prot_H-paniculata_contig6164.13882.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6164.13882.1
Unique Nameprot_H-paniculata_contig6164.13882.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length475
Homology
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 8.570e-152
Identity = 289/495 (58.38%), Postives = 326/495 (65.86%), Query Frame = 0
Query:    1 MVHLTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKP------------------AAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGG---MGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVGMQPSFQSQAPTXXXXPTSAAPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAEAQPEGAVDEDEDMYG 474
            MV LTVKTIKGKKFQI VE T  V+EVK VIE  N EFPAAQLKLIHSG+ILKD+ TL EY IKE+EF+VCMVTKP                    AAAAPA    XXXXXXXX                     N DH+RQL +MGFPEDQ  AALRAAMGNPD AV+ LMTGIPDNIQ   +AA+P+ AAA    AMETL+DFRGHPQFN+LKRLVQ DP  LS++LQMIG+QSPNLLARIHENQ +FIALMNEP++E+ PPAAA   A      G MMGSG   NNPAQ+AQ+LQ ++P QR QMAAAM                   +QFQQLMG +N+GG+PGAGMGG   +PPGA  AG NVI L+EEEGAAVARL ELGF+RTDAAQAYLACDKNEALAAN L++ MG GM P+FQ+ AP     PT+A P  XXXXXXXX                                  P+G  DEDEDMYG
Sbjct:    1 MVKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXXTAAAAPAAAPAXXXXXXXX---------------------NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQ---AAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGG---IPPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPAP-PTAATPATXXXXXXXXSDSTAPSATENPADPSPATGESSPTNPSAGGN-NPQGGGDEDEDMYG 466          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.910e-90
Identity = 210/407 (51.60%), Postives = 260/407 (63.88%), Query Frame = 0
Query:    2 VHLTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASPNEDH----IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAA----------GAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDG 392
            + LTVKT+KG KF ++  P+  V +VK +IEA   E PAA +KLIHSGK+LKD  +++  NIK  +F+V M+TK K AA    XXXXXXXXXXXXXXXXXXXXXXXXX       A P +D     I  L  MGFPE +ARA LRAA GNPD AV+ LM GIP  +Q   +AA+   +++  P     L   R HPQF+ L+RLVQ +P  L  VL  IGQQ P LL  I+ NQ +F+ +MNEP+   V PAAA           AP G  G   G   GM NPAQMAQMLQ+++P +  +MA+ M +SP+QLT  +QMI  +PP+QFQ+ M      G  G GM GM         +   ++ LTE+E AAV RL E+GFDR DAAQA+LACDKNEALAANLLMDG
Sbjct:    1 MQLTVKTLKGGKFTVDAAPSSTVADVKGLIEAAKSELPAATMKLIHSGKVLKDADSIESCNIKPTDFLVVMITKAKKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEPAVAAPPADDFPAEVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIPPAVQAQQAAATTGSSSSGEP-----LAALRSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPI--AVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMGNPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYMMQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMDG 400          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO)

HSP 1 Score: 290 bits (741), Expect = 5.620e-90
Identity = 216/417 (51.80%), Postives = 265/417 (63.55%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASP----------------NEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVD---ETVP-----PAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 396
            LTVKT+KG KF + VE TH V+E K  IE   PE  A+ LKLIHSGK+LKD+ T+    IK ++F+V MVTK K  AA P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   +++ +  L  MGFPE + R  LRAA GNPD AV+ L  GIPD +   A  A+ S +A P+ +A + L   R HPQFN+L+RLVQ +P ML  VL  IGQQ P LL  I+ +Q  F+ +MNEPV     + P     P A+   A GMG  M    GM NPAQMAQM+Q+++P + +QMA  MG+S  QL   +QM+G +PP+Q QQ M   + GG  G G              G+ V+ LTEEE AAV RL E+GFDR++AAQA+LACDKNEALAANLLMD MG G
Sbjct:    3 LTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAVS-AAMNATESSSATPA-QATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVTAAPSSAPTGSRAPTASSESASGMGMPM---EGMGNPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFM--AHMGGGEGHG--------------GQQVLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 398          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 277 bits (709), Expect = 8.250e-85
Identity = 218/449 (48.55%), Postives = 273/449 (60.80%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPK---PAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH---------------------------------------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSP----------AAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPV---DETVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADA-AGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 396
            LTVKT++G  F ++ E T  V  VK  IE    +FP +Q KLIH+GK+LKDDSTL EYN+KE++F+V MVTKPK   PAAA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                              ++QL+DMGFPEDQ R+ALRAA  NP+ AV+ LMTGIP+     A  A+PS           A A + +   TL+  R HPQF+ L++LVQ +PA L  VLQ IG QSP LL  IH+NQ+ F+ ++NEP+   D    P+ AGA    +G  MG G  M  P Q+ Q++ +LTP Q+ QMAA MG++P+QL  +SQM+ +LPP   +Q+M  +  G       GG+ G+  GA A A  + I L+EEE AAV RL E+GF+RTD  QAYLACDKNEALAAN LMD    G
Sbjct:    3 LTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQ-KFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAPKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGASAATATAVTGDEANTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFDLG--MGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGG-------GGLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSGDFG 441          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A8J2SQ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ80_9STRA)

HSP 1 Score: 275 bits (704), Expect = 1.410e-84
Identity = 204/399 (51.13%), Postives = 261/399 (65.41%), Query Frame = 0
Query:    6 VKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH------IRQLMDMGFP-EDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVP-GAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 396
            VKT++G+ F++   P   +K VKD+IE + PE  AA +KLIHSGK+LKDD TL +  + E  F+VCMVTKPK A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXA+P  D       + QL  MGF  E+Q+RAALRAAMGN D AV+ LM GIP+  +Q +     + A A SP A+      R HPQF++L+R +Q +PA L  VLQ +G++ P LL  I +NQ EF+A+MNEPV E        APA      MG+G    + AQ A+ +Q+++P QR Q+AA +G++P+Q  Q SQ + ++P +Q +QL+G +  GG+P GA        PP      +NV+ LT EE  AV RL ELGF R DAAQAYLACDKNE+LAANLL DG G G
Sbjct:    5 VKTLEGRLFKVEAAPEASIKAVKDIIETSQPELKAAMMKLIHSGKVLKDDETLADKGVTEQSFLVCMVTKPKRARXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXATPQNDEFVSPEALAQLNAMGFGHEEQSRAALRAAMGNVDMAVEFLMNGIPE--EQPSQNVEMTEAQAASPLAV-----LRSHPQFDELRRTIQANPASLQQVLQGLGREDPQLLQTIKDNQAEFLAMMNEPVQE--------APA------MGAGGDDLDAAQFARAMQSISPQQRAQLAATIGLTPEQFEQFSQQMQNMPREQLRQLLGALGGGGMPRGAXXXXXXXXPP------QNVVRLTREEAEAVGRLCELGFSREDAAQAYLACDKNESLAANLLFDGFGGG 372          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: D0MVR9_PHYIT (UV excision repair protein RAD23 n=6 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVR9_PHYIT)

HSP 1 Score: 276 bits (706), Expect = 1.740e-84
Identity = 212/429 (49.42%), Postives = 268/429 (62.47%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------SPNEDH-----------------------------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSP-AAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDE----TVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMD 391
            LTVKT++G  F ++ E T  V  VK  I+    +FP +Q KLIH+GK+LKDDSTL EYN+KE++F+V MVTKPK A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        SP                                 ++QL+DMGFPEDQ R+ALRAA  NP+ AV+ LMTGIP+     A  A PS  A+A S +   +L+  R HPQF+ L++LVQ +PA L  VLQ IG QSP LL  IH+NQ+ F+ ++NEP+      + P + +GA A      MG    M  P Q+ Q++ +LTP Q+ QMAA MG+SP+QL  +SQM+ +LPP   +Q+M  +  G    AG+ G+ G       AG + I L+EEE AAV RL E+GF+RTD  QAYLACDKNEALAAN LMD
Sbjct:    3 LTVKTLQGVAFPLDAELTDAVSAVKQKIKELQ-KFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXXXXXXXXXXSSGEGSNVVSDEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAAAPAQTAVPSSGASAGSDDVANSLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTREAGSAPSSGSGAGAAPFDLGMGGNGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMASMGGG----AGLEGIGGXXX--XGAGGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMD 424          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 272 bits (696), Expect = 5.520e-83
Identity = 206/426 (48.36%), Postives = 249/426 (58.45%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ASP------NEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQT-ASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGGMGSMMGSGAGMN---------NPAQMAQMLQ--ALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMR----GVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMG 394
