prot_H-paniculata_contig5963.13609.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5963.13609.1
Unique Nameprot_H-paniculata_contig5963.13609.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length490
Homology
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BLAST of mRNA_H-paniculata_contig5963.13609.1 vs. uniprot
Match: A0A6H5JJT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT3_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 7.270e-32
Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:  307 RNLQEEECSAACLTHSTQTCYNDPDCATGGLGCNALDDPLCRFCGFEG-FGACPE-LPTNSPAATPAPTEVSNRQECSASCLTAKVLVCYDDPSCSI--GGLGCNARGDFYCRFCGF-DDFHDCP 426
            R LQ E+CSA CLT  T+ C N+  C TGG+GCNA DDPLC+FC     +  C E  PT +PA +PAPT   +  ECS+ CL ++   C+DDPSC     G+GCNA GDFYCRFCGF ++F DCP
Sbjct:  188 RKLQLEDCSADCLTSETERCQNNEMCETGGIGCNAQDDPLCQFCDLGAPYVECDEERPTEAPAPSPAPTLDPDYVECSSRCLESEDFPCFDDPSCPRDGNGIGCNATGDFYCRFCGFLEEFVDCP 312
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BLAST of mRNA_H-paniculata_contig5963.13609.1 vs. uniprot
Match: D8LSN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN4_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 8.580e-30
Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:  307 RNLQEEECSAACLTHSTQTCYNDPDCATGGLGCNALDDPLCRFCGFEG-FGACPE-LPTNSPAATPAPTEVSNRQECSASCLTAKVLVCYDDPSCSI--GGLGCNARGDFYCRFCGF-DDFHDCP 426
            R LQ E+CSA CLT  T+ C N+  C TGG+GCNA DDPLC+FC     +  C E  PT +PA +PAPT   +  ECS+ CL ++   C+DDPSC     G+GCNA GDFYCRFCGF ++F DCP
Sbjct:  246 RKLQLEDCSADCLTSDTERCQNNEMCETGGIGCNAQDDPLCQFCDLGAPYVECDEERPTEAPAPSPAPTLDPDYVECSSRCLESEDFPCFDDPSCPRDGNGIGCNASGDFYCRFCGFLEEFVDCP 370
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BLAST of mRNA_H-paniculata_contig5963.13609.1 vs. uniprot
Match: R1CM16_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CM16_EMIHU)

HSP 1 Score: 59.3 bits (142), Expect = 9.790e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:  317 ACLTHSTQTCYNDPDCATGGLGCNALDDPLCRFCGFEGF 355
            +C  +  +TC+ DP+CATGGLGC A   PLCRFCGF G+
Sbjct:  449 SCTGNPFETCFYDPNCATGGLGCAAGGKPLCRFCGFGGY 487
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5963.13609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JJT3_9PHAE7.270e-3254.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN4_ECTSI8.580e-3054.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
R1CM16_EMIHU9.790e-658.97Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..490
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 37..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5963contigH-paniculata_contig5963:3992..7107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5963.13609.1mRNA_H-paniculata_contig5963.13609.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5963 3992..7456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5963.13609.1 ID=prot_H-paniculata_contig5963.13609.1|Name=mRNA_H-paniculata_contig5963.13609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=490bp
MTRRGIEGSSRRRRLLPPCTAMIEAVAATLLLSCSAGLVRPAQASLAHLR
GEEISTSSPLPARLYTKEVFSTSDSACALACVNGGLAGGGGESACSRNAL
EMEIWVYGGIGARVVGAELEVWSVVEQDEDWLQLTTATDANLEVRYAIRP
ISSVVAEGGSVADGSSFTISVGVDLATASEFISLVLLLEGCGLISANILG
TAVSAIASVGRGDDDGHNEEWGGTNKESSSRVDEGLSLHQRKVGQGGDVV
GESTLLQLERKPLEHIGADGGLLRLKAAAGVVTERIGAAQVQQQPEPSRE
RKLRGSRNLQEEECSAACLTHSTQTCYNDPDCATGGLGCNALDDPLCRFC
GFEGFGACPELPTNSPAATPAPTEVSNRQECSASCLTAKVLVCYDDPSCS
IGGLGCNARGDFYCRFCGFDDFHDCPFTPTPATPAPVTVPTVAPGDVPTT
APLNLPTTAPLHLPTNPPLYLPTNPPLYLPTNPPLYLPTN
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