prot_H-paniculata_contig62633.14024.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62633.14024.1
Unique Nameprot_H-paniculata_contig62633.14024.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A438BR65_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BR65_VITVI)

HSP 1 Score: 66.2 bits (160), Expect = 2.630e-12
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +PK ++EA  SL+   WQ A E E++ +  N VWT VE  K+   +    +YK+KI  +GKVE YK RLVA GYRQ
Sbjct:   16 DPKNYEEAMQSLDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGANGKVETYKARLVAKGYRQ 91          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A438EPL5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EPL5_VITVI)

HSP 1 Score: 67.8 bits (164), Expect = 3.930e-12
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +PK ++EA  SL+   WQ A E EM+ +  N VWT VE   +   +    +YK+KI  DGKVE YK RLVA GYRQ
Sbjct:   96 DPKNYEEAMQSLDRNKWQEAMESEMESMKINKVWTLVEASNDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQ 171          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR)

HSP 1 Score: 69.3 bits (168), Expect = 4.870e-12
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +PK ++EA  SL+ + W RA E EM+ +  N VWT VE  K    +    +YK+KI  DGKVE YK RLVA GYRQ
Sbjct:   92 DPKSYEEAMQSLDHDKWIRAMESEMESMKINKVWTLVEASKGIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQ 167          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: UPI00092F2BFF (uncharacterized protein LOC109329337 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F2BFF)

HSP 1 Score: 68.2 bits (165), Expect = 1.010e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +PK ++EA  SL+ E WQ A E EM+ +  N VWT V+  K+   +    +YK+K   DGKVE YK RLVA GYRQ
Sbjct:  194 DPKCYEEAMRSLDHEKWQEAMESEMESMKINKVWTLVDASKDIKPIGCKWVYKKKNGADGKVETYKARLVANGYRQ 269          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A438K4Q3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K4Q3_VITVI)

HSP 1 Score: 68.2 bits (165), Expect = 1.250e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +PK ++EA  SL+   WQ A E EM+ +  N VWT VE  K+   +    +YK+KI  DGKVE YK RLVA GYR+
Sbjct:  367 DPKNYEEAMQSLDRNKWQEAMESEMESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRK 442          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI)

HSP 1 Score: 68.2 bits (165), Expect = 1.270e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +PK ++EA  SL+   WQ A E E++ +  N VWT VE  K+   +    +YK+KI  DGKVE YK RLVA GYRQ
Sbjct:  367 DPKNYEEAMQSLDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQ 442          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A151TN37_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TN37_CAJCA)

HSP 1 Score: 67.4 bits (163), Expect = 2.350e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +P  ++EA  SL+ E W+ A E EM+ +  N VWT VE  K+   +    +YK+KI  DGKVE YK RLVA GYRQ
Sbjct:  340 DPNSYEEAIRSLDHEKWREAMESEMESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQ 415          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A151QLI3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QLI3_CAJCA)

HSP 1 Score: 67.4 bits (163), Expect = 2.370e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            +P  ++EA  SL+ E W+ A E EM+ +  N VWT VE  K+   +    +YK+KI  DGKVE YK RLVA GYRQ
Sbjct:  608 DPNSYEEAIRSLDHEKWREAMESEMESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQ 683          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 66.6 bits (161), Expect = 4.380e-11
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            EP  +Q+A A     HW+ A ++E++ L DNG W+ V+ P N   V    +YK K++ DGKVE+YK RLVA GY Q
Sbjct:  159 EPNSYQKAVAHS---HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQ 231          
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 66.6 bits (161), Expect = 4.450e-11
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMMIYKRKIDEDGKVEKYKCRLVAYGYRQ 76
            EP+ ++EA AS E E W+RA E E   LI N  WT+ + P  +  ++  +I+K+K D DGKV +YK RLV  G+ Q
Sbjct:  564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQ 639          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62633.14024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438BR65_VITVI2.630e-1247.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A438EPL5_VITVI3.930e-1248.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3MAN7_TRIPR4.870e-1250.00Retrotransposon protein putative Ty1-copia subclas... [more]
UPI00092F2BFF1.010e-1148.68uncharacterized protein LOC109329337 n=1 Tax=Lupin... [more]
A0A438K4Q3_VITVI1.250e-1148.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A438K5H3_VITVI1.270e-1148.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A151TN37_CAJCA2.350e-1148.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QLI3_CAJCA2.370e-1148.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A061F8M9_THECC4.380e-1146.05Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A0J7K690_LASNI4.450e-1144.74Retrovirus-related pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 15..76
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 15..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62633contigH-paniculata_contig62633:100..327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62633.14024.1mRNA_H-paniculata_contig62633.14024.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62633 100..327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62633.14024.1 ID=prot_H-paniculata_contig62633.14024.1|Name=mRNA_H-paniculata_contig62633.14024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
EPKYHQEAQASLEWEHWQRAQEVEMQGLIDNGVWTQVERPKNKLVVSRMM
IYKRKIDEDGKVEKYKCRLVAYGYRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like