prot_H-paniculata_contig59868.13643.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig59868.13643.1
Unique Nameprot_H-paniculata_contig59868.13643.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: A0A329SN38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SN38_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.550e-9
Identity = 38/115 (33.04%), Postives = 62/115 (53.91%), Query Frame = 0
Query:   72 WVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNWSDLLCRKIGKHDFL 185
            W+ DSGATAHMTP    +F+YE    N+ VT+A+G+ + + G G + +   D   I    +  V H+PGLD  L S+  +  +G++V  ++    I   + +    +K+GK   L
Sbjct:  263 WLIDSGATAHMTPHRNDLFEYEDLEENIEVTIADGKKIRVVGTGSVRLMGIDGKRI---KMVEVLHIPGLDRRLLSVGKLAERGMSVEFQQNSCVIWYKSTAIASAKKVGKAYML 374          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: A0A3M6VPY8_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPY8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.340e-8
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 0
Query:   72 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNWSDLLCRKIGKHDFL 185
            W+ DSGATAHMTP  E +FDY+   +++ VT+A+G+ + + G G + +   D   I       V H+PGLD  L S+  +  +GL V  +     I     +    +K+GK   L
Sbjct:  160 WLIDSGATAHMTPHREDLFDYKNLVTSIEVTIADGKKIRVVGTGSVRLTGIDGKRIRMLD---VLHIPGLDRRLLSVGKLAERGLNVEFERTSCIIWNKKQATASGKKVGKAYIL 271          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: A0A225UGS0_9STRA (Integrase, catalytic core protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGS0_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.820e-8
Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   72 WVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNWSDLLCRKIGK 181
            W+ DSGATAHMTP  + +F+Y   S +++VT+A+G+ + + G G + +   D   I    +  V ++PGLD  L S+  +  +G++V  +     I   + +    +KIGK
Sbjct:  245 WLIDSGATAHMTPHRDDLFEYSAMSKDMYVTIADGKKIRVAGTGSVRLTGIDAKSIR---MVEVLYIPGLDRRLLSVGKLAERGMSVEFQRNSCVIWDKSKAVASGKKIGK 352          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: F2UPM9_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPM9_SALR5)

HSP 1 Score: 62.4 bits (150), Expect = 5.250e-8
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   62 PVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGK-MLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVN--QGLTVCLKEEGAAIALPNWS-DLLCRKIGKHDFLVAT 188
            PVP     + W+ADSGATAH+T    L+ +Y   +   VTVAN +T+ + G G  +L  T   G     +L  V HVP +  NL +L +V    +G +V +  + + I    WS  LL  K   H FL A+
Sbjct:  406 PVPP----QLWLADSGATAHITSDASLLTNYVAVTQ-HVTVANSQTVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 531          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: A0A6A3X5U6_9STRA (CCHC-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X5U6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.040e-8
Identity = 37/115 (32.17%), Postives = 64/115 (55.65%), Query Frame = 0
Query:   72 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNWSDLLCRKIGKHDFL 185
            W+ DSGATAHMTP    +F+Y+   SN+ VT+A+G+ + + G G + +   D   I       V ++PGLD  L S++ +  +G++V  +++   I   + +    +K+GK   L
Sbjct:  266 WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRIKMID---VLYIPGLDRQLLSVRRLAERGMSVEFQKKSCTIWNKSKAIASGKKVGKVGVL 377          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: A0A6A4BQ03_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BQ03_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.430e-8
Identity = 37/111 (33.33%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   72 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLTVCLKEEGAAIALPNWSDLLCRKIGK 181
            W+ DSGATAHMTP    +F+Y+   SN+ VT+A+G+ + + G G + +   D   I       V ++PGLD  L S+  +  +G++V  +++   I   + +    +KIGK
Sbjct:  242 WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRIKMID---VLYIPGLDRQLLSVSRLAERGMSVEFQKKSCTIWNKSKAIASGKKIGK 349          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: F2UPN0_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPN0_SALR5)

HSP 1 Score: 60.1 bits (144), Expect = 1.500e-7
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 0
Query:   62 PVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGK-MLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVN--QGLTVCLKEEGAAIALPNWS-DLLCRKIGKHDFLVAT 188
            PVP     + W+ADSGATAH+T    L+ +Y   +   VTVAN + + + G G  +L  T   G     +L  V HVP +  NL +L +V    +G +V +  + + I    WS  LL  K   H FL A+
Sbjct:   88 PVPP----QLWLADSGATAHITSDASLLTNYIAVTQ-HVTVANNQAVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 213          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: F2UNK2_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UNK2_SALR5)

HSP 1 Score: 60.8 bits (146), Expect = 1.620e-7
Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   62 PVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGK-MLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVN--QGLTVCLKEEGAAIALPNWS-DLLCRKIGKHDFLVAT 188
            PVP     + W+ADSGATAH+T    L+ +Y   +   VTVAN +T+ + G G  +L  T   G     +L  V HVP +  N+ +L +V    +G +V +  + + I    WS  LL  K   H FL A+
Sbjct:   77 PVPP----QLWLADSGATAHITSDASLLTNYIAVTQ-HVTVANNQTVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNILALNLVTRARRGASVVIAVDDSRIQFATWSVPLLPSKDTGHLFLYAS 202          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: A0A2P4XNP3_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XNP3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.750e-7
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   72 WVADSGATAHMTPSNELMFDYE-TCSNLFVTVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVNQGLT 156
            W+ DSGAT+HMTP  E +FD E T S++ VT+A+G+ L + G G + + + +   I    +  V ++PGLD  L S+  +  +GLT
Sbjct:  155 WLIDSGATSHMTPFREDLFDLEGTVSSIEVTIADGKKLRVAGQGTVRLTSLNGKHI---KMMEVLYIPGLDRRLLSVGKLAERGLT 237          
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Match: F2UTC5_SALR5 (Integrase catalytic domain-containing protein n=3 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UTC5_SALR5)

HSP 1 Score: 60.5 bits (145), Expect = 2.400e-7
Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 0
Query:   62 PVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGK-MLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIVVN--QGLTVCLKEEGAAIALPNWS-DLLCRKIGKHDFLVAT 188
            PVP     + W+ADSGATAH+T    L+ +Y   +   VTVAN + + + G G  +L  T   G     +L  V HVP +  NL +L +V    +G +V +  + + I    WS  LL  K   H FL A+
Sbjct:  428 PVPP----QLWLADSGATAHITSDASLLTNYVAVTQ-HVTVANSQAVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 553          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig59868.13643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A329SN38_9STRA1.550e-933.04Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A3M6VPY8_9STRA1.340e-833.91CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A225UGS0_9STRA3.820e-832.43Integrase, catalytic core protein (Fragment) n=1 T... [more]
F2UPM9_SALR55.250e-835.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3X5U6_9STRA6.040e-832.17CCHC-type domain-containing protein n=5 Tax=Phytop... [more]
A0A6A4BQ03_9STRA9.430e-833.33Retrovirus-related Pol polyprotein from transposon... [more]
F2UPN0_SALR51.500e-735.11Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
F2UNK2_SALR51.620e-735.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P4XNP3_9STRA1.750e-739.53Integrase catalytic core protein n=1 Tax=Phytophth... [more]
F2UTC5_SALR52.400e-735.11Integrase catalytic domain-containing protein n=3 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig59868contigH-paniculata_contig59868:301..864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig59868.13643.1mRNA_H-paniculata_contig59868.13643.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig59868 284..864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig59868.13643.1 ID=prot_H-paniculata_contig59868.13643.1|Name=mRNA_H-paniculata_contig59868.13643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MNCPQRICPICKGIGHGESSHRLSAMFSSDGFRDIVEHGFTARVAGQGEF
ASVIELIEEDKPVPVDGCEEFWVADSGATAHMTPSNELMFDYETCSNLFV
TVANGETLPIEGYGKMLVWTEDRGEIHKFSLSRVAHVPGLDTNLFSLQIV
VNQGLTVCLKEEGAAIALPNWSDLLCRKIGKHDFLVAT
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