            L VKT+ GK F I++E +    EVKD I    P+ PA   KLIH+GKILKDD TL E NI   EFIVCM    KPA A+PAXXXXXX XXXXXXX      XXX XXXXXX             ++P      N + ++QL+DMGFPEDQ +AALRAAMGN D AV+ LM GIP+ +    A+A + S  AA S      LD  R HPQ N LKRLVQ +P  L  VLQ IG QSP LLA IH NQ EF+ +MNEPVDE+ P A                             NPA MA+M+Q  +L   QR Q+A ++G+   QL Q   ++  +PP+Q QQ+M          AGMG       G+PPGA       I LT++E  AV RL ++GF+R +  QAYLACDKNEA+AANLLMDGMG
Sbjct:    3 LNVKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCMSKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMA---------AGMGXXXXXXXGLPPGA-----TTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC)

HSP 1 Score: 271 bits (694), Expect = 6.940e-83
Identity = 190/417 (45.56%), Postives = 240/417 (57.55%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAA---------PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDHIRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASA------ASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAGAPAGGMGSM----MGSGA-----GMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVG 396
            L VKT+KG+KF+I+ E +  V +VK +IEAT  E  A  LKLIHSGK+LKD+ ++    IKE++F+V MVTK K   AA         PA              XXXXXXXXXXXX       + + +  L  MGFPE + +  LRAA GNPD AV+ L  GIP+ + + A+A       SPS ++  S  + + L   R HPQFNDL+RLVQ +P ML  VL  IGQQ P LL  I+ NQ  F+ +MNEPV+ +   +AA A +G   +     + SGA     GM NPAQMAQM+Q ++P +  QMAA M                 PP+Q  Q M     GG     MGG +            V+ LTEEE AAV RLAE+GFDR++AAQA+LACDKNEALAANLLMD MG G
Sbjct:    3 LLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTPVPAATPGPPVAAAASIEXXXXXXXXXXXXPTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGSQ------------VLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 407          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A3M6VGI6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI6_9STRA)

HSP 1 Score: 272 bits (696), Expect = 7.310e-83
Identity = 202/437 (46.22%), Postives = 259/437 (59.27%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAA------------------------------AAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH-----------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQ---QTASAASPSPAAAP----SPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVD-ETVPPAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMD 391
            LT+KT++G  F ++ E T  V  VK  IE    +FP  Q KLIH+GK+LKDDSTL EYN+KE++F+V MVTKPK A                               AA A      XXXXXXXX XXXXXXXXXXX    +S  +             ++QL+DMGFPEDQ R+ALRAA  NP+ AV+ LMTGIPD +    QTA+  + + A A       E   TL+  R HPQF+ L++LVQ +PA L  VLQ IG QSP LL  IH+NQ+ F+ ++NEP+       A++ A A      MG   GM  P Q+ Q++ +LTP Q+ QMAA MG+SP+QL  +SQM+ +LPP   +Q+M  +  GG+   G+GG           G  ++ L+EEE AAV RL E+GF+RTD  QAYLACDKNEALAAN LMD
Sbjct:    3 LTIKTLQGVAFSLDAELTDAVLAVKQKIEEMQ-QFPVTQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIAALAPNTSSAXXXXXXXXPXXXXXXXXXXXTAVNSSTGDGSNVMSAEQMGATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPDQVAAPLQTAATLAGAGAVAGIGGGGDETTNTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRETGSASSSAGAAPFDLGMGXXXGMPTPQQIQQLVDSLTPEQQTQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMTSMGGGGL--EGLGGXXXXXXXXXXXGHRIM-LSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMD 435          
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA)

HSP 1 Score: 271 bits (692), Expect = 1.340e-82
Identity = 212/427 (49.65%), Postives = 266/427 (62.30%), Query Frame = 0
Query:    4 LTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGKILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAA-----------------PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPNEDH----------------IRQLMDMGFPEDQARAALRAAMGNPDYAVDILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLVQGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVP----PAAAGAPAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQVSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHLTEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGM 393
