mRNA_H-paniculata_contig596.13604.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig596.13604.1
Unique NamemRNA_H-paniculata_contig596.13604.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 5.420e-68
Identity = 111/246 (45.12%), Postives = 149/246 (60.57%), Query Frame = 1
Query:   10 LGVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADFILDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRPYPSRDFDGKIGIWHVCAIKRA*RNSVR---------REGG--------------QQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            L  G   ++RW  ++GA +   RI PSLS   +++R DFI D+       +     ++H+DE+WFYL  ++++VR+F GE+     +V H+SH+PK M+I A  RP P+ DFDGKIGIW +C I+ A R+S +         R G               ++YEFD TI+AEWY++WY D  L A+KE MP L+ + VV QQDGA+PHTGK     LN  G   GW V LVTQPAQSPDL INDLG
Sbjct:   98 LEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLG 343          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.990e-29
Identity = 75/229 (32.75%), Postives = 114/229 (49.78%), Query Frame = 1
Query:   13 GVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADFI---LDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRP---YPSRD-FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            G+ S+ L R L+     R   R+ P ++  H+ +R +F+   +  +   ++ +      +HIDE WFYL+    R  ++  E+ V   K   K HI K M + AV RP   Y  R  +DGKIG+W   ++  A R S  RE G      VT+  + Y+E+  +  +  +K+  PG +   +  QQD A PH   D    +   G  +GWS+ LV QPA SPD  + DLG
Sbjct:  111 GIPSTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDED-VPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAA-VTLAGHSDGWSIQLVAQPAMSPDFNVLDLG 337          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.290e-29
Identity = 74/229 (32.31%), Postives = 108/229 (47.16%), Query Frame = 1
Query:   13 GVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADF---ILDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRPYPS----RDFDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            GV  + L R +K     R   R+ P L+  HR  R +F    +    + R  +      +HIDE WFY++    R  ++  +E     K Q K HI K M + AV RP       + +DGK+G+W     + A R S  R+ G      +T+    Y+ +  D  + A++   PG +G  +  QQD A PH   D    L   G  EGW++ L+ QPAQSPD  + DLG
Sbjct:  111 GVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLW-HDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLG 337          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.350e-27
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 1
Query:   76 RITPSLSLTHRKNRADFI---LDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRP-YPSRD---FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            R+ P L+  H+ +R  F+   L   A  +  +      +HIDE WFY++    R  ++  +E V + K + K HI K M + AV RP Y +R+   +DG+IG+W     + A R+S  R+ G       T+  + Y+ +  D  + A++   P  K  ++  QQD A PH   +    +   G   GW+++L +QPAQSPDL + DLG
Sbjct:    7 RLKPMLTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLG 212          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A6A5ATA6_9STRA (HTH_Tnp_Tc3_2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ATA6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.560e-27
Identity = 71/232 (30.60%), Postives = 111/232 (47.84%), Query Frame = 1
Query:    4 VCLGVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADF---ILDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRP---YPSRD-FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            V  G+  + L R L+     R   R+ P ++  H+ +R  F    +   + N + +   +  +HIDE WFYL+    R  ++  +E     K   K HI K M + AV RP   Y  +  +DGK+G+W   A++ A R S  R  G      + +   +Y+++  D  + A+K+  PG +   +  QQD A PH   D    +   G  +GW + LV QPA SPD  + DLG
Sbjct:  108 VSSGIPRTTLWRVLQTKKLQRRTSRLKPMVTEKHKADRLAFARSFVHGTSCNGMVWHDMYDRVHIDEKWFYLTEVNRRYYLW-HDESTPVRKCNSKRHIIKVMFLTAVARPRFDYARKTMWDGKVGMWPFVAVRPAQRKSKNRARGALITTPIVVTKPFYRQYLLDHVIPAIKQAWPGPRAHPIYIQQDNARPHVEVDDAA-VTAAGCSDGWKIQLVAQPAMSPDFNVLDLG 337          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A6A5A8R5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A8R5_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.490e-27
Identity = 77/228 (33.77%), Postives = 109/228 (47.81%), Query Frame = 1
Query:   13 GVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADFILD--QAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRP-YPSRD---FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            G+  + L R LK     R   RI P L+ T ++ RA F     + ARN++ +      +HIDE WFY++    R  ++  +E V   K   K HI K M + AV RP Y S     +DGKIG+W       A R+   R  G      +T+    Y+ +     + ++K   PG +   +  QQD A PH G D L  +   G  +GW + LV QPA SPD  + DLG
Sbjct:  105 GIPKTSLWRLLKPKKLKRRTSRIKPMLTETQKEARAVFARSFLREARNQMHWHDMLDRVHIDEKWFYVTLINRRYYLW-HDEPVPVRKGASKRHIVKVMFLTAVARPRYDSAKKSTWDGKIGMWPFVTKAPAKRSRKNRVRGTIVTTPMTVTKPIYRHFLLQHVIPSIKLLWPGRRDNPIYIQQDNARPHVGVDDLAMV-AAGCSDGWHIQLVAQPAMSPDFNVLDLG 330          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.580e-27
Identity = 74/228 (32.46%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   13 GVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADFILDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRPYPSRD----FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMP-GLKGEEVVAQQDGATPHTGKDTLRK-LNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            G+  S L R ++     +      P L+  ++  R ++IL+    N   F   F+ IHIDE WFYL   +    + PGE   +ST  + K+H+ K M + A  RP    +    FDGKIGIW     + A R+SV R  G        ++ E Y+    +  L A+ E  P G    E+  Q+D A PH  K T+R+ +    + +GW++ + TQP  SPD+ + DLG
Sbjct:  211 GIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNG-RFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPH--KATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLG 434          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: W4FC38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FC38_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.410e-26
Identity = 68/232 (29.31%), Postives = 106/232 (45.69%), Query Frame = 1
Query:    4 VCLGVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADF---ILDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRPYPSRD----FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMPGLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            V  G+  + L R L+     R   R+ P ++  ++ +R  F    + + A N + +      +HIDE WFYL+    R      +E     K + K HI K M + AV RP         +DGK+G+W   ++  A R+S  R  G      + +    Y+++  D  +  +K+  PG +   +  QQD A PH   D    +   G  +GW + LV QPA SPD  + DLG
Sbjct:   70 VSSGIPRTTLWRILQTKKLQRRTSRLKPMVTDQYKADRVAFARSFVQETANNDMVWHEMCDCVHIDEKWFYLTEVNRRYYYLWHDEATPVRKCKPKRHIIKVMFLAAVARPRFDHARKTMWDGKVGMWPFVSVLPAQRSSKNRARGTLITTPIVVTKPLYRQYLLDHVIPTIKQAWPGPRAHPIYIQQDNARPHVEVDDAA-VTAAGCSDGWKIQLVAQPAMSPDFNVLDLG 300          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: A0A6A3EEJ7_9STRA (Uncharacterized protein n=8 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3EEJ7_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.760e-26
Identity = 77/223 (34.53%), Postives = 108/223 (48.43%), Query Frame = 1
Query:   31 LQRWLKEMGATRVKRRITPSLSLTHRKNRADFILDQAARN---RITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTK-----VQHKSHIPKAMLIYAVLRPYPSRDFDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDVTINAEWYQEWYNDSFLAALKENMP-GLKGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKIND 672
            + R  KE    R  RR  P LSL H  +R  + +D+  R    R  F   + ++H+DE WFY+      V +  G++ V S +     VQ+K HI K M + AV RP    D+DGK+GIW V    R  R S  R  G      VT+  E  ++   +  + A+KE  P   KG  +  QQD A PH  ++    +   G   GW++  + QPAQSPDL   D
Sbjct:  110 INRLYKEGYLRRALRRTRPLLSLKHMSDRLKYCVDRVQRTMDGRHFFDPMYDVVHLDEKWFYMKKVGKHVYILTGKDDVPSEEPPVQFVQNKRHIKKVMFLCAVARP--RGDWDGKVGIWPVVKNYRTQRWSRNRPAGIDEVHPVTMAREIDRDMLINDVIPAIKEKWPQAQKGISIRLQQDNAKPHVLENDAAVI-AAGCSNGWTMYPLNQPAQSPDLNCLD 329          
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU)

HSP 1 Score: 115 bits (287), Expect = 4.080e-26
Identity = 74/228 (32.46%), Postives = 108/228 (47.37%), Query Frame = 1
Query:   13 GVGSSKLQRWLKEMGATRVKRRITPSLSLTHRKNRADFILDQAARNRITFRSGFQIIHIDEAWFYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRPYPSRD----FDGKIGIWHVCAIKRA*RNSVRREGGQQYEFDV-TINAEWYQEWYNDSFLAALKENMPGL-KGEEVVAQQDGATPHTGKDTLRKLNEFGSDEGWSVNLVTQPAQSPDLKINDLG 678
            G+  + L  ++K+    R    + P L+  ++K R +F L     +   F   +  IHIDE WFYL     +  +  GE    ST  + K  I K M + AV RP    D    FDGKIGIW     + A RNSV R  G     ++ ++NA  YQ+   +  L A++E  P   K   +  Q+D A PH  +     + E   + GW++ + TQP  SPD  + DLG
Sbjct:  178 GIARTTLGNYVKKGQILRHSGAVKPFLTEKNKKARVEFALSLIKPDG-KFEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLRSRAA-VREAAREAGWNITVTTQPPNSPDFNVLDLG 402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig596.13604.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE5.420e-6845.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485KDC6_9STRA1.990e-2932.75Aste57867_3131 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6A5AA16_9STRA2.290e-2932.31Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6A4Z9D8_9STRA1.350e-2732.21Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A5ATA6_9STRA1.560e-2730.60HTH_Tnp_Tc3_2 domain-containing protein (Fragment)... [more]
A0A6A5A8R5_9STRA4.490e-2733.77Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A448ZNT1_9STRA7.580e-2732.46Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
W4FC38_9STRA1.410e-2629.31Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A3EEJ7_9STRA1.760e-2634.53Uncharacterized protein n=8 Tax=Phytophthora fraga... [more]
I6THG9_PSEMU4.080e-2632.46Tranposase n=1 Tax=Pseudo-nitzschia multiseries Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig596contigH-paniculata_contig596:12127..12804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score67.8
Seed ortholog evalue3.8e-09
Seed eggNOG ortholog161934.XP_010675654.1
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size678
Cds size342
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig596.13604.1prot_H-paniculata_contig596.13604.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig596 12412..12753 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930656.8007228-UTR-H-paniculata_contig596:12126..124111622930656.8007228-UTR-H-paniculata_contig596:12126..12411Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig596 12127..12411 -
1691481392.3343678-UTR-H-paniculata_contig596:12126..124111691481392.3343678-UTR-H-paniculata_contig596:12126..12411Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig596 12127..12411 -
1622930656.8303087-UTR-H-paniculata_contig596:12753..128041622930656.8303087-UTR-H-paniculata_contig596:12753..12804Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig596 12754..12804 -
1691481392.3588586-UTR-H-paniculata_contig596:12753..128041691481392.3588586-UTR-H-paniculata_contig596:12753..12804Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig596 12754..12804 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930656.815542-CDS-H-paniculata_contig596:12411..127531622930656.815542-CDS-H-paniculata_contig596:12411..12753Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig596 12412..12753 -
1691481392.3500996-CDS-H-paniculata_contig596:12411..127531691481392.3500996-CDS-H-paniculata_contig596:12411..12753Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig596 12412..12753 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig596.13604.1

>prot_H-paniculata_contig596.13604.1 ID=prot_H-paniculata_contig596.13604.1|Name=mRNA_H-paniculata_contig596.13604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MGATRVKRRITPSLSLTHRKNRADFILDQAARNRITFRSGFQIIHIDEAW
FYLSCDRDRVRMFPGEERVESTKVQHKSHIPKAMLIYAVLRPYPSRDFDG
KIGIWHVCAIKRA*
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mRNA from alignment at H-paniculata_contig596:12127..12804-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig596.13604.1 ID=mRNA_H-paniculata_contig596.13604.1|Name=mRNA_H-paniculata_contig596.13604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=678bp|location=Sequence derived from alignment at H-paniculata_contig596:12127..12804- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGTTTGTCTCGGAGTTGGCAGTTCAAAGCTTCAGCGATGGCTCAAAGA GATGGGCGCCACAAGGGTGAAACGGCGCATTACCCCATCTCTGTCGCTGA CTCACCGAAAGAACCGAGCAGACTTTATCCTGGACCAAGCAGCAAGGAAC CGCATCACTTTCAGGAGCGGCTTCCAAATAATTCACATTGATGAAGCGTG GTTTTACCTAAGTTGCGACAGGGATCGCGTCCGCATGTTCCCCGGGGAGG AAAGGGTGGAGTCCACTAAAGTACAGCACAAGAGTCATATTCCTAAGGCG ATGTTGATCTACGCCGTCTTGCGTCCATATCCTTCCCGCGATTTCGACGG CAAGATTGGAATCTGGCACGTTTGCGCCATCAAGCGGGCATAAAGGAATT CGGTCCGGCGTGAAGGGGGGCAGCAATACGAGTTCGACGTGACCATTAAC GCCGAGTGGTATCAGGAGTGGTACAACGACTCTTTTCTCGCAGCATTGAA GGAAAACATGCCGGGGTTGAAGGGTGAGGAAGTGGTCGCGCAGCAGGACG GAGCGACCCCCCACACGGGGAAAGACACGCTGCGGAAGCTAAACGAATTC GGGAGCGACGAGGGGTGGAGCGTCAATCTCGTAACTCAGCCCGCGCAGTC ACCAGATCTCAAAATCAATGATTTGGGT
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Coding sequence (CDS) from alignment at H-paniculata_contig596:12127..12804-

>mRNA_H-paniculata_contig596.13604.1 ID=mRNA_H-paniculata_contig596.13604.1|Name=mRNA_H-paniculata_contig596.13604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=684bp|location=Sequence derived from alignment at H-paniculata_contig596:12127..12804- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGCCACAAGGGTGAAACGGCGCATTACCCCATCTCTGTCGCTGAC
TCACCGAAAGAACCGAGCAGACTTTATCCTGGACCAAGCAGCAAGGAACC
GCATCACTTTCAGGAGCGGCTTCCAAATAATTCACATTGATGAAGCGTGG
TTTTACCTAAGTTGCGACAGGGATCGCGTCCGCATGTTCCCCGGGGAGGA
AAGGGTGGAGTCCACTAAAGTACAGCACAAGAGTCATATTCCTAAGGCGA
TGTTGATCTACGCCGTCTTGCGTCCATATCCTTCCCGCGATTTCGACGGC
AAGATTGGAATCTGGCACGTTTGCGCCATCAAGCGGGCATAAATGGGCGC
CACAAGGGTGAAACGGCGCATTACCCCATCTCTGTCGCTGACTCACCGAA
AGAACCGAGCAGACTTTATCCTGGACCAAGCAGCAAGGAACCGCATCACT
TTCAGGAGCGGCTTCCAAATAATTCACATTGATGAAGCGTGGTTTTACCT
AAGTTGCGACAGGGATCGCGTCCGCATGTTCCCCGGGGAGGAAAGGGTGG
AGTCCACTAAAGTACAGCACAAGAGTCATATTCCTAAGGCGATGTTGATC
TACGCCGTCTTGCGTCCATATCCTTCCCGCGATTTCGACGGCAAGATTGG
AATCTGGCACGTTTGCGCCATCAAGCGGGCATAA
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