mRNA_H-paniculata_contig5934.13565.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A8J5XPH7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPH7_DIALT) HSP 1 Score: 75.1 bits (183), Expect = 1.180e-13 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 3
Query: 168 MNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRYVAP 404
M+PLVRDL KRF+LV + +P G V+ +A ALR A L DE+EIKRAV +GR RE + K KYR ++KRY +P
Sbjct: 1 MHPLVRDLYKRFLLVGKDYPGGLALVRRKAKEALRNQAHLQDELEIKRAVARGRWMVRELQGIIKLKKYREMKKRYSSP 79
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A2R5GAV0_9STRA (Electron transfer flavoprotein regulatory factor 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAV0_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.460e-11 Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 3
Query: 168 MNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRY 395
M+PLVRDL KR + V + +P G +VK +A + +NA LTDEV+IK+ V +GR RE + K KYR L+KRY
Sbjct: 1 MHPLVRDLYKRLLTVGKEYPQGLDWVKSKAKPWIMQNAALTDEVDIKKKVAEGRFWVREMQSVIKLKKYRTLKKRY 76
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: G4YT11_PHYSP (Complex1_LYR_dom domain-containing protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=G4YT11_PHYSP) HSP 1 Score: 65.1 bits (157), Expect = 1.300e-9 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 3
Query: 165 LMNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRY 395
+M+P VRDL KRF+LV R +P G +V+E+A AA +N LTD V IK+A+ +GR RE + KYR L RY
Sbjct: 1 MMDPKVRDLYKRFLLVGRDYPLGLSHVREKAKAAFFQNRDLTDPVAIKKAIKRGRWMVREMVGVIQLKKYRTLNSRY 77
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A485K3V6_9STRA (Aste57867_786 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K3V6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 7.230e-9 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 165 LMNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRY 395
+M+PLVRD KR +LV R +P G YV+E+A A + A LT++ EIKRAV +GR A+E + KYR + +RY
Sbjct: 1 MMHPLVRDAYKRLLLVGRDYPLGLDYVREKAKEAFLKQAHLTNDEEIKRAVHRGRWMAKEMIGVIQLKKYRAMNQRY 77
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A7S4B2S6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2S6_CHRCT) HSP 1 Score: 64.3 bits (155), Expect = 8.160e-9 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 3
Query: 162 SLMNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRYVAP 404
S MNPLVRDL +R ++V +P+G YV+ RA A R+NA + + VE+KRAV GR +E + KYR ++KRY AP
Sbjct: 90 STMNPLVRDLYRRIIVVGADYPAGLDYVRNRAKAEFRKNAHV-EGVELKRAVNYGRYMVKEMIGVIQLKKYREIKKRYEAP 169
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A2P4Y5H8_9STRA (NADH-ubiquinone oxidoreductase complex 1/LYR family protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5H8_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.180e-8 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 3
Query: 165 LMNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRYVA 401
+++P VRDL KRF+LV R +P G +V+E+ A +N GL+D V IK+AV +GR RE + KYR L RY +
Sbjct: 1 MIDPKVRDLYKRFLLVGRDYPLGLSHVREKVKTAFFQNRGLSDPVAIKKAVKRGRWMVREMVGVIQLKKYRTLNSRYTS 79
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: D0N742_PHYIT (Complex1_LYR_dom domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0N742_PHYIT) HSP 1 Score: 61.6 bits (148), Expect = 2.070e-8 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 3
Query: 168 MNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRYVA 401
M+P VRDL KRF+LV R +P G +V+E+ AA + LTD V IK+A+ +GR RE + KYR L RY +
Sbjct: 1 MDPKVRDLYKRFLLVGRDYPLGLSHVREKVKAAFYQKRDLTDPVAIKKAIKRGRWVVREMVGVIQLKKYRTLNSRYTS 78
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: M4BZ20_HYAAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZ20_HYAAE) HSP 1 Score: 61.2 bits (147), Expect = 2.170e-8 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 3
Query: 168 MNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRYVA 401
M+P VRDL KRF+LV R +P G +V+E+ AA N LTD V +K+A+ +GR RE + KYR L RY +
Sbjct: 1 MDPKVRDLYKRFLLVGRDYPLGLNHVREKVKAAFLFNRNLTDPVAMKKAIKRGRWMVREIIGVIQLKKYRTLNSRYTS 78
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A329S5G4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5G4_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.620e-8 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 3
Query: 168 MNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRY 395
M P VRDL KRF+LV R +P G +V+E+ A +N LTD V IK+A+ +GR RE + KYR L RY
Sbjct: 1 MEPKVRDLYKRFLLVGRDYPLGLGHVREKVKVAFFQNRDLTDTVAIKKAIKRGRWMVREMVGVIQLKKYRTLNSRY 76
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Match: A0A6G0WG47_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WG47_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.430e-7 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 3
Query: 168 MNPLVRDLCKRFVLVARRHPSGERYVKERAMAALRRNAGLTDEVEIKRAVVQGRRAAREAEDFAKFCKYRVLRKRY 395
M+PLVRD+ KR ++V R +P G YV+E+A A + A LT + EIKRAV +GR +E + KYR + RY
Sbjct: 1 MHPLVRDVYKRILVVGRDYPMGLDYVREKAKEAFYKEAHLTADEEIKRAVHRGRWMVKEMIGVIQLKKYRTMNARY 76 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5934.13565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5934.13565.1 >prot_H-paniculata_contig5934.13565.1 ID=prot_H-paniculata_contig5934.13565.1|Name=mRNA_H-paniculata_contig5934.13565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MMNKTNYHSTHLLLYLRPFAGHVSLMNPLVRDLCKRFVLVARRHPSGERYback to top mRNA from alignment at H-paniculata_contig5934:1537..2490+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5934.13565.1 ID=mRNA_H-paniculata_contig5934.13565.1|Name=mRNA_H-paniculata_contig5934.13565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=954bp|location=Sequence derived from alignment at H-paniculata_contig5934:1537..2490+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5934:1537..2490+ >mRNA_H-paniculata_contig5934.13565.1 ID=mRNA_H-paniculata_contig5934.13565.1|Name=mRNA_H-paniculata_contig5934.13565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig5934:1537..2490+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |