prot_H-paniculata_contig62117.13955.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62117.13955.1
Unique Nameprot_H-paniculata_contig62117.13955.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 7.860e-21
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGL 77
            PMP+LE   + ++ A+ + +LD+LQGYW MPL P+ QEIFTM+   G+Y+P R+PQGVLNATSY+QGTM  +L  L
Sbjct:  731 PMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL 806          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A6G0SJ18_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SJ18_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.900e-19
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLGK 80
            PMP LE +   + GA V   LD  +GYWQ+PL    QE+FT +T +G+YTPTR+P G  +A +Y QG + ++  GLLG 
Sbjct:   18 PMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLLGN 96          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 8.400e-19
Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    3 MPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGL 77
            MPN E     ++ A  + +LDLLQ YWQ PL P+ QEIFT+ T  G+YTP R+PQG+LNATSYFQ T+  +L GL
Sbjct:  830 MPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGL 904          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A6A3GVC4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3GVC4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.330e-18
Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLG 79
            PMP L+ +  G+ GA VF  LD  +GYWQ+PL P  QE+++ VT +G+YTPTR+P G  +A +Y QG + ++   L+G
Sbjct:   87 PMPVLDVVLGGLEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQGVVDEIFGDLIG 164          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM)

HSP 1 Score: 86.7 bits (213), Expect = 5.370e-18
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLG 79
            PMP LE +   + GA VF  LD  +GYWQ+PL P  QEI++ VT +G+YTPTR+P G  +A +Y QG + ++   LLG
Sbjct:   18 PMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLG 95          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: H3H656_PHYRM (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H656_PHYRM)

HSP 1 Score: 86.7 bits (213), Expect = 5.370e-18
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLG 79
            PMP LE +   + GA VF  LD  +GYWQ+PL P  QEI++ VT +G+YTPTR+P G  +A +Y QG + ++   LLG
Sbjct:  744 PMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLG 821          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM)

HSP 1 Score: 86.7 bits (213), Expect = 5.440e-18
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLG 79
            PMP LE +   + GA VF  LD  +GYWQ+PL P  QEI++ VT +G+YTPTR+P G  +A +Y QG + ++   LLG
Sbjct:  746 PMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLG 823          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A6A3FJD6_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJD6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 9.840e-18
Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLG 79
            PMP L+ +  G+ GA VF  LD L+GYWQ+PL P  QE+++ VT +G+YTPTR+P G  +A +Y  G + ++   L+G
Sbjct:  344 PMPVLDVVLGGLEGARVFFVLDWLRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCHGVVEEIFGDLVG 421          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.000e-17
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLGK 80
            PMP LE +   + GA VF  LD  +GYWQ+PL    QE+FT +T +G+YTPTR+P G  +A +Y QG + ++   LLG 
Sbjct:  528 PMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGN 606          
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Match: A0A6A3I3R6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I3R6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.000e-17
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    2 PMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVYTPTRLPQGVLNATSYFQGTMGDVLAGLLGK 80
            PMP LE +   + GA  F  LD  +GYWQ+PL P  QE+F+ VT +G+YTPTR+P G  +A +Y QG + ++   LLG+
Sbjct:  123 PMPVLEVVIGELEGAKYFFVLDWFRGYWQLPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGQ 201          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62117.13955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE7.860e-2156.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6G0SJ18_9STRA4.900e-1946.84Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K5A5_9PHAE8.400e-1956.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3GVC4_9STRA3.330e-1846.15Reverse transcriptase domain-containing protein n=... [more]
H3H555_PHYRM5.370e-1848.72Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
H3H656_PHYRM5.370e-1848.72Reverse transcriptase domain-containing protein n=... [more]
H3H4S7_PHYRM5.440e-1848.72Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3FJD6_9STRA9.840e-1846.15Reverse transcriptase domain-containing protein n=... [more]
A0A2P4WWJ1_9STRA1.000e-1746.84Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3I3R6_9STRA1.000e-1746.84Uncharacterized protein n=3 Tax=Phytophthora rubi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 32..59
e-value: 2.9E-17
score: 64.7
NoneNo IPR availableGENE3D3.30.70.270coord: 2..77
e-value: 2.9E-17
score: 64.7
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62117contigH-paniculata_contig62117:506..754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62117.13955.1mRNA_H-paniculata_contig62117.13955.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62117 362..760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62117.13955.1 ID=prot_H-paniculata_contig62117.13955.1|Name=mRNA_H-paniculata_contig62117.13955.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
MPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQGQEIFTMVTAKGVY
TPTRLPQGVLNATSYFQGTMGDVLAGLLGKIC*
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