prot_H-paniculata_contig61401.13850.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61401.13850.1
Unique Nameprot_H-paniculata_contig61401.13850.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
[Close]
BLAST of mRNA_H-paniculata_contig61401.13850.1 vs. uniprot
Match: A0A800KL24_9BACT (Uncharacterized protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A800KL24_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 7.820e-6
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 0 
Query:    1 LFSNIFNGYDHQAFSVVEPTCIDNYFSHVHEIGHNLGCLHDR 42
            L +N+  G+   AFSV   +C   Y+S  HEIGHN+GC HDR
Sbjct:  284 LMTNVSQGFASSAFSVTLDSCSTGYYSFGHEIGHNMGCTHDR 325
[Close]
BLAST of mRNA_H-paniculata_contig61401.13850.1 vs. uniprot
Match: A0A7S1FW70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FW70_9STRA)

HSP 1 Score: 46.6 bits (109), Expect = 9.930e-5
Identity = 20/38 (52.63%), Postives = 24/38 (63.16%), Query Frame = 0 
Query:    5 IFNGYDHQAFSVVEPTCIDNYFSHVHEIGHNLGCLHDR 42
            +F+GY     +VV   C   YFS  HEIGHNLGC H+R
Sbjct:   35 MFSGYSSLGMNVVNHVCATGYFSFGHEIGHNLGCEHNR 72
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61401.13850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A800KL24_9BACT7.820e-650.00Uncharacterized protein n=3 Tax=cellular organisms... [more]
A0A7S1FW70_9STRA9.930e-552.63Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 5..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61401contigH-paniculata_contig61401:519..650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61401.13850.1mRNA_H-paniculata_contig61401.13850.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61401 519..650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61401.13850.1 ID=prot_H-paniculata_contig61401.13850.1|Name=mRNA_H-paniculata_contig61401.13850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
LFSNIFNGYDHQAFSVVEPTCIDNYFSHVHEIGHNLGCLHDRGD
back to top