            LTVKT++G  F I+ EPT  V  VK  IE T   FP AQ KLIH+GK+LKD+S L EYN+KE++F+V MVTKPK    +                 PAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       ++QL +MGFPEDQ R AL+AA  NPD AV+ LM GIP+ +   A+ A+ +P A  +  ++E L   R HPQF+ L++L+Q +PA L  VLQ IG QSP LL  IH+NQ++F+A++NEP+  T P    PAA GA     G + G GA M  P Q+ Q++ +LTP Q+ QMAA MG++P QL  +SQM+ +LPP   +Q+M          A MGG           G + I LTEEE AA+ RL ++GFDR +A QAYLACDKNEALAAN LMD M
Sbjct:    3 LTVKTLQGVAFSIDAEPTDTVASVKATIE-TQQSFPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTKPKAPKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMNATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAA-APLAGGAANSLEAL---RNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPI--TTPSSSVPAATGAAPLDFGGLGGGGA-MPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMM----------ASMGGDGAGXXXXXXXGGHRIMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSM 411          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6164.13882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK9_ECTSI8.570e-15258.38UV excision repair protein RAD23B homolog n=1 Tax=... [more]
A0A6T7K158_9STRA2.910e-9051.60Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5KBW7_FISSO5.620e-9051.80UV excision repair protein RAD23 n=2 Tax=Fistulife... [more]
A0A225X0I0_9STRA8.250e-8548.55UV excision repair protein RAD23 n=13 Tax=Phytopht... [more]
A0A8J2SQ80_9STRA1.410e-8451.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D0MVR9_PHYIT1.740e-8449.42UV excision repair protein RAD23 n=6 Tax=Phytophth... [more]
A0A7S4DGQ1_HETAK5.520e-8348.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B7FSN5_PHATC6.940e-8345.56RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850... [more]
A0A3M6VGI6_9STRA7.310e-8346.22Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A5D6YB40_9STRA1.340e-8249.65Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 2..74
e-value: 5.2E-20
score: 82.5
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 4..75
e-value: 3.2E-20
score: 71.6
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 2..78
score: 20.196
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 118..155
e-value: 2.9E-7
score: 40.1
coord: 354..391
e-value: 0.0036
score: 26.5
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 117..153
e-value: 5.6E-11
score: 42.1
coord: 356..389
e-value: 5.4E-7
score: 29.4
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 116..156
score: 14.692
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 350..392
score: 12.089
NoneNo IPR availableGENE3D3.10.20.90coord: 1..77
e-value: 2.8E-21
score: 77.1
NoneNo IPR availableGENE3D1.10.8.10coord: 78..161
e-value: 4.0E-17
score: 64.0
NoneNo IPR availableGENE3D1.10.8.10coord: 344..392
e-value: 2.4E-18
score: 67.9
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 3..390
NoneNo IPR availablePANTHERPTHR10621:SF0AT15685P-RELATEDcoord: 3..390
IPR015360XPC-binding domainPFAMPF09280XPC-bindingcoord: 184..239
e-value: 6.2E-19
score: 67.5
IPR036353XPC-binding domain superfamilyGENE3D1.10.10.540coord: 182..241
e-value: 3.2E-19
score: 70.3
IPR036353XPC-binding domain superfamilySUPERFAMILY101238XPC-binding domaincoord: 182..244
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 2..88
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 338..393
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 100..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6164contigH-paniculata_contig6164:1334..6263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6164.13882.1mRNA_H-paniculata_contig6164.13882.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6164 1334..6263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6164.13882.1 ID=prot_H-paniculata_contig6164.13882.1|Name=mRNA_H-paniculata_contig6164.13882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp
MVHLTVKTIKGKKFQINVEPTHLVKEVKDVIEATNPEFPAAQLKLIHSGK
ILKDDSTLQEYNIKEDEFIVCMVTKPKPAAAAPAPAVTPPAPTPAVTEPA
AATPAPAPAAVAAAASPNEDHIRQLMDMGFPEDQARAALRAAMGNPDYAV
DILMTGIPDNIQQTASAASPSPAAAPSPEAMETLDDFRGHPQFNDLKRLV
QGDPAMLSNVLQMIGQQSPNLLARIHENQNEFIALMNEPVDETVPPAAAG
APAGGMGSMMGSGAGMNNPAQMAQMLQALTPVQREQMAAAMGVSPQQLTQ
VSQMIGSLPPDQFQQLMGMVNSGGVPGAGMGGMRGVPPGADAAGRNVIHL
TEEEGAAVARLAELGFDRTDAAQAYLACDKNEALAANLLMDGMGVGMQPS
FQSQAPTPTPAPTSAAPEPPAATSASPRTGTATVAESASTETSSAEQNAT
ADPSAESAEAQPEGAVDEDEDMYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR015940UBA
IPR015360XPC-bd
IPR036353XPC-bd_sf
IPR029071Ubiquitin-like_domsf
IPR009060UBA-like_sf