mRNA_H-paniculata_contig6159.13875.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A6H5LM37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM37_9PHAE) HSP 1 Score: 274 bits (700), Expect = 4.470e-85 Identity = 151/235 (64.26%), Postives = 180/235 (76.60%), Query Frame = 1
Query: 595 KKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSAS---GREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSG-------LKELTLVPRTWAGRGLLGVHLVPP 1269
+KEL +LQAQRDALELEA I+SEL SPG NGEAPVGV+G+LVD GFPLAGFDLFNVREKRHR NCIQTDHKAVM+++EKSLHALH+ L RP VT AT AS G + A +D + L P+AKVN+VS GSPA++AGLAVGDLVLRFG +D+SHPKG+ GVVDVVRE EG++VPV VLR ++G+ G ++ELTLVP+TW+GRGLLGVHL+PP
Sbjct: 24 RKELVVLQAQRDALELEADAIASELKSPGANGEAPVGVKGALVDADGFPLAGFDLFNVREKRHRFNCIQTDHKAVMSRIEKSLHALHDAR-----LARPTPLPTAFSVTAATPPASSLIGMDSAAAAAD--MSLAPIAKVNQVSEGSPASAAGLAVGDLVLRFGHVDISHPKGLGGVVDVVREKEGQEVPVTVLRTTSVSGEGGSVGTGGGVRELTLVPKTWSGRGLLGVHLLPP 251
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A7S3HBQ7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBQ7_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.230e-35 Identity = 85/221 (38.46%), Postives = 126/221 (57.01%), Query Frame = 1
Query: 604 LKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRTWAGRGLLGVHLVP 1266
L L AQRDALE EA I SEL SPG NGE P G++ VD G+P D+ NV++KR RL I TD+KA+M ++E+++ LH AS + D+ T A L P+AK++E+ GSPAA+AG+ + DL+++FG++ + + +V++V +N + +P++VLR+ S EL++ P+ W GRGLLG HL P
Sbjct: 18 LNNLSAQRDALEAEADAIHSELTSPGINGEPPAGIKTPFVDAEGYPRGDIDIINVKDKRRRLAEINTDYKALMKQIEQTMLQLHNELPPVPTSVPTASENTDSNTTVAPLK------------------PMAKLDEIFPGSPAATAGIQLNDLLMQFGTVTSNTNNFLKSIVELVGKNVNQPIPMVVLRN------SECVELSITPQPWGGRGLLGCHLSP 214
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A8B7Y0R0_ACAPL (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y0R0_ACAPL) HSP 1 Score: 141 bits (355), Expect = 2.870e-35 Identity = 84/227 (37.00%), Postives = 135/227 (59.47%), Query Frame = 1
Query: 586 ADKKKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRTWAGRGLLGVHLVP 1266
A ++++++ L ++D++E E + L S G VG+ G L+DP G+P + D+++VR RHR+ C+Q DHKA+M ++E SLH LH A R ++ TN SA+ L+P A+++ V+ GSPAA+AGL VGD ++ FG ++ S+ K M V VV++NEG+ + +++LR G G+ +L+L P+TW+GRGLLG ++VP
Sbjct: 3 ASRRQKVQELMDEKDSIEKEIKELFEVLESQGN-----VGMHGPLIDPEGYPRSDIDVYSVRTARHRIICLQNDHKALMVQIESSLHDLH-------AFERQQREQGGSLPTNGAGSAAAA------------LVPFARIDLVTEGSPAANAGLLVGDEIIEFGHVNTSNFKSMQDVAAVVQQNEGKLLTIVMLREG-----QGV-QLSLKPQTWSGRGLLGCNIVP 199
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A0G4EYN7_VITBC (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EYN7_VITBC) HSP 1 Score: 137 bits (346), Expect = 5.460e-34 Identity = 88/222 (39.64%), Postives = 123/222 (55.41%), Query Frame = 1
Query: 604 LKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLP-LAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRTWAGRGLLGVHLVP 1266
L+ L RDA+E E +++ L +PG G VRG+L+D GFP A D+ +R+ RH+L C+QTDH +M K+E LH LH G + R P SSS+ + G + G+ P A V+EVS GSP+ +AGL + D ++ FG +D S P G + VV+EN GR V V+V R ++ L+L P+TW+GRGLLG HL P
Sbjct: 6 LQQLIKDRDAMESEMEALTAYLTAPGMPG-----VRGNLLDAEGFPRADLDIVPIRQARHKLACLQTDHAELMKKIEAGLHDLHA-QGAVRVPRGPGSSSSSS--------------GPSSRANGVGHRPAFAVVDEVSAGSPSEAAGLQINDRIVAFGDVDASTPDGFKSIARVVQENVGRNVNVVVRR------EAREMALSLRPQTWSGRGLLGCHLQP 201
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: UPI001455599A (26S proteasome non-ATPase regulatory subunit 9-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455599A) HSP 1 Score: 135 bits (340), Expect = 3.690e-33 Identity = 86/229 (37.55%), Postives = 129/229 (56.33%), Query Frame = 1
Query: 586 ADKKKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKE--LTLVPRTWAGRGLLGVHLVP 1266
A +++++ L A++D++E E + L S G VG+ G L+D G+P D+++ R RHR+ C+Q DHKA+M +E SLH LH Q + +++ TN +A+ I L+P A ++ VS GSPAA+AGL VGD ++ FGSI S+ K + + VVR ++GR V V+ LR G KE L+L P+TW+GRGLLG ++VP
Sbjct: 3 APTREKVQELIAEKDSIEREIKELYDVLESQGN-----VGMDGPLIDSEGYPRNDIDVYSARTARHRIICLQNDHKALMVNIENSLHDLHSYERQQR-------EQGESLPTNGASTAA------------IALIPFASIDLVSEGSPAANAGLLVGDEIIEFGSICTSNFKSLQDIATVVRHSQGRSVRVVTLREG--------KEVPLSLKPQTWSGRGLLGCNIVP 199
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: UPI0018D5F789 (26S proteasome non-ATPase regulatory subunit 9-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5F789) HSP 1 Score: 134 bits (336), Expect = 1.340e-32 Identity = 82/227 (36.12%), Postives = 130/227 (57.27%), Query Frame = 1
Query: 586 ADKKKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRTWAGRGLLGVHLVP 1266
A ++++++ L ++DA+E E L S G VG+ G L+D G+P + DL++VR RHR+ C+Q DHKA+MA +E SLH LH A R ++ TN +SA+ L+P A+++ VS GSPAA AGL GD ++ FG +D S+ + M + VV+E++G+ + ++ LR G G+ ++L P+TW+GRGLLG +++P
Sbjct: 3 APRRQKVQDLMNEKDAIEQEIKEFHEVLESQGN-----VGMHGPLIDKEGYPRSDIDLYSVRTARHRIICLQNDHKALMANIENSLHDLH-------AFERQEREHGASLPTNGAVSAAAA------------LVPFARIDLVSEGSPAAKAGLLEGDEIIEFGYVDTSNFQTMQDIAAVVQESQGKSLRILTLREG-----KGV-PVSLKPQTWSGRGLLGCNMIP 199
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: W7TDY4_9STRA (26S proteasome non-ATPase regulatory subunit 9 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDY4_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.160e-30 Identity = 94/260 (36.15%), Postives = 140/260 (53.85%), Query Frame = 1
Query: 589 DKKKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRG-SLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVN--------------------------SDGG--IQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLR----HGGMAGQSGLKE---LTLVPRTWAGRGLLGVHL 1260
D + EL+ L +RD LE EA+VI L SPGP G AP G+ G LVD GFP A D+++VR KR+RL CI TDH +M ++E+ + LH+ + + +R SN+ +T S++GR++GA++ +GG + P A +++V SPA AGL GDL++ G+++ + A +V +V+ENEGR + V V R G + KE ++L+P W+GRGLLG HL
Sbjct: 4 DARSELEELIKERDNLETEAAVIKDFLTSPGPGGAAPPGLGGVPLVDAEGFPRADIDVWDVRVKRNRLACIDTDHAELMKRIEELVQRLHQEAKTSAGVR---GMSNNW----STSSSTGRDIGALSYTRTEESQVETVPKPTACMEVENRSMEEGGGPSRQQPFAVIDQVFRASPAEEAGLKNGDLLVSLGTVNAQNHNNFAAIVALVQENEGRVLRVEVQRPQEASAGGPSSAPRKETVVMSLIPHAWSGRGLLGCHL 256
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A2J8ADI3_9CHLO (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ADI3_9CHLO) HSP 1 Score: 129 bits (324), Expect = 3.350e-30 Identity = 96/264 (36.36%), Postives = 128/264 (48.48%), Query Frame = 1
Query: 556 GLTAEACHPVADK-KKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAV---MAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGG---------IQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKG--------------MAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRTWAGRGLLGVHLVP 1266
G +AE V D +++L+ L QR E E S IS LN+PG G ++GSL+D GFP A D+ VR R+RL C+ DHKA+ +A+L +HA G +S N + + A G GAV +DG I L+P A V+EVS GSPAA+AGL VGDL+ FG + + G M V V+ EG+ V +LR Q +L P+ W+GRGLLG HL P
Sbjct: 13 GPSAEGAENVVDVLRRDLRELDRQRQGAEQEISAISERLNAPGQPG-----LKGSLLDKEGFPRADIDVHQVRRDRNRLVCLTNDHKAMTDRLARLLAEVHAASRADGSPAGAVASTTSGNASAASQTNSDADGTRPGAVAADGPAGSSGNEAFIALVPFAMVDEVSSGSPAAAAGLQVGDLLCDFGGVAVERAVGAPAAEAASGSSGPLMQRVAAVLAAREGQPVAATLLR------QXXXXXASLTPQRWSGRGLLGCHLSP 265
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A6A6P2K6_9PEZI (Uncharacterized protein n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P2K6_9PEZI) HSP 1 Score: 126 bits (317), Expect = 1.510e-29 Identity = 91/239 (38.08%), Postives = 122/239 (51.05%), Query Frame = 1
Query: 553 SGLTAEACHPVADKKKELKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISGQAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRT-WAGRGLLGVHLVP 1266
+G A A + V ++ L L A+RD ++ E + + L S G N +R SL GFP D+ +R R R+ +Q D+K +M K+E LHA H AQ+ P +S T T G G + P AKVN V GGSPA +AGL GD+VLRFG+ + + + V + V +NEGRQ+ V+V R G G S EL L PR W GRGLLG HL+P
Sbjct: 15 TGAAASAPNGVPKEELPLVELIAERDRVQSELLALGTVLESHGVN------MRTSLTTFDGFPRDDIDVAQIRTTRARMIHLQNDYKNLMGKIEIGLHA-HHAGLAAQSSPAPPASRPATQPT----------AGQATEQGPVPDTPFAKVNTVEGGSPADTAGLKPGDMVLRFGNATWLNHEKLGKVAETVSQNEGRQIRVVVERQQGSGGGSTQMELQLTPRRGWGGRGLLGCHLLP 236
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Match: A0A1S3JYQ9_LINUN (26S proteasome non-ATPase regulatory subunit 9 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JYQ9_LINUN) HSP 1 Score: 123 bits (309), Expect = 1.490e-28 Identity = 78/222 (35.14%), Postives = 121/222 (54.50%), Query Frame = 1
Query: 604 LKMLQAQRDALELEASVISSELNSPGPNGEAPVGVRGSLVDPGGFPLAGFDLFNVREKRHRLNCIQTDHKAVMAKLEKSLHALHEISG-QAQALRRPASSSNDTVVTNATLSASGREVGAVNSDGGIQLLPLAKVNEVSGGSPAASAGLAVGDLVLRFGSIDLSHPKGMAGVVDVVRENEGRQVPVIVLRHGGMAGQSGLKELTLVPRTWAGRGLLGVHLVP 1266
+K L AQ+DALE E + L S G VG+ G ++D +P + D++ VR RHR+ C+Q DHKA M ++E++L+ LHE + Q + SS+ +T V D I P AK++ V GSPA+ AGL +GD ++ FGS+++ + + + VV+ ++G + V VLR G L+L P+TW+G+GLLG ++VP
Sbjct: 31 VKELIAQKDALEAELKELMDVLESQGG-----VGMDGPILDEEQYPRSDIDVYTVRHARHRIACLQNDHKAKMKEIEENLYQLHEEARKQKEQAMEVDSSAQETKV-----------------DTAIDEKPFAKIDRVDSGSPASQAGLTLGDEIIEFGSVNVKNFTTLQNIATVVQHSQGSPLHVTVLRQGERT------HLSLTPQTWSGKGLLGCNIVP 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6159.13875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6159.13875.1 >prot_H-paniculata_contig6159.13875.1 ID=prot_H-paniculata_contig6159.13875.1|Name=mRNA_H-paniculata_contig6159.13875.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp MSGLTAEACHPVADKKKELKMLQAQRDALELEASVISSELNSPGPNGEAPback to top mRNA from alignment at H-paniculata_contig6159:1023..5712+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6159.13875.1 ID=mRNA_H-paniculata_contig6159.13875.1|Name=mRNA_H-paniculata_contig6159.13875.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4690bp|location=Sequence derived from alignment at H-paniculata_contig6159:1023..5712+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6159:1023..5712+ >mRNA_H-paniculata_contig6159.13875.1 ID=mRNA_H-paniculata_contig6159.13875.1|Name=mRNA_H-paniculata_contig6159.13875.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig6159:1023..5712+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |