mRNA_H-paniculata_contig6156.13873.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: D8LM91_ECTSI (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM91_ECTSI) HSP 1 Score: 250 bits (639), Expect = 1.160e-80 Identity = 133/200 (66.50%), Postives = 149/200 (74.50%), Query Frame = 2
Query: 104 GGYVDTIGSTRTKLEIARISGSIFR-SKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVD +G +I+ G I + F AARK F LIHT+EGHRPDL DCP NK WRS+QIGAGIGD+GPCGR +GEPGWEIIPELAPA GEL+IDKP + AFV TDLD++LR RGV+NLVLTGVT DV +HT MR+ANDMGYEC DCCAATDPLNH A ISMIKKQG VF VSTSAAL+ AM
Sbjct: 47 GGYVDKMG-----YDISLTRGPIEPLQRVFEAARKEGFPLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGR-------ILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVATDLDMVLRTRGVRNLVLTGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFG-VSTSAALVAAM 233
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A4R7MJT8_9ACTN (Nicotinamidase-related amidase n=2 Tax=Streptomycetaceae TaxID=2062 RepID=A0A4R7MJT8_9ACTN) HSP 1 Score: 219 bits (559), Expect = 1.450e-68 Identity = 108/200 (54.00%), Postives = 138/200 (69.00%), Query Frame = 2
Query: 104 GGYVDTIGSTRTKLEIARISGSIF-RSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVDT+G ++A + +K AAAR FT++HT+EGHRPDL DCP NK WRS++IGAGIGD+GPCGR +GEPGWEI+PE AP GEL++DKP + +F TDLDL+LR RG+ +L+LTG+T DV +HT MR AND GYEC DC ATDP NH A + M+ QG VF A+++SAAL+ +
Sbjct: 52 GGYVDTMG-----YDLALTRAPLAPTAKVLAAARAEGFTVVHTREGHRPDLADCPPNKLWRSRRIGAGIGDSGPCGR-------ILVRGEPGWEIVPEAAPLPGELIVDKPGKGSFYATDLDLLLRTRGITHLILTGITTDVCVHTTMRDANDRGYECLLLTDCTGATDPANHEAALRMVTMQGGVFGAIASSAALLETL 239
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: UPI0011BE79E5 (cysteine hydrolase n=1 Tax=Nesterenkonia populi TaxID=1591087 RepID=UPI0011BE79E5) HSP 1 Score: 218 bits (556), Expect = 3.520e-68 Identity = 111/199 (55.78%), Postives = 138/199 (69.35%), Query Frame = 2
Query: 104 GGYVDTIGSTRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVD++G L + R +G S+ AAAR+ +IHT+EGHRPDL+DCP NK WRS+QIGAGIG GPCGR +GEPGWEI+PE+APA GEL+IDKP + AF TDLDL+LR RG+ +L+LTG+T DV +HT MR AND GYEC DC ATDP NH A + M+ QG VF AVS S A++ ++
Sbjct: 46 GGYVDSMGY---DLSLTR-NGLEPTSRVLAAAREAGIMVIHTREGHRPDLSDCPPNKLWRSEQIGAGIGTTGPCGR-------ILVRGEPGWEIVPEVAPADGELVIDKPGKGAFYATDLDLLLRSRGITHLILTGITTDVCVHTTMREANDRGYECLILSDCTGATDPGNHEAALKMVTMQGGVFGAVSDSEAVLRSL 233
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A4Q5VEE0_9GAMM (Cysteine hydrolase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A4Q5VEE0_9GAMM) HSP 1 Score: 217 bits (553), Expect = 7.760e-68 Identity = 111/205 (54.15%), Postives = 138/205 (67.32%), Query Frame = 2
Query: 104 GGYVDTIGS----TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAMKN 694
GGYVDT+G TR +E + K AA RK F +IHT+EGHRPDL D P NK WRS+QIGAGIGD GPCG+ +GEPGWEIIPELAP GE++IDKP + +F TDL+L+L + ++NL+LTG+T DV +HT MR AND G+EC DCCAATDP NH A ++MI QG VF AV+ SA L+ A+ +
Sbjct: 39 GGYVDTMGYDISLTRAPIEPIK--------KLLAAMRKKGFHIIHTREGHRPDLADLPANKRWRSRQIGAGIGDEGPCGK-------ILIRGEPGWEIIPELAPIDGEIIIDKPGKGSFYATDLELVLHTKNIRNLILTGITTDVCVHTTMREANDRGFECVLVADCCAATDPANHKAALAMIHMQGGVFGAVTNSADLLTALND 228
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: W9GY56_9PROT (Cysteine hydrolase n=5 Tax=Skermanella TaxID=204447 RepID=W9GY56_9PROT) HSP 1 Score: 217 bits (552), Expect = 9.370e-68 Identity = 116/204 (56.86%), Postives = 139/204 (68.14%), Query Frame = 2
Query: 104 GGYVDTIGS----TRTKLE-IARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVD +G TR +E IAR+ AA R+ FT++HT+EGHRPDL D P NK WRS++IGAGIGD GPCGR +GEPGWEIIPEL+P GE +IDKP + +F TDLDLMLR+RG++NLVLTG+T DV +HT MR AND GYEC DCCAATD NH A I M+K QG VF AV+ S AL+ +
Sbjct: 37 GGYVDAMGYDLALTRAPIEPIARL---------MAAMRQGGFTILHTREGHRPDLADLPDNKRWRSRRIGAGIGDPGPCGR-------VLVRGEPGWEIIPELSPLPGEPIIDKPGKGSFCATDLDLMLRQRGIRNLVLTGITTDVCVHTTMREANDRGYECVLVEDCCAATDRSNHDAAIRMVKMQGGVFGAVARSDALLTVL 224
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: C7PWM2_CATAD (Isochorismatase hydrolase n=3 Tax=Catenulispora TaxID=414878 RepID=C7PWM2_CATAD) HSP 1 Score: 217 bits (553), Expect = 1.140e-67 Identity = 110/199 (55.28%), Postives = 137/199 (68.84%), Query Frame = 2
Query: 104 GGYVDTIGSTRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVDT+G L + R + I ++ AAAR FT+IHT+EGHR DL DCP NK WRS+QIGAGIGD+GPCGR +GEPGW+I+PE AP GEL++DKP + AF TDLDL+LR RG+ ++VLTG+T DV +HT MR AND GYEC DC ATDP NH A + M+ QG VF AV++S AL+ +
Sbjct: 51 GGYVDTMGY---DLALTR-APLIPTARVLAAARALGFTVIHTREGHRADLADCPPNKLWRSRQIGAGIGDSGPCGR-------ILVRGEPGWQIVPEAAPLEGELIVDKPGKGAFYATDLDLLLRTRGITHIVLTGITTDVCVHTTMREANDRGYECLLLTDCTGATDPANHEAAVRMVTMQGGVFGAVASSEALLKTL 238
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A5J6PG97_9GAMM (Cysteine hydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=2303332 RepID=A0A5J6PG97_9GAMM) HSP 1 Score: 217 bits (552), Expect = 1.290e-67 Identity = 112/203 (55.17%), Postives = 136/203 (67.00%), Query Frame = 2
Query: 104 GGYVDTIGS----TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVDT+G TR +E R K A R F +IHT+EGHRPDL D P NK WRS+QIGAGIGD GPCG+ +GEPGWEIIPELAP GE++IDKP + +F TDL+++L RG+KN++LTG+T DV +HT MR AND G+EC DCCAATDP NH A I+MI QG VF AV+TS L+ A+
Sbjct: 45 GGYVDTMGYDINLTRAPIEPLR--------KLLPAMRAAGFHIIHTREGHRPDLADLPANKRWRSRQIGAGIGDAGPCGK-------ILIRGEPGWEIIPELAPIEGEIIIDKPGKGSFYATDLEMVLHLRGIKNIILTGITTDVCVHTTMREANDRGFECVLLADCCAATDPANHNAAIAMIHMQGGVFGAVATSTELLAAL 232
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A0F3IX77_9PROT (Cysteine hydrolase n=3 Tax=Elstera TaxID=1091044 RepID=A0A0F3IX77_9PROT) HSP 1 Score: 216 bits (550), Expect = 2.070e-67 Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 2
Query: 101 SGGYVDTIGS----TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
+GGYVDT+G TR +E + + AA R + +IHT+EGHRPDL+D P NK WRSQQIGAGIGD GPCGR +GEPGWEIIP+LAP GE++IDKP + +F TDLDL+LR++G+ N++LTG+T DV +HT MR AND GYEC DCC ATD NH A +SM+K QG VF AV++S AL+ A+
Sbjct: 38 TGGYVDTMGYDLSLTRAPIEPIK--------RLLAAMRAKGYFIIHTREGHRPDLSDLPPNKRWRSQQIGAGIGDAGPCGR-------ILVRGEPGWEIIPDLAPLPGEVIIDKPGKGSFCATDLDLILRQQGIANIILTGITTDVCVHTTMREANDRGYECLLLEDCCGATDHSNHLAALSMVKMQGGVFGAVASSEALLAAL 226
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A1J4P1N0_9ACTN (Cysteine hydrolase n=2 Tax=Streptomyces mangrovisoli TaxID=1428628 RepID=A0A1J4P1N0_9ACTN) HSP 1 Score: 215 bits (548), Expect = 2.490e-67 Identity = 107/200 (53.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query: 104 GGYVDTIGSTRTKLEIARISGSIF-RSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAM 688
GGYVD +G ++A + +K AAAR T++HT+EGHRPDL+DCP NK WRS++IGAGIGD GPCGR +GEPGWEI+PE AP GEL+IDKP + +F TDLDL+LR RG+ +L+LTG+T DV +HT MR AND GYEC DC ATDP NH A + M+ QG VF A++ SAA++ A+
Sbjct: 21 GGYVDAMG-----YDLALTRAPLGPTAKVLAAARSVGLTVVHTREGHRPDLSDCPPNKLWRSRRIGAGIGDAGPCGR-------ILVRGEPGWEIVPEAAPLPGELIIDKPGKGSFYATDLDLLLRTRGITHLILTGITTDVCVHTTMRDANDRGYECLLLTDCTGATDPANHAAALHMVTMQGGVFGAIAPSAAVLEAL 208
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Match: A0A4R1NE77_9GAMM (Nicotinamidase-related amidase n=1 Tax=Sodalis sp. 159R TaxID=2529856 RepID=A0A4R1NE77_9GAMM) HSP 1 Score: 215 bits (548), Expect = 4.440e-67 Identity = 109/202 (53.96%), Postives = 141/202 (69.80%), Query Frame = 2
Query: 104 GGYVDTIGS--TRTKLEIARISGSIFRSKTFAAARKTCFTLIHTQEGHRPDLTDCPLNKWWRSQQIGAGIGDNGPCGRRERQTFSSTAKGEPGWEIIPELAPAGGELMIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYEC----DCCAATDPLNHTAVISMIKKQGDVFSAVSTSAALINAMK 691
GGYVD++G + T+ I I+ + AA R FT+IHT+EGHRPDL+D P+NK WRSQ+IGAGIGD+GPCGR +GEPGW+IIPEL+P GE++IDKP + +F TDL+L+LR RG+ NL+LTG+T DV +HT MR AND G+EC DCC ATD NH A +SM+K QG VF AV +A LI+ ++
Sbjct: 39 GGYVDSMGYDLSLTRAPIEPIASVL------AAMRPLGFTIIHTREGHRPDLSDLPVNKRWRSQRIGAGIGDDGPCGR-------ILVRGEPGWDIIPELSPLAGEIIIDKPGKGSFYATDLELILRTRGIVNLILTGITTDVCVHTTMREANDRGFECLLLEDCCGATDYSNHLAAVSMVKMQGGVFGAVGDAAMLIDVLE 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6156.13873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6156.13873.1 >prot_H-paniculata_contig6156.13873.1 ID=prot_H-paniculata_contig6156.13873.1|Name=mRNA_H-paniculata_contig6156.13873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp MIDKPSQRAFVGTDLDLMLRRRGVKNLVLTGVTADVRLHTIMRSANDMGYback to top mRNA from alignment at H-paniculata_contig6156:6634..8899- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6156.13873.1 ID=mRNA_H-paniculata_contig6156.13873.1|Name=mRNA_H-paniculata_contig6156.13873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2266bp|location=Sequence derived from alignment at H-paniculata_contig6156:6634..8899- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6156:6634..8899- >mRNA_H-paniculata_contig6156.13873.1 ID=mRNA_H-paniculata_contig6156.13873.1|Name=mRNA_H-paniculata_contig6156.13873.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at H-paniculata_contig6156:6634..8899- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |