY+L+VLG AAG GGEPFYVVP+ KY FDHPEGTGHADSPF VW+ HCG H E +F+ T + +G V V+RSL+EL++ GAV TERRLNPRQRKA+KKK
Sbjct: 50 SSATATTSGTGERTVAGDPSDQGKKRPRGDGAGAAAASLAGKKRPRESLAAPHH--------HPFPTEYGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGPAAGPGGEPFYVVPENKYYFDHPEGTGHADSPFTGVWYVHCGSHTEAVFEGTITQKRGGVSVLRSLDELSQTGAVTTERRLNPRQRKALKKK 325
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A6U0XTY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XTY6_9STRA) HSP 1 Score: 223 bits (567), Expect = 7.820e-65 Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 3
Query: 327 HPFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYV--VPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQATKRENKGRVGVVRSLEELAERGAVKTERRLNPRQRKAIKKK 992
HPF T+Y DHFETPL AY+ + L +AKRLGKK + LRI+DP+YCAG +A LGFPR+ H NEDFY+ +G+ P DVLVTNPPYS DHK+R L +C SGKPW LL+PNYVATK YY ++ +G PF+V +P ++Y + HPEGTGH +SPF ++WF +E+ RV + S+ +L + V+ RRLNPRQRKA K+
Sbjct: 9 HPFSTEYGDHFETPLIAYKHLRPVLCWIAKRLGKKPKELRIYDPFYCAGAVVGRMASLGFPRLIHRNEDFYRCESEGRVPAFDVLVTNPPYSLDHKERILNFCVTSGKPWALLMPNYVATKQYYT-NLTSGGSGAPPTPFFVAPLPGSRYQYTHPEGTGHDNSPFESMWFVDAMAGKKEVMGELSPAEGSRVML--SIADLKQARCVRPGRRLNPRQRKAAAKR 229
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A8J4APU4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4APU4_9CHLO) HSP 1 Score: 220 bits (561), Expect = 1.970e-62 Identity = 106/238 (44.54%), Postives = 144/238 (60.50%), Query Frame = 3
Query: 330 PFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQATKRE-------------------NKGRVGVVRSLEELAERGAVKTERRLNPRQRKAIK 986
PF DY DHFE+PLQA +DIE L L+ +L K + L ++DPY+C G + +LGF H N DFYK V+ G P +D+LVTNPPYS DHK+R LE+C SGKPW LL+PNYVATK Y+ + + PF++ P +Y ++HPEGTGHA+SPFF++W+ G + E I++A K + RV V R+++ L + AV T RRLNP+QR +K
Sbjct: 108 PFRVDYNDHFESPLQAVQDIEPVLQLLSIKLKKSKSSLTVYDPYFCQGGIRQHYEQLGFKNFIHRNRDFYKDVDSGNVPSYDILVTNPPYSSDHKERILEFCLRSGKPWALLLPNYVATKAYFSELLDSVSTPAAQRPFFLTPQARYSYEHPEGTGHAESPFFSIWYIGLGEYTETIYKACKARLEPQSNGSSIQSEAAAGLGGRWRVSVARTVDALKQAKAVPTARRLNPKQRARMK 345
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A7R9V2F9_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V2F9_9CHLO) HSP 1 Score: 212 bits (539), Expect = 9.360e-60 Identity = 102/226 (45.13%), Postives = 139/226 (61.50%), Query Frame = 3
Query: 330 PFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYK--LSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIF----QATKRENKGRVGVVRSLEELAERGAVKTERRLNPRQRKAIKK 989
P+PTDY DHFET +A D+E AL LA LGK + L ++DPYYC G + ++G R+ H DFY V+ G P +D+LVTNPPYSGDHK+R L++C SGK W LL+PNYVATK Y+ S L EPF++VP KY + HPEGTGH+ SPFF++W+ H + + + ++ ++RS+ EL E V T +R NP+QRK ++K
Sbjct: 82 PYPTDYLDHFETSKEAIADLEPALYRLATHLGKPKSELVVYDPYYCKGTIRQHWEQIGVKRLIHEKRDFYADVKSGSVPEYDILVTNPPYSGDHKERILQFCMESGKAWALLMPNYVATKLYFTSIASTLLQQESFSAEPFFLVPTIKYDYVHPEGTGHSSSPFFSIWYIHMANDTKRVLAWWDKLLSKKGTSSARLLRSVSELQESQCVPTGKRPNPKQRKKMRK 307
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A2J8ADG8_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ADG8_9CHLO) HSP 1 Score: 213 bits (541), Expect = 2.290e-59 Identity = 110/253 (43.48%), Postives = 147/253 (58.10%), Query Frame = 3
Query: 318 QLKHPFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIF---------------QATKRENKGRVG---------VVRSLEELAERGAVKTERRLNPRQRKAIKKKFKLG 1004
+L PF DY DHFET +A +DI L L+KRL K L ++DP+YCAG A LG + H N DFY V+KG P +D+LVTNPPYSGDHK+R LE+C SGKPW LL+PNYVATK Y+ A+ PF++ P +Y +DHPEGTGH +SPFF++W+ G H E ++ A +R+ G + RS++ L + AV T +RLNP+QRK +K+K + G
Sbjct: 115 ELSWPFAADYNDHFETDFRAVQDILPVLQQLSKRLCKPLSELAVYDPFYCAGGVRAHYAALGITKFIHRNRDFYDDVKKGALPSYDILVTNPPYSGDHKERILEFCLRSGKPWCLLMPNYVATKAYFGQLQDAASTPPLQRPFFLTPHARYSYDHPEGTGHTESPFFSIWYVCLGAHTEGVYGSCRSRLDAAPAAGGAADQRQGGAPAGXXXAAWGVALARSVDALRQAKAVPTGKRLNPQQRKRLKQKMQPG 367
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A835Y0N0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0N0_9CHLO) HSP 1 Score: 217 bits (552), Expect = 3.340e-59 Identity = 110/256 (42.97%), Postives = 141/256 (55.08%), Query Frame = 3
Query: 330 PFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQATKRENKGR----------------------------------VGVVRSLEELAERGAVKTERRLNPRQRKAIKKKF 995
PF DY DHFETP+QA RD++ L AL RLGK L ++DP++C G R LG+ H DFY VE G P +DVLVTNPPYS DHK+R LE+C SGKPW LL+PNYVATK Y+ + + PF++ P T+Y ++HPEGTGHA+SPFF++W+ G H E +FQA + V + R +E L GAV T RR NPRQR+ IK++
Sbjct: 266 PFEVDYNDHFETPIQAVRDLQPVLTALCGRLGKSPAQLAVYDPFFCQGGIRRHFEALGYTNFIHRKRDFYADVEAGNLPKYDVLVTNPPYSEDHKERILEFCLRSGKPWALLMPNYVATKAYFAELLDATSTPAPQRPFFLTPHTRYEYEHPEGTGHAESPFFSIWYVGLGPHTEPVFQACRARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWGVDLARGVEHLKAAGAVPTARRPNPRQRRKIKEQM 521
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A835SNK2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SNK2_CHLIN) HSP 1 Score: 213 bits (543), Expect = 3.620e-59 Identity = 111/253 (43.87%), Postives = 145/253 (57.31%), Query Frame = 3
Query: 309 KVSQLKHPFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQA--TKRENKG----------------------RVGVVRSLEELAERGAVKTERRLNPRQRKAIKKKF 995
+VS + PF DY DHFET A DI+ L AL KRL K L ++DP++C G R GF H DFY VE G+ P +D++VTNPPYS DHK+R L++C SGKPW LL+PNYVATK YY V A PFY+ P T+Y ++HPEGTGHA+SPF+++W+ G H E ++ A TK ++ G V + RS++ L E AV T +RLNP+QR +KKK
Sbjct: 154 RVSSDEWPFEVDYNDHFETSAAAVDDIQPVLLALCKRLKKTPAQLAVYDPFFCQGGIRRHYTARGFTNFIHRKRDFYADVESGQLPEYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYYSELVDEAGTPPQQRPFYLTPVTRYAYEHPEGTGHAESPFYSIWYVGLGAHTEAVYGACRTKLDSPGPAAAXXXXXXXXXXXXXXXXSWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKM 406
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A835SR82_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SR82_9CHLO) HSP 1 Score: 207 bits (527), Expect = 1.310e-57 Identity = 108/254 (42.52%), Postives = 141/254 (55.51%), Query Frame = 3
Query: 309 KVSQLKHPFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQATKRE----NKGR---------------------VGVVRSLEELAERGAVKTERRLNPRQRKAIKKKF 995
+VS PF DY DHFET A DI+ L AL KRL K L I+DP++C G R GF H DFY V G+ P +D++VTNPPYS DHK+R L++C SGKPW LL+PNYVATK YY + A PFY+ P T+Y ++HPEGTGHA+SPF+++W+ G+H E ++ A + G V + RS++ L E AV T +RLNP+QR +KKK
Sbjct: 89 RVSSDDWPFEVDYNDHFETSSAAVDDIQPVLTALCKRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVANGQLPAYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYYAELIEAAGTPPQQRPFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGQHTEAVYGACRTRLDLSTSGAAAAASXXXXXXXXXXXXXGWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKM 342
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A0A7S1IGA0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGA0_9EUGL) HSP 1 Score: 204 bits (518), Expect = 1.050e-56 Identity = 104/227 (45.81%), Postives = 143/227 (63.00%), Query Frame = 3
Query: 312 VSQLKHPFP-TDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQATKRE--NKGRVGVVRSLEELAERGAVKTERRLNPRQRKAI 983
V+ L++P+ +Y DHFET QAY+DI L A+ + + L I+DP+YC G R LA LGF V H DFY V+ G+ P HD+L+TNPPYSGDHK+R LEYC ASGKPW LL+PNY+ATK+YY+ ++ A EPFY V +Y F HPEGTGH SPF WF + G H E ++Q + + + R++++L ++ V R +NP++RKA+
Sbjct: 85 VTSLEYPWEDVEYGDHFETCDQAYKDITPLLKEAARLMQRDASSLGIYDPFYCDGAVKRHLAALGFHTVHHEKRDFYADVKNGQVPEHDILITNPPYSGDHKERILEYCCASGKPWALLLPNYIATKNYYQSTL----AKHKQEPFYFVSRERYMFYHPEGTGHDTSPFEGFWFLYLGPHTEHLYQWSVQNLPRSSYKALTRTVDDLLQKRLVPAPR-MNPKRRKAL 306
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Match: A8JDY5_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JDY5_CHLRE) HSP 1 Score: 206 bits (524), Expect = 1.990e-56 Identity = 112/266 (42.11%), Postives = 143/266 (53.76%), Query Frame = 3
Query: 309 KVSQLKHPFPTDYCDHFETPLQAYRDIEEALAALAKRLGKKRQHLRIWDPYYCAGRTPRLLARLGFPRVEHHNEDFYKVVEKGKQPPHDVLVTNPPYSGDHKKRCLEYCRASGKPWFLLIPNYVATKDYYKLSVLGAAAGLGGEPFYVVPDTKYPFDHPEGTGHADSPFFAVWFAHCGRHNEEIFQA--TKRENKGR-----------------------------------VGVVRSLEELAERGAVKTERRLNPRQRKAIKKKF 995
+VS PF DY DHFET A DI+ L AL RL K L I+DP++C G R GF H DFY VE G+ P +DV+VTNPPYS DHK+R L++C SGKPW LL+PNYVATK YY V A PFY+ P T+Y ++HPEGTGHA+SPF+++W+ G H E ++ A TK ++ G V + RS++ L E AV T +RLNP+QR +KKK
Sbjct: 142 RVSSDDWPFEVDYNDHFETSSAAVDDIQPVLLALCNRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVESGQLPEYDVMVTNPPYSADHKERALDFCLRSGKPWALLLPNYVATKAYYSELVDAAGTPPQQRPFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGVHTEAVYGACRTKLDSAGAAAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKM 407 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6519.14369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6519.14369.1 >prot_H-paniculata_contig6519.14369.1 ID=prot_H-paniculata_contig6519.14369.1|Name=mRNA_H-paniculata_contig6519.14369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=335bp MEEDGGTLRTEARAKKRRKINNKKKKRRNQTTQTPSAASVKQISQFDALLback to top mRNA from alignment at H-paniculata_contig6519:9399..12439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6519.14369.1 ID=mRNA_H-paniculata_contig6519.14369.1|Name=mRNA_H-paniculata_contig6519.14369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3041bp|location=Sequence derived from alignment at H-paniculata_contig6519:9399..12439- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6519:9399..12439- >mRNA_H-paniculata_contig6519.14369.1 ID=mRNA_H-paniculata_contig6519.14369.1|Name=mRNA_H-paniculata_contig6519.14369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2010bp|location=Sequence derived from alignment at H-paniculata_contig6519:9399..12439- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |