mRNA_H-paniculata_contig6156.13873.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6156.13873.1
Unique NamemRNA_H-paniculata_contig6156.13873.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: D8LM91_ECTSI (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM91_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.160e-80
Identity = 133/200 (66.50%), Postives = 149/200 (74.50%), Query Frame = 2
Query:  104 GGYVDTIGSTRTKLEIARISGSIFR-SKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVD +G      +I+   G I    + F AARK  F LIHT+EGHRPDL DCP NK WRS+QIGAGIGD+GPCGR          +GEPGWEIIPELAPA GEL+IDKP + AFV TDLD++LR RGV+NLVLTGVT DV +HT MR+ANDMGYEC    DCCAATDPLNH A ISMIKKQG VF  VSTSAAL+ AM
Sbjct:   47 GGYVDKMG-----YDISLTRGPIEPLQRVFEAARKEGFPLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGR-------ILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVATDLDMVLRTRGVRNLVLTGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFG-VSTSAALVAAM 233          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A4R7MJT8_9ACTN (Nicotinamidase-related amidase n=2 Tax=Streptomycetaceae TaxID=2062 RepID=A0A4R7MJT8_9ACTN)

HSP 1 Score: 219 bits (559), Expect = 1.450e-68
Identity = 108/200 (54.00%), Postives = 138/200 (69.00%), Query Frame = 2
Query:  104 GGYVDTIGSTRTKLEIARISGSIF-RSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVDT+G      ++A     +   +K  AAAR   FT++HT+EGHRPDL DCP NK WRS++IGAGIGD+GPCGR          +GEPGWEI+PE AP  GEL++DKP + +F  TDLDL+LR RG+ +L+LTG+T DV +HT MR AND GYEC    DC  ATDP NH A + M+  QG VF A+++SAAL+  +
Sbjct:   52 GGYVDTMG-----YDLALTRAPLAPTAKVLAAARAEGFTVVHTREGHRPDLADCPPNKLWRSRRIGAGIGDSGPCGR-------ILVRGEPGWEIVPEAAPLPGELIVDKPGKGSFYATDLDLLLRTRGITHLILTGITTDVCVHTTMRDANDRGYECLLLTDCTGATDPANHEAALRMVTMQGGVFGAIASSAALLETL 239          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: UPI0011BE79E5 (cysteine hydrolase n=1 Tax=Nesterenkonia populi TaxID=1591087 RepID=UPI0011BE79E5)

HSP 1 Score: 218 bits (556), Expect = 3.520e-68
Identity = 111/199 (55.78%), Postives = 138/199 (69.35%), Query Frame = 2
Query:  104 GGYVDTIGSTRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVD++G     L + R +G    S+  AAAR+    +IHT+EGHRPDL+DCP NK WRS+QIGAGIG  GPCGR          +GEPGWEI+PE+APA GEL+IDKP + AF  TDLDL+LR RG+ +L+LTG+T DV +HT MR AND GYEC    DC  ATDP NH A + M+  QG VF AVS S A++ ++
Sbjct:   46 GGYVDSMGY---DLSLTR-NGLEPTSRVLAAAREAGIMVIHTREGHRPDLSDCPPNKLWRSEQIGAGIGTTGPCGR-------ILVRGEPGWEIVPEVAPADGELVIDKPGKGAFYATDLDLLLRSRGITHLILTGITTDVCVHTTMREANDRGYECLILSDCTGATDPGNHEAALKMVTMQGGVFGAVSDSEAVLRSL 233          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A4Q5VEE0_9GAMM (Cysteine hydrolase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A4Q5VEE0_9GAMM)

HSP 1 Score: 217 bits (553), Expect = 7.760e-68
Identity = 111/205 (54.15%), Postives = 138/205 (67.32%), Query Frame = 2
Query:  104 GGYVDTIGS----TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAMKN 694
            GGYVDT+G     TR  +E  +        K  AA RK  F +IHT+EGHRPDL D P NK WRS+QIGAGIGD GPCG+          +GEPGWEIIPELAP  GE++IDKP + +F  TDL+L+L  + ++NL+LTG+T DV +HT MR AND G+EC    DCCAATDP NH A ++MI  QG VF AV+ SA L+ A+ +
Sbjct:   39 GGYVDTMGYDISLTRAPIEPIK--------KLLAAMRKKGFHIIHTREGHRPDLADLPANKRWRSRQIGAGIGDEGPCGK-------ILIRGEPGWEIIPELAPIDGEIIIDKPGKGSFYATDLELVLHTKNIRNLILTGITTDVCVHTTMREANDRGFECVLVADCCAATDPANHKAALAMIHMQGGVFGAVTNSADLLTALND 228          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: W9GY56_9PROT (Cysteine hydrolase n=5 Tax=Skermanella TaxID=204447 RepID=W9GY56_9PROT)

HSP 1 Score: 217 bits (552), Expect = 9.370e-68
Identity = 116/204 (56.86%), Postives = 139/204 (68.14%), Query Frame = 2
Query:  104 GGYVDTIGS----TRTKLE-IARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVD +G     TR  +E IAR+          AA R+  FT++HT+EGHRPDL D P NK WRS++IGAGIGD GPCGR          +GEPGWEIIPEL+P  GE +IDKP + +F  TDLDLMLR+RG++NLVLTG+T DV +HT MR AND GYEC    DCCAATD  NH A I M+K QG VF AV+ S AL+  +
Sbjct:   37 GGYVDAMGYDLALTRAPIEPIARL---------MAAMRQGGFTILHTREGHRPDLADLPDNKRWRSRRIGAGIGDPGPCGR-------VLVRGEPGWEIIPELSPLPGEPIIDKPGKGSFCATDLDLMLRQRGIRNLVLTGITTDVCVHTTMREANDRGYECVLVEDCCAATDRSNHDAAIRMVKMQGGVFGAVARSDALLTVL 224          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: C7PWM2_CATAD (Isochorismatase hydrolase n=3 Tax=Catenulispora TaxID=414878 RepID=C7PWM2_CATAD)

HSP 1 Score: 217 bits (553), Expect = 1.140e-67
Identity = 110/199 (55.28%), Postives = 137/199 (68.84%), Query Frame = 2
Query:  104 GGYVDTIGSTRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVDT+G     L + R +  I  ++  AAAR   FT+IHT+EGHR DL DCP NK WRS+QIGAGIGD+GPCGR          +GEPGW+I+PE AP  GEL++DKP + AF  TDLDL+LR RG+ ++VLTG+T DV +HT MR AND GYEC    DC  ATDP NH A + M+  QG VF AV++S AL+  +
Sbjct:   51 GGYVDTMGY---DLALTR-APLIPTARVLAAARALGFTVIHTREGHRADLADCPPNKLWRSRQIGAGIGDSGPCGR-------ILVRGEPGWQIVPEAAPLEGELIVDKPGKGAFYATDLDLLLRTRGITHIVLTGITTDVCVHTTMREANDRGYECLLLTDCTGATDPANHEAAVRMVTMQGGVFGAVASSEALLKTL 238          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A5J6PG97_9GAMM (Cysteine hydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=2303332 RepID=A0A5J6PG97_9GAMM)

HSP 1 Score: 217 bits (552), Expect = 1.290e-67
Identity = 112/203 (55.17%), Postives = 136/203 (67.00%), Query Frame = 2
Query:  104 GGYVDTIGS----TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVDT+G     TR  +E  R        K   A R   F +IHT+EGHRPDL D P NK WRS+QIGAGIGD GPCG+          +GEPGWEIIPELAP  GE++IDKP + +F  TDL+++L  RG+KN++LTG+T DV +HT MR AND G+EC    DCCAATDP NH A I+MI  QG VF AV+TS  L+ A+
Sbjct:   45 GGYVDTMGYDINLTRAPIEPLR--------KLLPAMRAAGFHIIHTREGHRPDLADLPANKRWRSRQIGAGIGDAGPCGK-------ILIRGEPGWEIIPELAPIEGEIIIDKPGKGSFYATDLEMVLHLRGIKNIILTGITTDVCVHTTMREANDRGFECVLLADCCAATDPANHNAAIAMIHMQGGVFGAVATSTELLAAL 232          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A0F3IX77_9PROT (Cysteine hydrolase n=3 Tax=Elstera TaxID=1091044 RepID=A0A0F3IX77_9PROT)

HSP 1 Score: 216 bits (550), Expect = 2.070e-67
Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 2
Query:  101 SGGYVDTIGS----TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            +GGYVDT+G     TR  +E  +        +  AA R   + +IHT+EGHRPDL+D P NK WRSQQIGAGIGD GPCGR          +GEPGWEIIP+LAP  GE++IDKP + +F  TDLDL+LR++G+ N++LTG+T DV +HT MR AND GYEC    DCC ATD  NH A +SM+K QG VF AV++S AL+ A+
Sbjct:   38 TGGYVDTMGYDLSLTRAPIEPIK--------RLLAAMRAKGYFIIHTREGHRPDLSDLPPNKRWRSQQIGAGIGDAGPCGR-------ILVRGEPGWEIIPDLAPLPGEVIIDKPGKGSFCATDLDLILRQQGIANIILTGITTDVCVHTTMREANDRGYECLLLEDCCGATDHSNHLAALSMVKMQGGVFGAVASSEALLAAL 226          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A1J4P1N0_9ACTN (Cysteine hydrolase n=2 Tax=Streptomyces mangrovisoli TaxID=1428628 RepID=A0A1J4P1N0_9ACTN)

HSP 1 Score: 215 bits (548), Expect = 2.490e-67
Identity = 107/200 (53.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query:  104 GGYVDTIGSTRTKLEIARISGSIF-RSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
            GGYVD +G      ++A     +   +K  AAAR    T++HT+EGHRPDL+DCP NK WRS++IGAGIGD GPCGR          +GEPGWEI+PE AP  GEL+IDKP + +F  TDLDL+LR RG+ +L+LTG+T DV +HT MR AND GYEC    DC  ATDP NH A + M+  QG VF A++ SAA++ A+
Sbjct:   21 GGYVDAMG-----YDLALTRAPLGPTAKVLAAARSVGLTVVHTREGHRPDLSDCPPNKLWRSRRIGAGIGDAGPCGR-------ILVRGEPGWEIVPEAAPLPGELIIDKPGKGSFYATDLDLLLRTRGITHLILTGITTDVCVHTTMRDANDRGYECLLLTDCTGATDPANHAAALHMVTMQGGVFGAIAPSAAVLEAL 208          
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A4R1NE77_9GAMM (Nicotinamidase-related amidase n=1 Tax=Sodalis sp. 159R TaxID=2529856 RepID=A0A4R1NE77_9GAMM)

HSP 1 Score: 215 bits (548), Expect = 4.440e-67
Identity = 109/202 (53.96%), Postives = 141/202 (69.80%), Query Frame = 2
Query:  104 GGYVDTIGS--TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAMK 691
            GGYVD++G   + T+  I  I+  +      AA R   FT+IHT+EGHRPDL+D P+NK WRSQ+IGAGIGD+GPCGR          +GEPGW+IIPEL+P  GE++IDKP + +F  TDL+L+LR RG+ NL+LTG+T DV +HT MR AND G+EC    DCC ATD  NH A +SM+K QG VF AV  +A LI+ ++
Sbjct:   39 GGYVDSMGYDLSLTRAPIEPIASVL------AAMRPLGFTIIHTREGHRPDLSDLPVNKRWRSQRIGAGIGDDGPCGR-------ILVRGEPGWDIIPELSPLAGEIIIDKPGKGSFYATDLELILRTRGIVNLILTGITTDVCVHTTMREANDRGFECLLLEDCCGATDYSNHLAAVSMVKMQGGVFGAVGDAAMLIDVLE 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM91_ECTSI1.160e-8066.50Isochorismatase domain-containing protein n=2 Tax=... [more]
A0A4R7MJT8_9ACTN1.450e-6854.00Nicotinamidase-related amidase n=2 Tax=Streptomyce... [more]
UPI0011BE79E53.520e-6855.78cysteine hydrolase n=1 Tax=Nesterenkonia populi Ta... [more]
A0A4Q5VEE0_9GAMM7.760e-6854.15Cysteine hydrolase n=2 Tax=Gammaproteobacteria bac... [more]
W9GY56_9PROT9.370e-6856.86Cysteine hydrolase n=5 Tax=Skermanella TaxID=20444... [more]
C7PWM2_CATAD1.140e-6755.28Isochorismatase hydrolase n=3 Tax=Catenulispora Ta... [more]
A0A5J6PG97_9GAMM1.290e-6755.17Cysteine hydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 ... [more]
A0A0F3IX77_9PROT2.070e-6754.41Cysteine hydrolase n=3 Tax=Elstera TaxID=1091044 R... [more]
A0A1J4P1N0_9ACTN2.490e-6753.50Cysteine hydrolase n=2 Tax=Streptomyces mangroviso... [more]
A0A4R1NE77_9GAMM4.440e-6753.96Nicotinamidase-related amidase n=1 Tax=Sodalis sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6156contigH-paniculata_contig6156:6634..8899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.1
Seed ortholog evalue1.3e-28
Seed eggNOG ortholog2880.D8LM91
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Isochorismatase family
EggNOG OGs28KWI@1,2QTD4@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size700
Cds size282
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6156.13873.1prot_H-paniculata_contig6156.13873.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6156 6634..7641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930694.5493646-CDS-H-paniculata_contig6156:6633..67591622930694.5493646-CDS-H-paniculata_contig6156:6633..6759Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6156 6634..6759 -
1691481409.6902637-CDS-H-paniculata_contig6156:6633..67591691481409.6902637-CDS-H-paniculata_contig6156:6633..6759Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6156 6634..6759 -
1622930694.5630066-CDS-H-paniculata_contig6156:6935..70401622930694.5630066-CDS-H-paniculata_contig6156:6935..7040Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6156 6936..7040 -
1691481409.702368-CDS-H-paniculata_contig6156:6935..70401691481409.702368-CDS-H-paniculata_contig6156:6935..7040Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6156 6936..7040 -
1622930694.5757847-CDS-H-paniculata_contig6156:7590..76411622930694.5757847-CDS-H-paniculata_contig6156:7590..7641Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6156 7591..7641 -
1691481409.7164476-CDS-H-paniculata_contig6156:7590..76411691481409.7164476-CDS-H-paniculata_contig6156:7590..7641Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6156 7591..7641 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930694.5906725-UTR-H-paniculata_contig6156:7641..76941622930694.5906725-UTR-H-paniculata_contig6156:7641..7694Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6156 7642..7694 -
1691481409.7294714-UTR-H-paniculata_contig6156:7641..76941691481409.7294714-UTR-H-paniculata_contig6156:7641..7694Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6156 7642..7694 -
1622930694.605565-UTR-H-paniculata_contig6156:8024..82151622930694.605565-UTR-H-paniculata_contig6156:8024..8215Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6156 8025..8215 -
1691481409.7393823-UTR-H-paniculata_contig6156:8024..82151691481409.7393823-UTR-H-paniculata_contig6156:8024..8215Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6156 8025..8215 -
1622930694.6218-UTR-H-paniculata_contig6156:8725..88991622930694.6218-UTR-H-paniculata_contig6156:8725..8899Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6156 8726..8899 -
1691481409.7511055-UTR-H-paniculata_contig6156:8725..88991691481409.7511055-UTR-H-paniculata_contig6156:8725..8899Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6156 8726..8899 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6156.13873.1

>prot_H-paniculata_contig6156.13873.1 ID=prot_H-paniculata_contig6156.13873.1|Name=mRNA_H-paniculata_contig6156.13873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp
MIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGY
ECDCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAMKNN*
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mRNA from alignment at H-paniculata_contig6156:6634..8899-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6156.13873.1 ID=mRNA_H-paniculata_contig6156.13873.1|Name=mRNA_H-paniculata_contig6156.13873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2266bp|location=Sequence derived from alignment at H-paniculata_contig6156:6634..8899- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCCTGGAGAGCGAGCCGTATGCCTGGCCCTTCGACGGCAGCTTGAATTC TGCCAACACGGCAATGTTGATGATCGACATGCAGGTTGACTTCTGTTCCA TCGGGTGGCTACGTCGACACGATAGGGTCAACGCGAACGAAACTTGAAAT AGCGCGGATTTCAGGTTCCATTTTGTACTATTTCAACGGTTACTTCTATT GTAGCTCTTTGATCGTGCTACTGAACGGGTTGTTTTGCACAAGAACACGC TAAGCTGGTCAGCTCTGGTCTTCTAAGGAAACCGAAAATCAGACTTGGGA CTACGCTTCTTGTTTCGGCAAAGTACCAATACAATTGTTATCATACATGT AGTATACAAGTATGGGGCTATATTTTGAGCTCAATTGAAGGTGCAAATTC ACATGAAATTCAAAATCTTAGGCCCTTTATGGACTTTCTCATAATTGGAT CAGAGCCGCAGGCAATAGGCATACACTTTCTTCCTCATTGGTTGGCAGCT GCATATGGTTATTATATTCTGGATCTCGAAAACGCAGAGGTTATTGAAGT TATTGTTGGTGGATGCAACCCATTCTGCAACCCATCATCGTTCCACTTCG TAGCCGCACGATAATGACTATTTGTCCATCATGTGATCGCAATTTTCCGG GTATGACATCTCGCTCACGCGAAGGTCCATCGAGCCGTTCAAAAACATTT GCAGCAGCACGCAAAACATGTTTTACTCTGATTCACACACAAGAGGGACA TCGACCCGATCTGACCGACTGCCCCTTAAATAAGTGGTGGAGGAGTCAGC AAATCGGCGCCGGCATTGGGGACAATGGGCCTTGCGGCAGACGAGAGAGA CAAACTTTCTCTTCTACTGCCAAGGGTAACCTCCTCTGGCAACTCGCGGT TTTATTCAGCTCAAATATCTAGTGCTATGAATCATTATGCGTATCAAATA CGGTTTTTTAGAGTTCTTTCGGTGTGCCGTCGCCACTGTTCGCTTTTTTC AGTGGACATTCGATTCGGTATGTTGCGGGCTGCTTTTGTGAGGTTGTGCT ATCCTCGAAGTTCACCCTCATAGCCCTGCATAGCCCTGCATAGCCTAACA GGTGTTGTGTTACTACAGCCGGGATGTGGCACCGCCACCGCTTCGGCACT TTGGCTTGCTAAACTAGTTAGTGCATCCTTTTTTTTATCAGGATTCTGGT GAGAGGAGAACCTGGCTGGGAGATTATTCCGGAGCTTGCCCCCGCCGGTG GAGAGTTGATGATTGATAAACCGAGCCAAAGGGCGTTCGTTGGCACCGAC CTCGACTTGGTAGGTCTTCAGTCGACTTGAGGGGTGGGTGGTATCGTCGA GAAATAGCGTCGTCTCACAGCCGAGTTGTAATCGACTGGTATCGTTTGTC TCTGCTTCAATCTTCCCTGCATACCAACTGCAATGCACTCGACCCCGTGC GTCGTATTTATTGTGTCGCTTATTAATAATTCTTGGCAGCGGTAGCCGGG GGGGGGGTCGACAAGCGGTCTCTCGACCCGACGATAGAGGTGAATCGAAT GTGATTAGGATGCCTCCTCGTGACGGTTCAGAAAAAATGTGAATGAAATT ATGGGAAGTGCCCGCCAACGTACTCATTGAGACGGAGATATAGTACTGTC GCGGCTTGCTTTTTCTACTAAGGCTGCCGTGTCCGCCTGGTGTTCGCTGT GTTGGTTGAATTGTGTTTTTTTGCATTTGGACGGGGGGCTCAATGAGGCG CTGGTTCCGATGGCCGGCCATCTCTGTTGATGTTCATGAGGCTACAGTCA ACTTTCCAATCCGATATGTCCGCACGATCCTTTGTATGCCTTGTGCAGTG CTGTCCAAGATGCTAAGAAGACGAGGTGTCAAGAATTTGGTGCTCACAGG TGTAACTGCCGATGTGCGTTTGCACACGATTATGCGGAGCGCTAATGATA TGGGGTACGAGTGCGTCCTGCTAGAGATGGGGGCATGATTTCTGAAAGTA GTGGTGGTCGGAACTAGGTGGACTGCCGACTGGAATTTCGAAGGGAACTC CGGAAGATGGCCCCTCACCTACGCCACGTCGTCGCTCTTTGTATTACAAC AAACGATCGGCTTATCTCACCTACTTTGTACGGTTCATAGGACTGCTGCG CGGCTACGGACCCACTGAATCACACGGCAGTCATATCGATGATCAAGAAG CAAGGAGATGTATTCAGTGCGGTTTCGACGTCAGCGGCGCTCATAAATGC CATGAAAAACAACTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig6156:6634..8899-

>mRNA_H-paniculata_contig6156.13873.1 ID=mRNA_H-paniculata_contig6156.13873.1|Name=mRNA_H-paniculata_contig6156.13873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at H-paniculata_contig6156:6634..8899- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTGATAAACCGAGCCAAAGGGCGTTCGTTGGCACCGACCTCGACTT
GATGATTGATAAACCGAGCCAAAGGGCGTTCGTTGGCACCGACCTCGACT
TGATGCTAAGAAGACGAGGTGTCAAGAATTTGGTGCTCACAGGTGTAACT
GCCGATGTGCGTTTGCACACGATTATGCGGAGCGCTAATGATATGGGGTA
CGAGTGCATGCTAAGAAGACGAGGTGTCAAGAATTTGGTGCTCACAGGTG
TAACTGCCGATGTGCGTTTGCACACGATTATGCGGAGCGCTAATGATATG
GGGTACGAGTGCGACTGCTGCGCGGCTACGGACCCACTGAATCACACGGC
AGTCATATCGATGATCAAGAAGCAAGGAGATGTATTCAGTGCGGTTTCGA
CGTCAGCGGCGCTCATAAATGCCATGAAAAACAACTAAGACTGCTGCGCG
GCTACGGACCCACTGAATCACACGGCAGTCATATCGATGATCAAGAAGCA
AGGAGATGTATTCAGTGCGGTTTCGACGTCAGCGGCGCTCATAAATGCCA
TGAAAAACAACTAA
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