mRNA_H-paniculata_contig6164.13882.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 8.570e-152 Identity = 289/495 (58.38%), Postives = 326/495 (65.86%), Query Frame = 1
Query: 1 MVHLTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKP------------------AAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGG---MGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVGMQPSFQSQAPTXXXXPTSAAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAEAQPEGAVDEDEDMYG 1422
MV LTVKTIKGKKFQI VE T V+EVK VIE N EFPAAQLKLIHSG+ILKD+ TL EY IKE+EF+VCMVTKP AAAAPA XXXXXXXX N DH+RQL +MGFPEDQ AALRAAMGNPD AV+ LMTGIPDNIQ +AA+P+ AAA AMETL+DFRGHPQFN+LKRLVQ DP LS++LQMIG+QSPNLLARIHENQ +FIALMNEP++E+ PPAAA A G MMGSG NNPAQ+AQ+LQ ++P QR QMAAAM +QFQQLMG +N+GG+PGAGMGG +PPGA AG NVI L+EEEGAAVARL ELGF+RTDAAQAYLACDKNEALAAN L++ MG GM P+FQ+ AP PT+A P XXXXXXXX P+G DEDEDMYG
Sbjct: 1 MVKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTAAAAPAAAPAXXXXXXXX---------------------NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQ---AAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGG---IPPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPAP-PTAATPATXXXXXXXXSDSTAPSATENPADPSPATGESSPTNPSAGGN-NPQGGGDEDEDMYG 466
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA) HSP 1 Score: 290 bits (743), Expect = 2.910e-90 Identity = 210/407 (51.60%), Postives = 260/407 (63.88%), Query Frame = 1
Query: 4 VHLTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASPNEDH----IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAA----------GAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDG 1176
+ LTVKT+KG KF ++ P+ V +VK +IEA E PAA +KLIHSGK+LKD +++ NIK +F+V M+TK K AA XXXXXXXXXXXXXXXXXXXXXXXXX A P +D I L MGFPE +ARA LRAA GNPD AV+ LM GIP +Q +AA+ +++ P L R HPQF+ L+RLVQ +P L VL IGQQ P LL I+ NQ +F+ +MNEP+ V PAAA AP G G G GM NPAQMAQMLQ+++P + +MA+ M +SP+QLT +QMI +PP+QFQ+ M G G GM GM + ++ LTE+E AAV RL E+GFDR DAAQA+LACDKNEALAANLLMDG
Sbjct: 1 MQLTVKTLKGGKFTVDAAPSSTVADVKGLIEAAKSELPAATMKLIHSGKVLKDADSIESCNIKPTDFLVVMITKAKKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEPAVAAPPADDFPAEVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIPPAVQAQQAAATTGSSSSGEP-----LAALRSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPI--AVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMGNPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYMMQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMDG 400
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO) HSP 1 Score: 290 bits (741), Expect = 5.620e-90 Identity = 216/417 (51.80%), Postives = 265/417 (63.55%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASP----------------NEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVD---ETVP-----PAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 1188
LTVKT+KG KF + VE TH V+E K IE PE A+ LKLIHSGK+LKD+ T+ IK ++F+V MVTK K AA P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++ + L MGFPE + R LRAA GNPD AV+ L GIPD + A A+ S +A P+ +A + L R HPQFN+L+RLVQ +P ML VL IGQQ P LL I+ +Q F+ +MNEPV + P P A+ A GMG M GM NPAQMAQM+Q+++P + +QMA MG+S QL +QM+G +PP+Q QQ M + GG G G G+ V+ LTEEE AAV RL E+GFDR++AAQA+LACDKNEALAANLLMD MG G
Sbjct: 3 LTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAVS-AAMNATESSSATPA-QATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVTAAPSSAPTGSRAPTASSESASGMGMPM---EGMGNPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFM--AHMGGGEGHG--------------GQQVLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 398
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA) HSP 1 Score: 277 bits (709), Expect = 8.250e-85 Identity = 218/449 (48.55%), Postives = 273/449 (60.80%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPK---PAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH---------------------------------------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSP----------AAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPV---DETVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADA-AGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 1188
LTVKT++G F ++ E T V VK IE +FP +Q KLIH+GK+LKDDSTL EYN+KE++F+V MVTKPK PAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++QL+DMGFPEDQ R+ALRAA NP+ AV+ LMTGIP+ A A+PS A A + + TL+ R HPQF+ L++LVQ +PA L VLQ IG QSP LL IH+NQ+ F+ ++NEP+ D P+ AGA +G MG G M P Q+ Q++ +LTP Q+ QMAA MG++P+QL +SQM+ +LPP +Q+M + G GG+ G+ GA A A + I L+EEE AAV RL E+GF+RTD QAYLACDKNEALAAN LMD G
