prot_H-paniculata_contig6124.13829.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6124.13829.1
Unique Nameprot_H-paniculata_contig6124.13829.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length416
Homology
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BLAST of mRNA_H-paniculata_contig6124.13829.1 vs. uniprot
Match: D8LGW6_ECTSI (Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGW6_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.050e-26
Identity = 65/113 (57.52%), Postives = 78/113 (69.03%), Query Frame = 0 
Query:  304 KVAVCGERLSVQHLRIARGSLLARCMDGWRRCASEGHRERCKIILAVSHAKKALMVRVLNAWRGETRRRLNSRGLRAADMKLEAISKEIIGRYEAELANTRTALEEAHRQITL 416
            K  V GERLS  H R   GS LARC+  WR  A+    ER K + A  HA++ LM R L AWRGETR+R+NSRG + AD+KL AISKEIIGRYE EL++TR AL++A  QI L
Sbjct:   10 KAEVFGERLSALHARTHGGSYLARCLCAWRGEAARIRAERSKNVTAGDHARRKLMSRTLGAWRGETRQRINSRGRKEADLKLHAISKEIIGRYETELSSTRAALDDAISQIAL 122
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6124.13829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGW6_ECTSI1.050e-2657.52Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 263..297
NoneNo IPR availableCOILSCoilCoilcoord: 393..413

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6124contigH-paniculata_contig6124:1973..12323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6124.13829.1mRNA_H-paniculata_contig6124.13829.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6124 1973..12324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6124.13829.1 ID=prot_H-paniculata_contig6124.13829.1|Name=mRNA_H-paniculata_contig6124.13829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=416bp
LIKETNVRNQAQHCRTSTHTHRRQITPPTHMAQDMSGKEPPLPCNTSARI
RNLSEEDAWRARQVLASSKKRLQRSSSNGGLAEGSSPPAGLSVCSRPLSA
GNDIGIGVVTETFRGAAACHSKSHASSPDEKWAIPEEPGRIHGNARAGVN
RGYESDSDVGDARTLNNESLEYTASVRSSTPMRAQVGDPSPSLKGTALVR
NRSSPRSRPIENEARYDHNHEFHLDDDLRVLTHALREEFELKIVGTAREA
LRSAVNKAQREGRQRLAEQRAESAREFRCLQEEAAGLRAEMANLQGVKAA
LVHKVAVCGERLSVQHLRIARGSLLARCMDGWRRCASEGHRERCKIILAV
SHAKKALMVRVLNAWRGETRRRLNSRGLRAADMKLEAISKEIIGRYEAEL
ANTRTALEEAHRQITL
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