prot_H-paniculata_contig6359.14158.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6359.14158.1
Unique Nameprot_H-paniculata_contig6359.14158.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length686
Homology
BLAST of mRNA_H-paniculata_contig6359.14158.1 vs. uniprot
Match: D8LJR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR8_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 7.220e-51
Identity = 212/601 (35.27%), Postives = 282/601 (46.92%), Query Frame = 0
Query:    1 MVRG-LDEPEKDPSLFPESRVRPWVLDDAAELKVQDMRDEFEKTLTFVSPVKEGLEKSLLDRMVPEDKRCHMFLEELARLKVDRAAADRRKASGKWVIQPIGEVFEDLSRETHGLSPKAKQKSVIDCS-TEGLRSEESIRATDEGNSELEQERQDVETMEIGG------HGG--------LAEDSDVARLVDLLHK--VDSEFCTSSEAGSEIGSSQNSHDSGTESRV------------EEETDERGQCA------DGRNGGGVGRCELGDLEHDAADEGLVSGDAANSQSNGRERNAGGSRSTEGRQAIKNQQEEPSRIQQTDAQHLTQQXXXXXQPHGRIDISRMKIDGTERGKVVGP--RPRSAPSTCLSAGGFSQLSR--TSSSHLARTVSQKLLQAEREVAQLKSLDAK-----------------EVVPAPPLLAIAEPGVGIDTVKQNADALQASKAVKRTSYLKGYRPRTTKWPARDTDAQDVSDAGRKGVSSM--LYSLSVENEGSAVTRKQRSITAGNRRR--NRTRLVVVGGSRSTTLLTRTERDFVFGK-TASAVVPATSAATGADGI-QPTSYRPPSARYTTPGKML 538
            M +G +D+PE+DP+LFPE RVRPWV+DD AE K++++RD+ E+TLT +SPVKEG+ +S+LDR +  D    +F +ELA L+    A      SG   + PIGE+FEDL RETHGL P+ +  + +     EG    E I     G  E+E        +  GG      H G        LA D DV RL+  L    VD   C S  + +E+G                          +  TD+ GQ A      DG NG  +   E    +H A  E   S +AA          AG  R++  R     +   P  ++                   R+DISRMKIDG       GP  RPRSAPS CLSAGGFS+LS   +SSS LAR VSQ+L++A REV   ++ +A+                  + P+     IA+    ID VKQNA+ALQAS +VKRT YL   +PR  +W  RD D       G +G  S     S S     +AV ++ ++  A NRR   +  R      +    LL   E +F+FG  TA  VV A              S R PS R TT G+ML
Sbjct:    1 MAKGDVDDPEEDPALFPERRVRPWVVDDDAERKMEELRDDLERTLTSISPVKEGMGESILDRTLRSDNSGELFFKELASLEAKDRAKVAGVTSGCVSLYPIGEIFEDLYRETHGLPPRNQNHAYVQHEGDEGNCRPEEIH----GAPEVESSAPPAAAVRKGGGRGSRGHDGGGGEGCCELATDPDVVRLLAELQAGLVDDPNCCSDGSDAELGGEGKXXXXXXXXXXXXXXXXXXXXXGDRXTDQEGQEAAGDETKDGTNGPRLASEE----QHPAGGE---SAEAA----------AGKERASSPRGG---EHHNPEVVR-------------------RVDISRMKIDGG------GPQARPRSAPSACLSAGGFSRLSSRASSSSRLARAVSQRLMEATREVEGQRAPEAQGGGGDCDRGAGRGEATGRLRPSTSASRIAQADERIDVVKQNAEALQASMSVKRTRYLNSRKPRAARWSPRDRDLP----LGPRGQPSAPRAASHSAAPPPAAVRQRPKTAVAKNRRPRPHNNRGHAGNTNNGNPLLNHRETEFLFGAGTAPEVVAAXXXXXXXXXXXDDVSRRAPSLRKTTLGRML 548          
BLAST of mRNA_H-paniculata_contig6359.14158.1 vs. uniprot
Match: A0A6H5KY38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY38_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.010e-35
Identity = 174/514 (33.85%), Postives = 231/514 (44.94%), Query Frame = 0
Query:   33 VQDMRDEFEKTLTFVSPVKEGLEKSLLDRMVPEDKRCHMFLEELARLKVDRAAADRRK----ASGKWVIQ-PIGEVFEDLSRETHGLSPKAKQKSVI-DCSTEGLRSEESIRATDEGNSELEQERQDVETMEIGGHGG------------LAEDSDVARLVDLLHK--VDSEFCTSSEAGSEIGSSQNSHDSGTESRVEEETDERGQCADGRNGGGVGRCELGDLEHDAADEGLVSGDAANSQSNGRERNAGGSRSTEGRQAIKNQQEEPSRIQQTDAQHLTQQXXXXXQPHG-----RIDISRMKIDGTERGKVVGPRPRSAPSTCLSAGGFSQLSR--TSSSHLARTVSQKLLQAEREVAQLKSLDAK-----------------EVVPAPPLLAIAEPGVGIDTVKQNADALQASKAVKRTSYLKGYRPRTTKWPARDTDAQDVSDAGRKGVSSMLYSLSVENEGSAVTRKQRSITAGNRRR--NRTRLVVVGGSRSTTLLTRTERDFVFG 500
            ++++RD+ E+TLT +SP+KEG  +S+LDR +  D    +F +ELA L+    A DR K    A G  V Q PIGE+FE+L RETHGL P+ +  + + D   EG    E      E  S        V   + GG G             LA D DV RL+  L    VD   C S  + +E+G              E +             G     + GD   D   +   +GD  N  +NG             R A + Q                  XXXXX  H      R+DISRMKIDG +       RPRSAPS CLSAGGFS+LS   +SSS LART+SQ+L++A REV   ++ +A+                  + P+     IA     ID VKQNA+ALQAS +VKRT YL   +PR  +W  RD D    S     G      S S     SAV  + ++  A NRR   + +R      +    LL R E +F+FG
Sbjct:    1 MEELRDDLERTLTSISPIKEGTSESILDRTLRSDNSGELFFKELASLE----AKDRTKVAGVAPGGCVSQYPIGEIFENLYRETHGLPPRKQNHAYVQDDGDEGNSRPEEHHGVPEVESSAPPA---VAVRDEGGRGSRHHDGGGEGYCELAADPDVVRLLAQLQAGLVDDPNCCSDGSDTEVGG-------------EGKXXXXXXXXXXXXXGKKRETDEGDRGADQGGQEEAAGDETNDGTNGP------------RLASEEQHPXXXXXXXXXXXXXXXXXXXXXXXHNPKVVRRVDISRMKIDGID----PQARPRSAPSACLSAGGFSRLSSRASSSSRLARTMSQRLMEATREVEGQRAPEAQGGGVDCGRGAGRGEAAGRLRPSTSASRIALAEERIDVVKQNAEALQASMSVKRTRYLNSRKPRAARWSPRDRDLPVGSRGQPSGT--RAASRSGAPPPSAVRERPKTAVAKNRRHCPHNSRGHAGNTNNGNPLLNRRETEFLFG 476          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6359.14158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJR8_ECTSI7.220e-5135.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY38_9PHAE3.010e-3533.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..372

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6359contigH-paniculata_contig6359:6576..11546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6359.14158.1mRNA_H-paniculata_contig6359.14158.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6359 6324..12188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6359.14158.1 ID=prot_H-paniculata_contig6359.14158.1|Name=mRNA_H-paniculata_contig6359.14158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=686bp
MVRGLDEPEKDPSLFPESRVRPWVLDDAAELKVQDMRDEFEKTLTFVSPV
KEGLEKSLLDRMVPEDKRCHMFLEELARLKVDRAAADRRKASGKWVIQPI
GEVFEDLSRETHGLSPKAKQKSVIDCSTEGLRSEESIRATDEGNSELEQE
RQDVETMEIGGHGGLAEDSDVARLVDLLHKVDSEFCTSSEAGSEIGSSQN
SHDSGTESRVEEETDERGQCADGRNGGGVGRCELGDLEHDAADEGLVSGD
AANSQSNGRERNAGGSRSTEGRQAIKNQQEEPSRIQQTDAQHLTQQQQQQ
QQPHGRIDISRMKIDGTERGKVVGPRPRSAPSTCLSAGGFSQLSRTSSSH
LARTVSQKLLQAEREVAQLKSLDAKEVVPAPPLLAIAEPGVGIDTVKQNA
DALQASKAVKRTSYLKGYRPRTTKWPARDTDAQDVSDAGRKGVSSMLYSL
SVENEGSAVTRKQRSITAGNRRRNRTRLVVVGGSRSTTLLTRTERDFVFG
KTASAVVPATSAATGADGIQPTSYRPPSARYTTPGKMLGHVAPAADATTS
RRRYQTRKPGYDCSANSRVGGRRACSSSLGGSVMPKHVNSRRGGKMVRTR
PTSAVPSDQGRSSVAFTTSPSREAKSSRSTEKRASQPLGSREESFRSSGC
PWIENVVQSGTTLVDPSPAPDVLVEERSGHVEEAD*
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