mRNA_H-paniculata_contig5926.13553.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 296 bits (759), Expect = 2.150e-92 Identity = 152/311 (48.87%), Postives = 198/311 (63.67%), Query Frame = 1
Query: 205 FDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
F DI +S ++ T S FH FCK FA +L+ E++ LPTG+ L M+ YD +GF GAVGSTDVTH WG P + +YTGKEG PT+A++ TVDHSGRVL + +G G ND +I+R+DKAV +R Y YKL +DG + EKG YL+VD H+WR+L+ P+K R +L SKRLES RKDVE +FG LKGRFRI KL + F + +DNV + CCILHNMLHSFD + +WAGS GL +A +D T + +G E VEVE GF +R KL+T++ YR E ++ WL
Sbjct: 97 FADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG--SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 296 bits (759), Expect = 3.140e-91 Identity = 152/311 (48.87%), Postives = 198/311 (63.67%), Query Frame = 1
Query: 205 FDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
F DI +S ++ T S FH FCK FA +L+ E++ LPTG+ L M+ YD +GF GAVGSTDVTH WG P + +YTGKEG PT+A++ TVDHSGRVL + +G G ND +I+R+DKAV +R Y YKL +DG + EKG YL+VD H+WR+L+ P+K R +L SKRLES RKDVE +FG LKGRFRI KL + F + +DNV + CCILHNMLHSFD + +WAGS GL +A +D T + +G E VEVE GF +R KL+T++ YR E ++ WL
Sbjct: 188 FADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG--SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 288 bits (736), Expect = 5.410e-88 Identity = 146/341 (42.82%), Postives = 206/341 (60.41%), Query Frame = 1
Query: 115 RAMQYRISLTVCIRFCYGFWRACGSGERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNG-RNSNGPPERVEVEDGFFFMRRKLITHYTYRVENNEVTWL 1134
R + ++ + C++ + F DI +S ++ TA + FH F + FA +++ E I LPTGD M YD +GF+GA GSTDVTH WG P + YTGKEG+PT+AY+ TVDH+ RVL + G G ND SI+R+D AV +RE Y + + + DG KG YL+VD H+W +L+ P+K + +LA SKRLESVRKDVE FFG +KGRFRILKL + + + +DNV + CCILHNMLHS+D E + +WAG+ GL +AW + + +++L + G + S+ E VEVE GF R++LI + YR N++ WL
Sbjct: 151 RGIPVQLKVLACLQIL---------ARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAW-EHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 267 bits (682), Expect = 2.090e-81 Identity = 139/328 (42.38%), Postives = 190/328 (57.93%), Query Frame = 1
Query: 190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPP---ERVEVEDGFFF----------MRRKLITHYTYRVENNEVTWL 1134
G+ + FDD++QLS M++S AQ FH FC+ FA ++F E I LPTG L M + +G+TGA GSTDVTH W P + +TGKEGFPT+AY+ TVDH GR L + G G ND +I+R+D V +R Y YKLR +G +++ +G +LIVD H W +L+ P+K E+ A S+ LESVRKDV G FRILKL + + + VDN+ + CCILHNMLH+FDGL + E + DW GS G DAW D T + PP E+ E +G ++R+LI + +R + N++TWL
Sbjct: 45 GKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDV--------GCFRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 364
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE) HSP 1 Score: 251 bits (641), Expect = 2.280e-74 Identity = 137/317 (43.22%), Postives = 184/317 (58.04%), Query Frame = 1
Query: 190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENNEVTWLRS 1140
G + FDDI QLS ++E T Q FH F +RFA + F + +K P G L ++ Y VGF G GS D TH + P S H Y GKEGF T+A+E DH R LG++K G +ND +IV FD+ V+ ++ + + + L +DG E E+GLYLIVDG H+ CP + T++ELA K+LESVRKD+E FFG LKGRFRILK+P+L+R +D + CC LHNMLHS+DGL L E D +WAG+ G LD W+ + N P+ ED F ++ KL+T+ + V W RS
Sbjct: 141 GRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNS------PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 250 bits (638), Expect = 8.520e-74 Identity = 134/318 (42.14%), Postives = 190/318 (59.75%), Query Frame = 1
Query: 190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGD--ALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
G + F I LS M+ T Q FH FC+ FA +++ E I LP+ + L M Y+ +GF GA+GSTDVTH W P + YTGKEG PT+ Y+ TV+H+GRVL + +G G ND +I+ D+AV +R + Y + + KDG + KG YLIVD H+WR L+ P+K + +L SKRLESVRKDVE FFG LK RFRILKL + +++ +D V + CCILHNMLH+ DG+ E D++W GS A LQ+ NL ++ + ++ +VE ++RKL T++ YR ++ ++ WL
Sbjct: 136 GRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS-----AELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 248 bits (633), Expect = 2.060e-73 Identity = 134/311 (43.09%), Postives = 179/311 (57.56%), Query Frame = 1
Query: 190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDG-----FFFMRRKLITHYTYR 1107
G + F D+ QLSLM+ TA+ +FH FC F+ L+H+W+ LP G+ L Y +G GAV S D TH +W P S T+ + GKEG+ TL YEA+ DHSGR+L KG G ND ++V+ D +V +RE EP+ S + L D +G G +LIVDG HR SL+CP KE A+ + SKR ES+RKD+E FG LKGRFR+ K +LF +DN + CI+HNMLH FDGL E D+DWAG G D Q + T ++ G EV+DG F R++L+ H Y+
Sbjct: 121 GRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEAD---QTTGAFPVPTAVVDTAGE----EVDDGDNTEAFKLFRQQLVNHVAYK 424
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.630e-70 Identity = 135/346 (39.02%), Postives = 191/346 (55.20%), Query Frame = 1
Query: 190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDA--LAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYR----------------------------SMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
G + F I Q+S M+ T Q FH FC+ FA +++ E I LPT ++ L MK YD +GFTGAVGS DVTH AW P + YTGKEGFPT+AY+ TVDH+GR + + +G G ND +IV +D AV+ + + Y + + ++DG KG YL+VD H+W+ L+ P+K + +L SKRLESVRKDVE FFG LKGRFRILKL + ++ +DNV + C ILHNMLH+FDG+ + +W S G+ A L + + G+ G ++E+E +R+L T + YR ++ ++ WL
Sbjct: 94 GRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV-GATLTTEPEADCGSVGTKDVNDQPQLEIEHTV--RKRQLTTSFAYRKKHKKDIVWL 436
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.350e-66 Identity = 132/341 (38.71%), Postives = 185/341 (54.25%), Query Frame = 1
Query: 145 VCIRFCY-------GFWRACGSGERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVED--GFFFMRRKLITHYTYRVENNEVTWLRS 1140
VC R C G + G G + F D+ SLM+ +TA+ +FH FC FA L+ WI+LP G+ L Y ++G+ GAVGS D TH W S T + GKEG+ T+ +EA DH+GR+L KG G ND ++V+ D +V+ V EP+ S Y++ D+ G G +LI DG HR L+CP K A E SKRLESVRKD+E FG LKGRFR+ K +LF + +D+ + CI+HNML +FDGL E DMDW G G D+ T + ++ ++V +D F R+ L+ H+ + ++EV W R+
Sbjct: 199 VCGRLCVPLELKVLGVLQVLGRG--NCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADS------TTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRA 531
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 225 bits (573), Expect = 3.130e-66 Identity = 114/279 (40.86%), Postives = 168/279 (60.22%), Query Frame = 1
Query: 292 LFHEWIKLPTGDA--LAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENNE 1122
++ E I LPT ++ L + ++ YD +GFTGA+GS DVTH AW P + YTGKEGFPT+ Y+ TVDH+GR + + +G G ND + V +D AV+ +R + Y + + ++DG KG Y++VD H+W+ L+ P+K + +L SKRLESVRKDVE FFG LKGR RIL L + F+ +DNV + CCILHNMLH+FDG+ + +W S G+ + + + ++ NG P+ VE G +R+L T + YR ++ +
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQ---VEAGHAVRKRQLTTSFAYRKKHKK 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5926.13553.1 >prot_H-paniculata_contig5926.13553.1 ID=prot_H-paniculata_contig5926.13553.1|Name=mRNA_H-paniculata_contig5926.13553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp MQYRISLTVCIRFCYGFWRACGSGERDSFDDIDQLSLMNESTAQSAFHIFback to top mRNA from alignment at H-paniculata_contig5926:138..2713+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5926.13553.1 ID=mRNA_H-paniculata_contig5926.13553.1|Name=mRNA_H-paniculata_contig5926.13553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2576bp|location=Sequence derived from alignment at H-paniculata_contig5926:138..2713+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5926:138..2713+ >mRNA_H-paniculata_contig5926.13553.1 ID=mRNA_H-paniculata_contig5926.13553.1|Name=mRNA_H-paniculata_contig5926.13553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig5926:138..2713+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |