prot_H-paniculata_contig636.14160.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig636.14160.1 vs. uniprot
Match: A0A6H5K2G0_9PHAE (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G0_9PHAE) HSP 1 Score: 303 bits (777), Expect = 2.640e-83 Identity = 397/1194 (33.25%), Postives = 506/1194 (42.38%), Query Frame = 0
Query: 12 KIFELQSALLEEGV---TEALLHECTLWFRPNHLQDIVTERSEAEGICGWPGCRKSLPSWGLAAARVFD---GVESGRFCCKVCMSKTTVLLAAIPSTSPYSREGVLRVACPSMFEKPAGNSE------HGATGDGAKKVYKRARRRD---------------------ILPAKRAESTNGNRQKNN------------VGPSSRAITGACEAPIAGAVEDGRRERKEGETGAGREDDSMDLVRGGIARVSIA-------------NSDPVEEKQNEESSKPSLSTLIRPEVPSAVPVASSSVALVGGRPPGMEASAAAAAAGNVKSLGGAAVISKEHSSVTRS-SDWGNVSFVPKSGPGS---------TVALHAMLAAAAAARPSLGVVEASXXXXXXXXXXXXXXXXXXXXXXXXVVVVTAPSQQQSESSPKIKPGGDQTRTTHESTTGSGVQQGKMSMVSLEPQSHSNKKGVS--FAAGTKASPPDTAALTASLLPRRTGLGTGXXXXXXXXXXXXXXXXXXXXXGSTGKPKPMHQKP--------------KAVLGAVMEKTPAVPIPM-MHTGSAGAGQSTGSEGGRVEGHLPRIQADLSFRVMPRGYEKDMKQDDDNGDGDGDDMVRAAGCYKGGEQ------------------ENGEDSNDXXXXXXXXXXXXXXXX-------DRAIWRETFGEEMPTDVAEGPWIDMDAIHDKAMREEFATTIGAFPLLWDALSEWVTPATRAVCRAGRAAAAAGTCPSAVKLENLTTASVVTAEAETERDSSKPDKTAALGAPNECPCSSECKGRSEKLPPSTTVVSTDCDAG----VSMD--VRKAATVAEAIEREARRHA---RGIGKA--------GKVGVSVDGGGGEVSAGVTITGALRHSSISAMVNVHLPQAEQALRAAV----VRRGEEDRDTE-GWQQSTSVQGKGARKANFRTFVWSNKKASPETTLMTPRAGLWVEAVADVPTAV---------------------VEQAHVRTERPAATCPEKNARYIGSGLV------RTGVGVKLAGSTNGVVKGRKGGGVAAAG------GTECRRAVATVIDTFD----GARTAGAVNLSIAQWKIVPVVLLAVLGLGDGAVGDGGGRS---GTDSSVCVAGDGVAGAEACAQICGPGVALSSREFELLMEVLLQD 1033
+IFELQS+LL E V EALL EC WF P HLQDIV ERSEAEG CGWPGC K LPSW LAA VFD G + GRFC + CM+KT V ++AIP T PY+RE ++R+ACP A S HGA G GAKKVYKRARRRD ++ E +RQ+ P +A G A AV D K E G ++ D+ G R ++ + + ++ S+S E + S+ V A+ NV+ + + + T S + W +V F SG S V+ HA LAAA A ++ S PS + P + GG ++ ++ FA GT XXXXXXXXXXXXXXXXXXXXX K+VLG V+E+ P+VP PM + G G + G VEGHLP+I+ADLSFRVMPRG G G G + AAG G E+ + ED + XXXXXXXXXXXX DRAIWRETFGEEMP +V+ G WIDMDA+ DK MREEFA++I F LLW ALSEWV+P TRAVCRAGRAA L++A R SS+ AA A + ++ C SE+ P + S+ G V D RKA VAEAIE E RHA R KA G S GGG V G T+TGALRH+ +S MVN+HL AE+AL AA VR G G G+ + + +VWS+ A P G WVE + PTA ++ + PA + R + +AG G + AAAG G ECRRAV+ VIDT + A +A A +LSIAQWK+V VVLL +GLG G G + + AEAC+++CG + +S+REF +L++V+L++
Sbjct: 11 QIFELQSSLLAEDVGEIDEALLRECAAWFCPQHLQDIVIERSEAEGRCGWPGCSKKLPSWRLAAPLVFDLPEGEQLGRFCERACMAKTKVFMSAIPPTPPYTRENLVRLACPPPAPSSAEGSTSVNGDGHGAAGAGAKKVYKRARRRDLPXXXXXXXXXXXXXXXXXGSVVADNAGEGAGVDRQEGGSEKGAGEEAPALAVPEKQAAAGEAVASSPAAVSD-----KGDEERVGTPAEASDIASGSSGRXXXXXXXXXXXXXXXXXDASGEDATASIRAALESVSIYAEEEDACSAAATSAPVDAAXXXXXXXXXXXPASDVANVREVASTTAVKAPAPAPTPSRTAWESVRFSRPSGSSSGGGGRCSASVVSRHASLAAAVAETATMDADNYS------------------------------PS---GGTVPDARSGGVKSFSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKSVLGGVVERAPSVPAPMEVRVGGRARGGA-----GAVEGHLPKIEADLSFRVMPRGGYP--------GVGGGGGLGFAAGGQAGVEEAKDAREFGLGVDGGPLTADEFEDEKEMEEVXXXXXXXXXXXXXXXXXENDRAIWRETFGEEMPAEVSSGSWIDMDAVRDKEMREEFASSIAPFALLWSALSEWVSPETRAVCRAGRAAXXXXXXXXXXXXXPLSSAGKAKTSGVNGRSSSEIGDVAAEPASSPAITAASCCDVSEQSPRIDSSHSSSASPGHFGSVPADFLARKAGAVAEAIEAEMSRHAKRNRDRRKANPNDSPMKGTGDSSARGGGTTVGEGPTLTGALRHTGVSTMVNMHLALAERALIAAATTLHVRGGXXXXXXXXGCSGILQTSGQHNNMRSRKKWVWSDTAAGARQGARVP--GGWVEK--EGPTAAXXXXXXXXXXXXXXXXXXXXKAKEGTTGDDVPAVATASGTGTTVSGKHADAETNQRESPAISVAGRQTGKAPAAEPAAAAAAGEHVAGGGAECRRAVSAVIDTLNVAAGSASSATAADLSIAQWKVVSVVLLTAVGLGTGXXXXXXXXXXXXGAAAPRVTGEEAEVAAEACSRLCGEEMGVSAREFRILVDVMLEE 1149
BLAST of mRNA_H-paniculata_contig636.14160.1 vs. uniprot
Match: D8LG47_ECTSI (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG47_ECTSI) HSP 1 Score: 246 bits (627), Expect = 1.220e-64 Identity = 342/1107 (30.89%), Postives = 437/1107 (39.48%), Query Frame = 0
Query: 4 DIKRKIDSKIFELQSALLEEGV---TEALLHECTLWFRPNHLQDIVTERSEAEGICGWPGCRKSLPSWGLAAARVFD---GVESGRFCCKVCMSKTTVLLAAIPSTSPYSREGVLRVACPSMFEKPAGNSEHGATGDGAKKVYKRARRRDILPAKRAESTNGNRQKNNVGPSSRAITGACEAPIAGAVEDGRRERKEGETGAGREDDSMDLVRGGIARVSIANSDPVEEKQNEESSKPSLSTLIRPEVPSAVPVASSSVALVGGRPPGMEASAAAAAAGNVKSLGGAAVISKEHSSVTRSSDWGNVSFVPKSGPGSTVALHAMLAAAAAARPSLGVVEASXXXXXXXXXXXXXXXXXXXXXXXXVVVVTAPSQQQSESSPKIKPGGDQTRTTHESTTGSGVQQGKMSMVSLEPQSHSNKKGVSFAAGTKASPPDTAALTASLLPRRTGLGTGXXXXXXXXXXXXXXXXXXXXXGSTGKPKPMHQKPKAVLGAVMEKTPAVPIPM-MHTGSAGAGQSTGSEGGRVEGHLPRIQADLSFRVMPRGYEKDM--KQDDDNGDGDGDDMVRAAGCYKGG-EQENGEDSNDXXXXXXXXXXXXXXXXDRAIWRETFGEEMPTDVAEGPWIDMDAIHDKAMREEFATTIGAFPLLWDALSEWVTPATRAVCRAGRAAAAAGTCPSAVKLEN--LTTASVVTAEAETERDSSKPDKTAALGAPNECPCSSECKGRSEKLPPSTTVVSTDCDAG------VSMDVRKAATVAEAIEREARRHARGIGKAGKVGVS-----------VDGGGGEVSAGVTITGALRHSSISAMVNVHLPQAEQALRAAVVR---RGEEDRDTEGWQQSTSVQGKGARK--ANFRTFVWSNKKASPETTLMTPRAGLWVEAVADVPTAVVEQAHVRTERPAATCPEKNARYIG---------SGLVRTGVGVKLAGSTNG------VVKGRK--------------GGGVAAAGGTECRRAVATVIDTFDGA----RTAGAVNLSIAQWKIVPVVLLAVLGLGDGAVGDGG----------GRSGTDSSVCVAGDGVAGAEACAQICGPGVALSSREFELLMEVLLQD 1033
++KRKIDSKIF+LQS+LL E V EALL EC WF P HLQDIV ERSEAEG CGWPGC LPSW LAA VFD G + GRFC + CM+ P+S A A + P+ + +G G E + L R V + + ++ P P+ VPV S R D + RP L +++ PS + K + R ++T SP + + R XXXXXXXXXXXXXXXXXXXXX KP K+VLG V+E+ P+VP PM + G G + G VEGHLP+I+ADLSFRVMPRG + + A G + G + G + D XXXXXXXXXXD AIWRETFGEEMP +V+ G WIDMDA+ DK MREEFA++I F LLW ALSEWV+P TRAVC+AGRAA L +A R S+ AA A + + C SE+ P + S+ G RKA VAEAIE E RHA+ K + GGG V G T+TGALRH+ +S MVN+HL QAE+AL AA RG +S +Q G + + ++WS+K P + E AV +A PA + N G SG T G TN ++GR+ G A GG ECRRAVA VIDT + A +A A +LSIAQWK+V VVLL +GLG GA+G G +G ++ V AEACA++CG + +S+REF +L++V+L++
Sbjct: 8 EVKRKIDSKIFQLQSSLLAEDVGEIDEALLRECAAWFCPQHLQDIVIERSEAEGRCGWPGCGNKLPSWRLAAPLVFDLPEGEQLGRFCERSCMADP--------------------------------------------------------------------------PASTATVMAPQEPVP----------RRSTSGPGEE--TSPLPRSAYLLVVVLLLQQI---------------VLLPITPARVPV-----------------------------------------STARREDRRRAPVKKR-------------------RPLL-------------------------FQGSKLLMERPPSLPRPRFLTKAETTSAWERRQRQAT----------------------------------SPTAAVVVEKAWQQARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPAAAARKSVLGGVVERAPSVPAPMEVRVGGRAQGGA-----GAVEGHLPKIEADLSFRVMPRGGYPGVGGXXXXXXXXXXXXXVEEAKGAREYGLGVDGGPLTADEVEDEKXXXXXXXXXXDGAIWRETFGEEMPAEVSSGSWIDMDAVRDKEMREEFASSIAPFALLWSALSEWVSPETRAVCQAGRAAXXXXXXXXXXXXXXSPLPSAGKAKTGGVNGRSLSEIGDVAAEPAGSPAITGASCCDVSEQGPRIDSSHSSSASPGHLGPVPADFQARKAGAVAEAIEAEMSRHAKRNRDRRKANANDSPNKGTGDSCARGGGATVGEGPTLTGALRHTGVSTMVNMHLAQAERALIAAAPTLHVRGGXXXXXXXXGRSGILQTSGQHNNVGSRKKWIWSDKATGARQGARVPGGWVEEEGATAAAAAVAAEAVPLKAPPAGGVCKANGETTGDDVPAVATASGTGTTARGENADAETNQRESSAVALEGRQTREAPAAEPAAAAAAGEHVAGGGAECRRAVAAVIDTLNAAVGSASSATAADLSIAQWKVVSVVLLTAVGLGAGAIGXXXXXXXXXXXAPGVTGEEAEVA--------AEACARLCGAEMGVSAREFRILVDVMLEE 881
BLAST of mRNA_H-paniculata_contig636.14160.1 vs. uniprot
Match: A0A835YJQ0_9STRA (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.110e-6 Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 614 GPWIDMDAIHDKAMREEFATTIGAFPLLWDALSEWVTPATRA 655
GPW+D+DA+HDK REEF ++ +F LW AL+EWVTP TRA
Sbjct: 484 GPWLDLDALHDKRAREEFRASLSSFITLWGALAEWVTPETRA 525 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig636.14160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig636.14160.1 ID=prot_H-paniculata_contig636.14160.1|Name=mRNA_H-paniculata_contig636.14160.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1034bpback to top |