Sbjct: 3 LTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQ-KFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAPKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGASAATATAVTGDEANTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFDLG--MGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGG-------GGLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDFG 441
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A8J2SQ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ80_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.410e-84 Identity = 204/399 (51.13%), Postives = 261/399 (65.41%), Query Frame = 1
Query: 16 VKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH------IRQLMDMGFP-EDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVP-GAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 1188
VKT++G+ F++ P +K VKD+IE + PE AA +KLIHSGK+LKDD TL + + E F+VCMVTKPK A XXXXXXXXXXXXXXXXXXXXXXXXXXXXA+P D + QL MGF E+Q+RAALRAAMGN D AV+ LM GIP+ +Q + + A A SP A+ R HPQF++L+R +Q +PA L VLQ +G++ P LL I +NQ EF+A+MNEPV E APA MG+G + AQ A+ +Q+++P QR Q+AA +G++P+Q Q SQ + ++P +Q +QL+G + GG+P GA PP +NV+ LT EE AV RL ELGF R DAAQAYLACDKNE+LAANLL DG G G
Sbjct: 5 VKTLEGRLFKVEAAPEASIKAVKDIIETSQPELKAAMMKLIHSGKVLKDDETLADKGVTEQSFLVCMVTKPKRARXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXATPQNDEFVSPEALAQLNAMGFGHEEQSRAALRAAMGNVDMAVEFLMNGIPE--EQPSQNVEMTEAQAASPLAV-----LRSHPQFDELRRTIQANPASLQQVLQGLGREDPQLLQTIKDNQAEFLAMMNEPVQE--------APA------MGAGGDDLDAAQFARAMQSISPQQRAQLAATIGLTPEQFEQFSQQMQNMPREQLRQLLGALGGGGMPRGAXXXXXXXXPP------QNVVRLTREEAEAVGRLCELGFSREDAAQAYLACDKNESLAANLLFDGFGGG 372
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: D0MVR9_PHYIT (UV excision repair protein RAD23 n=6 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVR9_PHYIT) HSP 1 Score: 276 bits (706), Expect = 1.740e-84 Identity = 212/429 (49.42%), Postives = 268/429 (62.47%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------SPNEDH-----------------------------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSP-AAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDE----TVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMD 1173
LTVKT++G F ++ E T V VK I+ +FP +Q KLIH+GK+LKDDSTL EYN+KE++F+V MVTKPK A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SP ++QL+DMGFPEDQ R+ALRAA NP+ AV+ LMTGIP+ A A PS A+A S + +L+ R HPQF+ L++LVQ +PA L VLQ IG QSP LL IH+NQ+ F+ ++NEP+ + P + +GA A MG M P Q+ Q++ +LTP Q+ QMAA MG+SP+QL +SQM+ +LPP +Q+M + G AG+ G+ G AG + I L+EEE AAV RL E+GF+RTD QAYLACDKNEALAAN LMD
Sbjct: 3 LTVKTLQGVAFPLDAELTDAVSAVKQKIKELQ-KFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXXXXXXXXXXSSGEGSNVVSDEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAAAPAQTAVPSSGASAGSDDVANSLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREAGSAPSSGSGAGAAPFDLGMGGNGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMASMGGG----AGLEGIGGXXX--XGAGGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMD 424
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK) HSP 1 Score: 272 bits (696), Expect = 5.520e-83 Identity = 206/426 (48.36%), Postives = 249/426 (58.45%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ASP------NEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQT-ASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGGMGSMMGSGAGMN---------NPAQMAQMLQ--ALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMR----GVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMG 1182
L VKT+ GK F I++E + EVKD I P+ PA KLIH+GKILKDD TL E NI EFIVCM KPA A+PAXXXXXX XXXXXXX XXX XXXXXX ++P N + ++QL+DMGFPEDQ +AALRAAMGN D AV+ LM GIP+ + A+A + S AA S LD R HPQ N LKRLVQ +P L VLQ IG QSP LLA IH NQ EF+ +MNEPVDE+ P A NPA MA+M+Q +L QR Q+A ++G+ QL Q ++ +PP+Q QQ+M AGMG G+PPGA I LT++E AV RL ++GF+R + QAYLACDKNEA+AANLLMDGMG
Sbjct: 3 LNVKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCMSKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMA---------AGMGXXXXXXXGLPPGA-----TTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC) HSP 1 Score: 271 bits (694), Expect = 6.940e-83 Identity = 190/417 (45.56%), Postives = 240/417 (57.55%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAA---------PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASA------ASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGGMGSM----MGSGA-----GMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 1188
L VKT+KG+KF+I+ E + V +VK +IEAT E A LKLIHSGK+LKD+ ++ IKE++F+V MVTK K AA PA XXXXXXXXXXXX + + + L MGFPE + + LRAA GNPD AV+ L GIP+ + + A+A SPS ++ S + + L R HPQFNDL+RLVQ +P ML VL IGQQ P LL I+ NQ F+ +MNEPV+ + +AA A +G + + SGA GM NPAQMAQM+Q ++P + QMAA M PP+Q Q M GG MGG + V+ LTEEE AAV RLAE+GFDR++AAQA+LACDKNEALAANLLMD MG G
Sbjct: 3 LLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTPVPAATPGPPVAAAASIEXXXXXXXXXXXXPTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGSQ------------VLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 407
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A3M6VGI6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI6_9STRA) HSP 1 Score: 272 bits (696), Expect = 7.310e-83 Identity = 202/437 (46.22%), Postives = 259/437 (59.27%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAA------------------------------AAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH-----------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQ---QTASAASPSPAAAP----SPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVD-ETVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMD 1173
LT+KT++G F ++ E T V VK IE +FP Q KLIH+GK+LKDDSTL EYN+KE++F+V MVTKPK A AA A XXXXXXXX XXXXXXXXXXX +S + ++QL+DMGFPEDQ R+ALRAA NP+ AV+ LMTGIPD + QTA+ + + A A E TL+ R HPQF+ L++LVQ +PA L VLQ IG QSP LL IH+NQ+ F+ ++NEP+ A++ A A MG GM P Q+ Q++ +LTP Q+ QMAA MG+SP+QL +SQM+ +LPP +Q+M + GG+ G+GG G ++ L+EEE AAV RL E+GF+RTD QAYLACDKNEALAAN LMD
Sbjct: 3 LTIKTLQGVAFSLDAELTDAVLAVKQKIEEMQ-QFPVTQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIAALAPNTSSAXXXXXXXXPXXXXXXXXXXXTAVNSSTGDGSNVMSAEQMGATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPDQVAAPLQTAATLAGAGAVAGIGGGGDETTNTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRETGSASSSAGAAPFDLGMGXXXGMPTPQQIQQLVDSLTPEQQTQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMTSMGGGGL--EGLGGXXXXXXXXXXXGHRIM-LSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMD 435
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA) HSP 1 Score: 271 bits (692), Expect = 1.340e-82 Identity = 212/427 (49.65%), Postives = 266/427 (62.30%), Query Frame = 1
Query: 10 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAA-----------------PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH----------------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVP----PAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGM 1179
LTVKT++G F I+ EPT V VK IE T FP AQ KLIH+GK+LKD+S L EYN+KE++F+V MVTKPK + PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++QL +MGFPEDQ R AL+AA NPD AV+ LM GIP+ + A+ A+ +P A + ++E L R HPQF+ L++L+Q +PA L VLQ IG QSP LL IH+NQ++F+A++NEP+ T P PAA GA G + G GA M P Q+ Q++ +LTP Q+ QMAA MG++P QL +SQM+ +LPP +Q+M A MGG G + I LTEEE AA+ RL ++GFDR +A QAYLACDKNEALAAN LMD M
Sbjct: 3 LTVKTLQGVAFSIDAEPTDTVASVKATIE-TQQSFPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTKPKAPKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMNATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAA-APLAGGAANSLEAL---RNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPI--TTPSSSVPAATGAAPLDFGGLGGGGA-MPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMM----------ASMGGDGAGXXXXXXXGGHRIMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSM 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6164.13882.1 >prot_H-paniculata_contig6164.13882.1 ID=prot_H-paniculata_contig6164.13882.1|Name=mRNA_H-paniculata_contig6164.13882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp MVHLTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKback to top mRNA from alignment at H-paniculata_contig6164:1334..6263- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6164.13882.1 ID=mRNA_H-paniculata_contig6164.13882.1|Name=mRNA_H-paniculata_contig6164.13882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4930bp|location=Sequence derived from alignment at H-paniculata_contig6164:1334..6263- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6164:1334..6263- >mRNA_H-paniculata_contig6164.13882.1 ID=mRNA_H-paniculata_contig6164.13882.1|Name=mRNA_H-paniculata_contig6164.13882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at H-paniculata_contig6164:1334..6263- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |