mRNA_H-paniculata_contig6124.13829.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6124.13829.1 vs. uniprot
Match: D8LGW6_ECTSI (Centrosomal protein POC5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGW6_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.050e-26 Identity = 65/113 (57.52%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 910 KVAVCGERLSVQHLRIARGSLLARCMDGWRRCASEGHRERCKIILAVSHAKKALMVRVLNAWRGETRRRLNSRGLRAADMKLEAISKEIIGRYEAELANTRTALEEAHRQITL 1248
K V GERLS H R GS LARC+ WR A+ ER K + A HA++ LM R L AWRGETR+R+NSRG + AD+KL AISKEIIGRYE EL++TR AL++A QI L
Sbjct: 10 KAEVFGERLSALHARTHGGSYLARCLCAWRGEAARIRAERSKNVTAGDHARRKLMSRTLGAWRGETRQRINSRGRKEADLKLHAISKEIIGRYETELSSTRAALDDAISQIAL 122 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6124.13829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6124.13829.1 >prot_H-paniculata_contig6124.13829.1 ID=prot_H-paniculata_contig6124.13829.1|Name=mRNA_H-paniculata_contig6124.13829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=416bp LIKETNVRNQAQHCRTSTHTHRRQITPPTHMAQDMSGKEPPLPCNTSARIback to top mRNA from alignment at H-paniculata_contig6124:1973..12324+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6124.13829.1 ID=mRNA_H-paniculata_contig6124.13829.1|Name=mRNA_H-paniculata_contig6124.13829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10352bp|location=Sequence derived from alignment at H-paniculata_contig6124:1973..12324+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6124:1973..12324+ >mRNA_H-paniculata_contig6124.13829.1 ID=mRNA_H-paniculata_contig6124.13829.1|Name=mRNA_H-paniculata_contig6124.13829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig6124:1973..12324+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |