mRNA_H-paniculata_contig609.13789.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 133 bits (334), Expect = 5.940e-35 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 4 TIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLV 303
TIDA WY++WY D LPA+K MPWL + VVVQQDGA+PHTG P LN G GW V LVTQPAQSPD NINDLG FASLK RVW SID LV
Sbjct: 265 TIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A081AGH7_PHYPR (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A081AGH7_PHYPR) HSP 1 Score: 84.3 bits (207), Expect = 1.090e-17 Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 49 LPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
+P++K + W G+ V +Q D A PH D P + DGGW +++ QPA SPDFN+NDLGFFAS++S +++ +I+ LV V+ Y+ + +T++ V LQ+V
Sbjct: 22 IPSVK--VVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSV 128
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 84.3 bits (207), Expect = 6.320e-17 Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 49 LPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
+P++K + W G+ V +Q D A PH D P + DGGW +++ QPA SPDFN+NDLGFFAS++S +++ +I+ LV V+ Y+ + +T++ V LQ+V
Sbjct: 123 IPSVK--VVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSV 229
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A024T8J6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8J6_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 9.430e-17 Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1
Query: 1 VTIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
V +DA Y+++ +PA+KG P + VV+Q D ATPH G T L + D GW L QP SPD N+ DLGFFAS++S ++ S+D ++ ++ CD+ +L V LQAV
Sbjct: 7 VNVDAEVYRDYIFTRVIPAIKGKFP-TSTKRVVIQHDNATPH-GGITNEDLASVSTD-GWTFVLRRQPPNSPDLNVLDLGFFASIQSLQYKLVSRSVDDVIRATLVAFELCDSESLAKVFLTLQAV 129
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: V9F261_PHYPR (DDE_3 domain-containing protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9F261_PHYPR) HSP 1 Score: 84.0 bits (206), Expect = 2.550e-16 Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 49 LPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
+P++K W G+ V +Q D A PH D P + DGGW +++ QPA SPDFN+NDLGFFAS++S +++ +I+ LV V+ Y+ + +T++ V LQ+V
Sbjct: 3 IPSVKA--VWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVSNVEEAYNQLEYSTIDKVFVTLQSV 109
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A6G0WL62_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WL62_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 5.170e-16 Identity = 45/126 (35.71%), Postives = 64/126 (50.79%), Query Frame = 1
Query: 1 VTIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
+T+ Y+++ + +P +K P + + +QQD A PH D P L G GW + L +QPA SPDFN+ DLGFF S+++ RE ID LV V +D D L+ LQ V
Sbjct: 52 ITVTKKVYRQYLLEHVIPTIKKVWPGRRSQAIYIQQDNARPHDEVDGPAVLM-AGSSEGWTIQLASQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWRVLDKTLSTLQGV 176
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A485KWU1_9STRA (Aste57867_12674 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWU1_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.840e-16 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 1 VTIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
V +DA Y+++ + +PA+K + P + VV+Q D ATPH G+ T R L + D GW + QP SPD N+ DLGFFAS++S ++ ++D ++ +DA + LE V LQAV
Sbjct: 27 VNVDAAVYRDFVINKVVPAIKASFP-SASKRVVLQHDNATPH-GSVTDRDLEAVSSD-GWTFVVRAQPPNSPDLNVLDLGFFASIQSLQYKTMSRTVDDVIRSTLAAFDALCSDKLECVFLTLQAV 149
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.390e-15 Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 1 VTIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYD 327
+T+ Y+ + D +PA++ P G + VQQD A PH D P L GR GW + L+ QPAQSPDFN+ DLGFF +++S + +ID L++ V+ ++
Sbjct: 259 MTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFE 366
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A6A4Z8Y7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Z8Y7_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.680e-15 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 1 VTIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAV 378
V +DA Y+++ + +PA+K + P + VV+Q D ATPH G+ T R L + D GW + QP SPD N+ DLGFFAS++S ++ ++D ++ +DA + LE V LQAV
Sbjct: 149 VNVDAAVYRDFVINKVVPAIKASFP-SASKRVVLQHDNATPH-GSVTDRDLEAVSSD-GWTFVVRAQPPNSPDLNVLDLGFFASIQSLQYKTMSRTVDDVIRSTLAAFDALCSDKLECVFLTLQAV 271
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Match: A0A6A3WM28_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WM28_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.460e-15 Identity = 43/130 (33.08%), Postives = 69/130 (53.08%), Query Frame = 1
Query: 1 VTIDAMWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGRDGGWKVNLVTQPAQSPDFNINDLGFFASLKSRVWRERYGSIDCLVERVKTMYDACDAATLEAVAEPLQAVQSGL 390
V++ + Y++ D LPA + +P G V VQQD A PH D ++ G+ GWK+ + QP +SP+ N+ DLGFFAS+++ +R+ + L+E V+ +D TL+ LQ V +
Sbjct: 51 VSMTRVLYRKLLVDKVLPAFRAKLPVRRGTTVFVQQDNAGPHVREDDT-EVETAGKVDGWKIKMRCQPPRSPELNVLDLGFFASIQALQYRKAKYDTNGLIEAVQEAFDEVKWQTLDKCFVTLQKVMEAI 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig609.13789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig609.13789.1 >prot_H-paniculata_contig609.13789.1 ID=prot_H-paniculata_contig609.13789.1|Name=mRNA_H-paniculata_contig609.13789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp MWYQEWYKDSFLPALKGNMPWLEGEEVVVQQDGATPHTGNDTPRKLNEIGback to top mRNA from alignment at H-paniculata_contig609:5429..5836- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig609.13789.1 ID=mRNA_H-paniculata_contig609.13789.1|Name=mRNA_H-paniculata_contig609.13789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=408bp|location=Sequence derived from alignment at H-paniculata_contig609:5429..5836- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig609:5429..5836- >mRNA_H-paniculata_contig609.13789.1 ID=mRNA_H-paniculata_contig609.13789.1|Name=mRNA_H-paniculata_contig609.13789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig609:5429..5836- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |