mRNA_H-paniculata_contig6257.14016.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: D7FW81_ECTSI (Pantothenate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW81_ECTSI) HSP 1 Score: 346 bits (888), Expect = 2.000e-113 Identity = 188/318 (59.12%), Postives = 225/318 (70.75%), Query Frame = 2
Query: 161 VWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRT--AEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMPITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGDGKASAWVLHKAVVDSWEVEGSTPERMRDRIQYVAEVIHLGIASLAFG 1108
+WL LMIGNSRLHWA+L RD V+E WD+ H+ + EGP ATS + EGIPLS +S SRV + GV T S C +P RF+VASVVP+ELE WRRRC GI PI+S D +AG ++Y TLGVDRALAVRGAAR+ GWPV+V+DCGSALTFTA D G+L GGAILPGVRLQLA LG+RTAQLPS+V LP++LP RWAM T GGIQAGVMWTIVAGI SFI+DRW+++ +ATV+FTGGDG+ VLH+AVVD WE EG R+R+R+++V EVIH GIASL G
Sbjct: 5 MWLCLMIGNSRLHWALLERDDVMEMWDTGHLRKDDGIEGPT---ATSGAVQ-------EGIPLSLMS-----------SRVGQTVDDGV------PPTGDGGNASTCYTADPRRFKVASVVPEELERWRRRCPGISPISSTDALAGVQEYPTLGVDRALAVRGAARMRGWPVLVIDCGSALTFTAADASGRLAGGAILPGVRLQLAVLGSRTAQLPSDVVLPDELPLRWAMGTSGGIQAGVMWTIVAGIHSFIKDRWKIDPDATVIFTGGDGQ----VLHRAVVDFWEAEGPDLVRVRNRLEFVREVIHWGIASLELG 291
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: UPI00145C75C2 (pantothenate kinase n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145C75C2) HSP 1 Score: 169 bits (429), Expect = 8.040e-45 Identity = 115/276 (41.67%), Postives = 153/276 (55.43%), Query Frame = 2
Query: 155 DEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPT-SGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRR---CIGIMPITSHDV-IAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
WL+LMIGNSRLHWA + + ++ TWD+ ++ T N + E+ EGI QGD+ E T G E S + D + P +ASVVP + LW+ CI IT V I G Y+TLG+DRALA+ GA +V G+PV+V+D G+ALTFT D L GGAILPG+ LQLA L RT QLP+ V P+QLP R+A++TQ +Q+GV++T+VAGI+ FIE WR + +V TGGD
Sbjct: 4 SSFWLALMIGNSRLHWAHFIGETLIRTWDTNYMPANIVQKLSQSKTLNDLPPEILPPNEGIN-----------GQGDTGDHRSEETMEGRTEGEFSLTLSLSDSLNPLSPHLPIPLLLASVVPNQTALWQTYPNVCI----ITLEQVPIKGI--YSTLGIDRALALLGAGQVWGFPVLVIDAGTALTFTGADTNHCLVGGAILPGLGLQLATLAERTGQLPT-VESPQQLPQRYALNTQQAMQSGVIYTLVAGIKDFIEAWWRDFPQGKIVMTGGD 261
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: A0A8J6WUE7_9CYAN (Type III pantothenate kinase n=2 Tax=Trichocoleus sp. FACHB-262 TaxID=2692869 RepID=A0A8J6WUE7_9CYAN) HSP 1 Score: 162 bits (409), Expect = 1.480e-42 Identity = 105/273 (38.46%), Postives = 148/273 (54.21%), Query Frame = 2
Query: 152 MDEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAE-GPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMPITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
MD+ W +LMIGNSRLHWA + D + WDS H+ + P +G T K+A ++G RE GE E S +L + +ASVVP + +W+ ++ I + + I Y TLG+DRALA+ GA V GWP +V+D G+ALTFT G+ E +L GGAILPG+ LQ+ +L +TA LP+ +TLPE LP RWA TQ I +G+++T++AG+ FI+ W+ + VV TGGD
Sbjct: 1 MDKSWFALMIGNSRLHWAWFVGDQLQSAWDSEHLVSSGPPSPSILGGTL--------------------KTASPKIEG------RE---------------GE-ERSREDNLNNSPIVLASVVPAQTTIWQD--YPLLQILTLEQILLEHSYPTLGIDRALALWGAGEVYGWPALVIDAGTALTFTGGNAERQLVGGAILPGLSLQVRSLAQKTAALPA-ITLPETLPTRWANDTQEAIASGIIYTVLAGVMDFIQAWWQEFPGSAVVMTGGD 228
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: A0A433NMY3_CHLFR (Type III pantothenate kinase n=2 Tax=Chlorogloeopsis fritschii TaxID=1124 RepID=A0A433NMY3_CHLFR) HSP 1 Score: 161 bits (408), Expect = 1.560e-42 Identity = 101/272 (37.13%), Postives = 145/272 (53.31%), Query Frame = 2
Query: 161 VWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMP---ITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
+WL+LMIGNSRLHW + + + +TWD+ H+ ++ IG + + + ++ PL S L +ASVVPK+ LW+ I P I + + + Y TLG+DRALA+ GA + G+P+++VD G+ALTFT D L GGAILPG+ LQLAAL RT QLP NV LP+QLP R+A++TQ +Q+GV++T++AGI+ F+E WR E+ + TGGD
Sbjct: 1 MWLALMIGNSRLHWGLFEGETLCQTWDTNHLPESSLQQLAIGQSLDDLLKTISPSP---PLPLPSSXXXXXL------------------------------------------LASVVPKQTALWQ-----IYPNVRIITLEQVPLQGLYPTLGIDRALALWGAGKTWGFPMLIVDAGTALTFTGADANQNLNGGAILPGLSLQLAALANRTGQLP-NVELPQQLPQRFALTTQEAMQSGVIYTLLAGIKDFVEAWWRSYPESKIAITGGD 221
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: A0A8J7BAP4_9CYAN (Type III pantothenate kinase n=2 Tax=Trichocoleus sp. FACHB-591 TaxID=2692872 RepID=A0A8J7BAP4_9CYAN) HSP 1 Score: 160 bits (406), Expect = 3.890e-42 Identity = 109/272 (40.07%), Postives = 149/272 (54.78%), Query Frame = 2
Query: 152 MDEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMPITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
MD+ WL+LMIGNSRLHWA RD + TWDS H+ + D + N EGI L S S+RE R+ + E+ +L+ +ASVVP ++ +W+ + I + + I Y TLG+DRALA+ GA V GWPV+V+D G+ALTFT G+ E +L GGAILPG+ LQ+ +L +TA LP+ + LPE LP RWA TQ I +G+ T++AG+ +FIE W + VV TGGD
Sbjct: 1 MDKSWLALMIGNSRLHWAWFDRDQLQSTWDSEHLVNS-----DPPSPPNL---------EGI-LERASLSSRE---------------------RAVRRSREE------NLDELPIVLASVVPDQIAIWQG--YPHLQILTLEQILLEHSYPTLGIDRALALWGAGEVYGWPVLVIDAGTALTFTGGNTERQLVGGAILPGLSLQVRSLAQKTAALPA-IALPETLPTRWANDTQEAIASGITHTVLAGVVNFIEAWWEEFPGSAVVITGGD 227
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: UPI0013917CE5 (Pantothenate kinase n=4 Tax=Nostocaceae TaxID=1162 RepID=UPI0013917CE5) HSP 1 Score: 159 bits (402), Expect = 2.030e-41 Identity = 102/271 (37.64%), Postives = 147/271 (54.24%), Query Frame = 2
Query: 155 DEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMPITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
+++WL+L IGNSRLHWA+ + + + WD+ H+ + T + + E+ PLS LS RE++ ETS+ L + VASVVP++ LW+ + + + D + Y TLG+DRALA+ GA + G+P++V+D G+ALTFTA D L GGAILPG+ LQ A LG +T QLP T LPPR+A++TQ IQ+GV++T++AGI+ FIE W L E + GGD
Sbjct: 11 EKLWLALEIGNSRLHWALFIGETLECVWDTDHLPESVIQQMAQCRTLDDLPIEI------FPLSLLSGKQREIIA---------------------------ETSSYLPI-----FVASVVPQQTALWQN--YPHIRVITLDQVPLKGMYPTLGIDRALALWGAGKTWGFPMLVIDAGTALTFTAADANQCLVGGAILPGIGLQFATLGQKTGQLPLVETHNFTLPPRFALNTQEAIQSGVIYTLLAGIKDFIEAWWSLFPEGKIAIKGGD 241
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: UPI00168338B6 (pantothenate kinase n=1 Tax=Microcoleus sp. FACHB-831 TaxID=2692827 RepID=UPI00168338B6) HSP 1 Score: 157 bits (397), Expect = 3.750e-41 Identity = 102/274 (37.23%), Postives = 139/274 (50.73%), Query Frame = 2
Query: 146 LDMDEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMPITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
+ +D++WL LMIGNSRLHWA + + + E WD+ + R E P + +DE S L+L ASVVP + LW+ + + + + I + Y TLG+DRALAV GA G+P +V+D G+ALTFT D+ L GGAILPG++LQL +LG RTA LP V LP QLP RWA ST I++GV++T+++G+R FIE W E+ VV TGGD
Sbjct: 1 MSIDKIWLGLMIGNSRLHWARFIGETLQEAWDTEFVERRRETP----------------------------------------------------------SLQDEQSVPLYL-------ASVVPTQTALWQD--YPDVRVITLEQIPLRKLYPTLGIDRALAVLGAGETYGYPCLVIDAGTALTFTGVDENRCLVGGAILPGLKLQLESLGKRTAALPQ-VELPSQLPTRWAKSTPEAIESGVVYTVLSGMRDFIEAWWHSFPESRVVLTGGD 206
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: A0A846FKE9_9CYAN (Type III pantothenate kinase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FKE9_9CYAN) HSP 1 Score: 158 bits (399), Expect = 4.670e-41 Identity = 95/277 (34.30%), Postives = 142/277 (51.26%), Query Frame = 2
Query: 155 DEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWR---RRCIGIMPITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLP-SNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGDGK 973
+ WL LMIGNSR HWA D + ++WD+ H+ + +T +G + L+ + L G L P +ASVVP + ELW+ + + + + I + YAT+G+DRALA+ GA GWP++V+DCG+ALT TA +++ + GGAILPG++LQ AL TA LP S+++ LP RWAM+T I++G+ +T +AGIR ++ED W ++TVV TGGD +
Sbjct: 5 NRAWLGLMIGNSRWHWAWFRGDRLYQSWDTPHLSAVL------------LEQLITSSFQGGVWTELASVDPQALPG-------------------------------LDNAPVEICLASVVPSQTELWKPYSNLALLNLVVLKLEQIPIQDLYATIGIDRALALLGAGATRGWPILVIDCGTALTLTAANQQQQFVGGAILPGIKLQFQALAQNTAALPLSHLSERHSLPQRWAMTTSAAIRSGITYTTLAGIRDYVEDWWSTYPQSTVVLTGGDSR 238
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: A0A0C2MD90_9CYAN (Type III pantothenate kinase n=3 Tax=Scytonemataceae TaxID=1182 RepID=A0A0C2MD90_9CYAN) HSP 1 Score: 157 bits (396), Expect = 1.300e-40 Identity = 111/294 (37.76%), Postives = 158/294 (53.74%), Query Frame = 2
Query: 161 VWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMP---ITSHDVIAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGDGKASAWVLHKA---VVDSWEVE 1024
+WL+LMIGNSRLHWA + ++ WD+ ++ P D+ Q++ T++ + + +++ + G+ + +S + P VASVVP + LW+ I P I S D + Y TLG+DRALA+ GA G+PV+V+D G+ALTFT D L GGAILPG+ LQLA L RT QLP+ V LP+QLP R+A++TQ +Q+GV++T+VAGI+ FIE WR + VV TGGD + L +VDS VE
Sbjct: 1 MWLALMIGNSRLHWAQFTGETLIYAWDTDYL------PADV---IQQLSQSQTLKDLLLKIFPSNEATGKARHGNMEDFLKTLSSFLPSPP---------------------VIVASVVPSQTALWQ-----IYPNVRILSLDQVPIKGMYPTLGIDRALALWGAGNNWGFPVLVIDAGTALTFTGADANQHLVGGAILPGLGLQLATLAERTGQLPT-VELPQQLPQRYALNTQEAMQSGVIYTLVAGIKDFIEAWWRDFPQGNVVVTGGDRELLVNYLQSQFPEIVDSLNVE 258
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Match: UPI001ABB7F66 (pantothenate kinase n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABB7F66) HSP 1 Score: 156 bits (395), Expect = 1.580e-40 Identity = 109/270 (40.37%), Postives = 147/270 (54.44%), Query Frame = 2
Query: 161 VWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQIADEVTVEGEGIPLSFLSKSARELLQGDSSRVTREPTSGVGEPARSTATAGEDETSACLHLEPNRFRVASVVPKELELWRRRCIGIMPITSHDV-IAGTEKYATLGVDRALAVRGAARVGGWPVMVVDCGSALTFTAGDKEGKLGGGAILPGVRLQLAALGTRTAQLPSNVTLPEQLPPRWAMSTQGGIQAGVMWTIVAGIRSFIEDRWRLESEATVVFTGGD 967
+WL LMIGNSRLHW+ + ++ WD+ ++ A Q+A T+E + + R++ G +T P E L+L ASVVP E LW+ + IT V + G Y TLG+DRALA+ GA + +PV+V+D G+ALTFT D + L GGAILPG LQ A LG RT QLP NVTLP+QLP R+A++TQ I +GV++TIVAG++ FI+ W L +E VV TGGD
Sbjct: 1 MWLGLMIGNSRLHWSWFVDKAIVCAWDTDYLPE---------AVIEQLAKSQTLEDLPPEIFLPIQRGRDI--GTEKLITTTP-----------------EFPLPLYL-------ASVVPSETRLWQTYP-NVQLITLEQVPLEGM--YPTLGIDRALALWGAGQNWSFPVLVIDAGTALTFTGADSKRCLVGGAILPGFGLQFATLGGRTGQLP-NVTLPQQLPKRYALNTQEAIHSGVIYTIVAGVKDFIQAWWELFAEGNVVVTGGD 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6257.14016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6257.14016.1 >prot_H-paniculata_contig6257.14016.1 ID=prot_H-paniculata_contig6257.14016.1|Name=mRNA_H-paniculata_contig6257.14016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp MDEVWLSLMIGNSRLHWAVLLRDHVLETWDSRHIGRTAEGPFDIGATSNQback to top mRNA from alignment at H-paniculata_contig6257:6621..11973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6257.14016.1 ID=mRNA_H-paniculata_contig6257.14016.1|Name=mRNA_H-paniculata_contig6257.14016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5353bp|location=Sequence derived from alignment at H-paniculata_contig6257:6621..11973+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6257:6621..11973+ >mRNA_H-paniculata_contig6257.14016.1 ID=mRNA_H-paniculata_contig6257.14016.1|Name=mRNA_H-paniculata_contig6257.14016.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig6257:6621..11973+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |