mRNA_H-paniculata_contig5926.13553.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5926.13553.1
Unique NamemRNA_H-paniculata_contig5926.13553.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 2.150e-92
Identity = 152/311 (48.87%), Postives = 198/311 (63.67%), Query Frame = 1
Query:  205 FDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
            F DI  +S ++  T  S FH FCK FA +L+ E++ LPTG+ L   M+ YD +GF GAVGSTDVTH  WG  P +   +YTGKEG PT+A++ TVDHSGRVL + +G  G  ND +I+R+DKAV  +R    Y    YKL  +DG +  EKG YL+VD   H+WR+L+ P+K    R +L  SKRLES RKDVE +FG LKGRFRI KL + F +   +DNV + CCILHNMLHSFD       + +WAGS GL +A  +D  T        + +G  E VEVE GF  +R KL+T++ YR E   ++ WL
Sbjct:   97 FADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG--SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 3.140e-91
Identity = 152/311 (48.87%), Postives = 198/311 (63.67%), Query Frame = 1
Query:  205 FDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
            F DI  +S ++  T  S FH FCK FA +L+ E++ LPTG+ L   M+ YD +GF GAVGSTDVTH  WG  P +   +YTGKEG PT+A++ TVDHSGRVL + +G  G  ND +I+R+DKAV  +R    Y    YKL  +DG +  EKG YL+VD   H+WR+L+ P+K    R +L  SKRLES RKDVE +FG LKGRFRI KL + F +   +DNV + CCILHNMLHSFD       + +WAGS GL +A  +D  T        + +G  E VEVE GF  +R KL+T++ YR E   ++ WL
Sbjct:  188 FADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG--SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 5.410e-88
Identity = 146/341 (42.82%), Postives = 206/341 (60.41%), Query Frame = 1
Query:  115 RAMQYRISLTVCIRFCYGFWRACGSGERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNG-RNSNGPPERVEVEDGFFFMRRKLITHYTYRVENNEVTWL 1134
            R +  ++ +  C++              + F DI  +S ++  TA + FH F + FA +++ E I LPTGD     M  YD +GF+GA GSTDVTH  WG  P +    YTGKEG+PT+AY+ TVDH+ RVL +  G  G  ND SI+R+D AV  +RE   Y    + + + DG     KG YL+VD   H+W +L+ P+K    + +LA SKRLESVRKDVE FFG +KGRFRILKL + + +   +DNV + CCILHNMLHS+D     E + +WAG+ GL +AW + + +++L + G + S+   E VEVE GF   R++LI  + YR   N++ WL
Sbjct:  151 RGIPVQLKVLACLQIL---------ARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAW-EHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.090e-81
Identity = 139/328 (42.38%), Postives = 190/328 (57.93%), Query Frame = 1
Query:  190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPP---ERVEVEDGFFF----------MRRKLITHYTYRVENNEVTWL 1134
            G+ + FDD++QLS M++S AQ  FH FC+ FA ++F E I LPTG  L   M  +  +G+TGA GSTDVTH  W   P +    +TGKEGFPT+AY+ TVDH GR L +  G  G  ND +I+R+D  V  +R    Y    YKLR  +G +++ +G +LIVD   H W +L+ P+K     E+ A S+ LESVRKDV        G FRILKL + + +   VDN+ + CCILHNMLH+FDGL + E + DW GS G  DAW  D  T       +    PP   E+ E  +G             ++R+LI  + +R + N++TWL
Sbjct:   45 GKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDV--------GCFRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 364          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.280e-74
Identity = 137/317 (43.22%), Postives = 184/317 (58.04%), Query Frame = 1
Query:  190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENNEVTWLRS 1140
            G  + FDDI QLS ++E T Q  FH F +RFA + F + +K P G  L   ++ Y  VGF G  GS D TH  +   P S  H Y GKEGF T+A+E   DH  R LG++K   G +ND +IV FD+ V+ ++     + + + L  +DG E  E+GLYLIVDG  H+     CP +   T++ELA  K+LESVRKD+E FFG LKGRFRILK+P+L+R    +D +   CC LHNMLHS+DGL L E D +WAG+ G LD W+      +   N       P+    ED F  ++ KL+T+     +   V W RS
Sbjct:  141 GRGNFFDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGGCAGSMDCTHIHYQSAPNSGRHSYVGKEGFATVAFEVVCDHKLRCLGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWVTTPEAESAADNS------PDLHLFEDDFKDLQGKLVTNLAEMKKRGTVGWRRS 444          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 8.520e-74
Identity = 134/318 (42.14%), Postives = 190/318 (59.75%), Query Frame = 1
Query:  190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGD--ALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
            G  + F  I  LS M+  T Q  FH FC+ FA +++ E I LP+ +   L   M  Y+ +GF GA+GSTDVTH  W   P +    YTGKEG PT+ Y+ TV+H+GRVL + +G  G  ND +I+  D+AV  +R  + Y    + +  KDG  +  KG YLIVD   H+WR L+ P+K   +  +L  SKRLESVRKDVE FFG LK RFRILKL + +++   +D V + CCILHNMLH+ DG+   E D++W GS     A LQ+    NL ++   +    ++ +VE     ++RKL T++ YR ++  ++ WL
Sbjct:  136 GRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS-----AELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 2.060e-73
Identity = 134/311 (43.09%), Postives = 179/311 (57.56%), Query Frame = 1
Query:  190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDG-----FFFMRRKLITHYTYR 1107
            G  + F D+ QLSLM+  TA+ +FH FC  F+  L+H+W+ LP G+ L      Y  +G  GAV S D TH +W   P S T+ + GKEG+ TL YEA+ DHSGR+L   KG  G  ND ++V+ D +V  +RE EP+ S  + L D +G      G +LIVDG  HR  SL+CP KE A+  +   SKR ES+RKD+E  FG LKGRFR+ K  +LF     +DN  +  CI+HNMLH FDGL   E D+DWAG  G  D   Q      + T   ++ G     EV+DG     F   R++L+ H  Y+
Sbjct:  121 GRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEAD---QTTGAFPVPTAVVDTAGE----EVDDGDNTEAFKLFRQQLVNHVAYK 424          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 2.630e-70
Identity = 135/346 (39.02%), Postives = 191/346 (55.20%), Query Frame = 1
Query:  190 GERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDA--LAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYR----------------------------SMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENN-EVTWL 1134
            G  + F  I Q+S M+  T Q  FH FC+ FA +++ E I LPT ++  L   MK YD +GFTGAVGS DVTH AW   P +    YTGKEGFPT+AY+ TVDH+GR + + +G  G  ND +IV +D AV+ +   + Y                                + + ++DG     KG YL+VD   H+W+ L+ P+K   +  +L  SKRLESVRKDVE FFG LKGRFRILKL + ++    +DNV + C ILHNMLH+FDG+     + +W  S G+  A L  +   + G+ G        ++E+E      +R+L T + YR ++  ++ WL
Sbjct:   94 GRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV-GATLTTEPEADCGSVGTKDVNDQPQLEIEHTV--RKRQLTTSFAYRKKHKKDIVWL 436          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.350e-66
Identity = 132/341 (38.71%), Postives = 185/341 (54.25%), Query Frame = 1
Query:  145 VCIRFCY-------GFWRACGSGERDSFDDIDQLSLMNESTAQSAFHIFCKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVED--GFFFMRRKLITHYTYRVENNEVTWLRS 1140
            VC R C        G  +  G G  + F D+   SLM+ +TA+ +FH FC  FA  L+  WI+LP G+ L      Y ++G+ GAVGS D TH  W     S T  + GKEG+ T+ +EA  DH+GR+L   KG  G  ND ++V+ D +V+ V   EP+ S  Y++ D+ G      G +LI DG  HR   L+CP K  A   E   SKRLESVRKD+E  FG LKGRFR+ K  +LF +   +D+  +  CI+HNML +FDGL   E DMDW G  G  D+      T  +      ++   ++V  +D   F   R+ L+ H+ +   ++EV W R+
Sbjct:  199 VCGRLCVPLELKVLGVLQVLGRG--NCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADS------TTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRA 531          
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.130e-66
Identity = 114/279 (40.86%), Postives = 168/279 (60.22%), Query Frame = 1
Query:  292 LFHEWIKLPTGDA--LAVTMKAYDAVGFTGAVGSTDVTHNAWGCTPASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*SIVRFDKAVQAVREGEPYRSMAYKLRDKDGVEQVEKGLYLIVDGECHRWRSLVCPAKEAATREELACSKRLESVRKDVEYFFGTLKGRFRILKLPVLFRESA*VDNVVWICCILHNMLHSFDGLKLHEPDMDWAGSGGLLDAWLQDDRTMNLGTNGRNSNGPPERVEVEDGFFFMRRKLITHYTYRVENNE 1122
            ++ E I LPT ++  L + ++ YD +GFTGA+GS DVTH AW   P +    YTGKEGFPT+ Y+ TVDH+GR + + +G  G  ND + V +D AV+ +R  + Y    + + ++DG     KG Y++VD   H+W+ L+ P+K   +  +L  SKRLESVRKDVE FFG LKGR RIL L + F+    +DNV + CCILHNMLH+FDG+     + +W  S G+    + +    +     ++ NG P+   VE G    +R+L T + YR ++ +
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQ---VEAGHAVRKRQLTTSFAYRKKHKK 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5926.13553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY50_9PHAE2.150e-9248.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE3.140e-9148.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE5.410e-8842.82Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE2.090e-8142.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHC3_9PHAE2.280e-7443.22DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE8.520e-7442.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE2.060e-7343.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.630e-7039.02DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L0H2_9PHAE1.350e-6638.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI3.130e-6640.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5926contigH-paniculata_contig5926:138..2713 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score92.8
Seed ortholog evalue1.4e-16
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1554
Cds size429
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5926.13553.1prot_H-paniculata_contig5926.13553.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5926 258..1100 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930649.7552347-UTR-H-paniculata_contig5926:137..2571622930649.7552347-UTR-H-paniculata_contig5926:137..257Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5926 138..257 +
1691481389.2264876-UTR-H-paniculata_contig5926:137..2571691481389.2264876-UTR-H-paniculata_contig5926:137..257Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5926 138..257 +
1622930649.800392-UTR-H-paniculata_contig5926:1100..12441622930649.800392-UTR-H-paniculata_contig5926:1100..1244Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5926 1101..1244 +
1691481389.2704737-UTR-H-paniculata_contig5926:1100..12441691481389.2704737-UTR-H-paniculata_contig5926:1100..1244Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5926 1101..1244 +
1622930649.8129506-UTR-H-paniculata_contig5926:1852..27131622930649.8129506-UTR-H-paniculata_contig5926:1852..2713Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5926 1853..2713 +
1691481389.2807958-UTR-H-paniculata_contig5926:1852..27131691481389.2807958-UTR-H-paniculata_contig5926:1852..2713Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5926 1853..2713 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930649.769108-CDS-H-paniculata_contig5926:257..3041622930649.769108-CDS-H-paniculata_contig5926:257..304Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5926 258..304 +
1691481389.243671-CDS-H-paniculata_contig5926:257..3041691481389.243671-CDS-H-paniculata_contig5926:257..304Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5926 258..304 +
1622930649.7840588-CDS-H-paniculata_contig5926:718..11001622930649.7840588-CDS-H-paniculata_contig5926:718..1100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5926 719..1100 +
1691481389.2543135-CDS-H-paniculata_contig5926:718..11001691481389.2543135-CDS-H-paniculata_contig5926:718..1100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5926 719..1100 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5926.13553.1

>prot_H-paniculata_contig5926.13553.1 ID=prot_H-paniculata_contig5926.13553.1|Name=mRNA_H-paniculata_contig5926.13553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MQYRISLTVCIRFCYGFWRACGSGERDSFDDIDQLSLMNESTAQSAFHIF
CKRFAEDLFHEWIKLPTGDALAVTMKAYDAVGFTGAVGSTDVTHNAWGCT
PASHTHLYTGKEGFPTLAYEATVDHSGRVLGMAKGMAGVVND*
back to top

mRNA from alignment at H-paniculata_contig5926:138..2713+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5926.13553.1 ID=mRNA_H-paniculata_contig5926.13553.1|Name=mRNA_H-paniculata_contig5926.13553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2576bp|location=Sequence derived from alignment at H-paniculata_contig5926:138..2713+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGCAAGGTGTGCTGCGCACACCTGGGGAGAATCGTTGTTTCGTCATTTG TTTTGCTGGGCAAAGAATATCCAGACCACCCAACTGACGCCGCGAGCTTG TACCTTAAGCATGACGCGCGATGCAATACAGGATCTCCTTAACCGTCTGT ATTCGATTTTGCTATGGGTGCGTCTGATACTTTTGTTTGTTTATTGGTAT GTTCGATGGGTTACCCTGTTCAATTTCCCTGTTGTTGTCCTTCTCTGACG AGGTTACATTGTTAGAGTGACAATGAAATTATGCACACTGGTCACACATC GCGAAAGAAAATGCCACAATGCCACCTGCGGTGGATTCTCTTCCGTAGGG GTGTCTTAGGTCCATTGCAATAGTGCCACATTGCGTTGGTAAGGGCGATT GATATTCGATAAGCCGAGGTGCGTCATTGCAAGTATTTTTTTCAGCGAGG CCGTCGCACTGGGAACACGAGCGTCATCAATCCATTTTCTCCTTGATAAT ATTTCGCTATCCCAGCCGTCGTCAGTACGGCCAAGTGTTTCATGCAATTC CGTTACCCCTTCCGTCGCGGCTGTATCACAGATTCTGGCGAGCTTGCGGA TCTGGGGAAAGGGATAGCTTCGATGATATCGACCAGCTCTCCTTGATGAA CGAGTCGACTGCCCAAAGTGCGTTTCACATATTTTGCAAGCGTTTCGCTG AAGATCTTTTTCATGAGTGGATTAAACTCCCTACCGGGGATGCCCTCGCA GTCACGATGAAGGCGTACGATGCGGTGGGCTTCACCGGGGCAGTAGGCTC GACTGATGTCACTCACAATGCATGGGGTTGCACCCCGGCATCACATACCC ATCTCTACACCGGCAAGGAAGGATTCCCGACTCTCGCATACGAGGCGACG GTAGACCACTCGGGGCGGGTATTGGGGATGGCGAAGGGAATGGCCGGAGT AGTGAACGATTAATCCATCGTTCGTTTCGACAAGGCAGTTCAAGCGGTCA GGGAGGGTGAGCCGTACAGGTCGATGGCTTACAAGCTCCGCGATAAGGAT GGCGTGGAACAGGTGGAGAAGGGTCTTTACCTCATCGTCGACGGAGAATG TCACCGGGTAAGTCACCTGCTGTTGTTTGATGGTCATTGCTGCTGCACCA CCCTACGGAAATGCGTTGTATAGTTTTATTTTGTGCGGCAACAATTTCTT CGTTTCTGACAAGCATACCCCATTTAGTGTTTGCATGAACCACACCCCAC GTACGATGTACGACGTTGTTGATCCCAACGTCAACGGCCACCCTAGGTCC CACTTTGTGAGCCGCAACTCTAGACTCGCCGGACATTAGTTTGAAATATT ACCACCAGACGAGGTGCAAGCTATGAGACAGCAAGCTTCCTTGACATAGG TGGCAGCTACGCGAAATCCGTAGGTCGTACCACGTGGTGTATCTTGTTTA AAGTGAAGACTATGCCACCGTTGACAAGGACTTCGCAACGATGATAACGC CCTTCTTTCTCTTTTTTTATGGTCGGTTTCAACTGTCGGTGTTGTTGATG TCGTCTTCAGCTTCAATTTCCTCTGTACCGCTGAGTGATCACTGATGAAG GCTGAGATAAATCGTACGAGCCGGGCATTTCAATGTCTGACACCGTTGGC CAGACGCTGCATAAGAACGACGTGTATCGACACTACTGTATTCTCGTTTC CCCTCTTATTTGCAGTGGAGGAGTCTAGTGTGCCCGGCAAAAGAAGCTGC AACTCGAGAGGAATTAGCGTGTAGTAAACGTCTCGAGAGCGTTCGAAAGG ACGTGGAATACTTCTTCGGCACTCTAAAGGGCCGCTTCAGAATTTTGAAG CTGCCCGTTCTTTTCAGGGAGTCCGCTTAGGTAGACAACGTGGTTTGGAT ATGCTGCATCCTTCACAACATGCTGCACTCGTTCGACGGACTGAAGTTGC ACGAGCCGGATATGGACTGGGCCGGGTCGGGTGGTCTCCTTGACGCATGG CTTCAAGACGATCGCACAATGAACTTGGGCACGAACGGTCGCAATTCGAA CGGGCCGCCAGAGCGCGTCGAAGTCGAGGACGGGTTTTTCTTCATGAGAA GGAAGCTAATCACGCACTACACATACAGGGTGGAAAACAACGAAGTGACT TGGCTGCGGTCGTAATCTGGTCAGAAATGATTGGAGAGTGTAGATTGGAC ATAGTGCTGCATGGATTTTCATGTGTCGCGGCGATTTATGTTGTGAGATT TGACAGCTTGGTTGGCAGGATGAGCTGTAGCACGCGATATTATTGTCGGC CATCGTGAATAAATAGCAGATGGGCACGGAATGGCCGCCACAGCATTTTG CTAGGCATGATATCGCCCGCTCTGACCTTCCATGACATGATGATTCATTT TGCTGGGATGCTGTTTGTTCTAAAATTCAAGTTTTACTCCCTGTAAGCAG TAGAGGCCTGTTGAGACGACTGTGTGTCCAAAAAAAAGGTCCATGAAATA TTCCACACATACATCGAGCGCTACTGTACAGCTAATGATTGACAGAACCT GTGTCAGTTAGCGCACGACATGGGTG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5926:138..2713+

>mRNA_H-paniculata_contig5926.13553.1 ID=mRNA_H-paniculata_contig5926.13553.1|Name=mRNA_H-paniculata_contig5926.13553.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig5926:138..2713+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAATACAGGATCTCCTTAACCGTCTGTATTCGATTTTGCTATGGATG
CAATACAGGATCTCCTTAACCGTCTGTATTCGATTTTGCTATGGATTCTG
GCGAGCTTGCGGATCTGGGGAAAGGGATAGCTTCGATGATATCGACCAGC
TCTCCTTGATGAACGAGTCGACTGCCCAAAGTGCGTTTCACATATTTTGC
AAGCGTTTCGCTGAAGATCTTTTTCATGAGTGGATTAAACTCCCTACCGG
GGATGCCCTCGCAGTCACGATGAAGGCGTACGATGCGGTGGGCTTCACCG
GGGCAGTAGGCTCGACTGATGTCACTCACAATGCATGGGGTTGCACCCCG
GCATCACATACCCATCTCTACACCGGCAAGGAAGGATTCCCGACTCTCGC
ATACGAGGCGACGGTAGACCACTCGGGGCGGGTATTGGGGATGGCGAAGG
GAATGGCCGGAGTAGTGAACGATTAAATTCTGGCGAGCTTGCGGATCTGG
GGAAAGGGATAGCTTCGATGATATCGACCAGCTCTCCTTGATGAACGAGT
CGACTGCCCAAAGTGCGTTTCACATATTTTGCAAGCGTTTCGCTGAAGAT
CTTTTTCATGAGTGGATTAAACTCCCTACCGGGGATGCCCTCGCAGTCAC
GATGAAGGCGTACGATGCGGTGGGCTTCACCGGGGCAGTAGGCTCGACTG
ATGTCACTCACAATGCATGGGGTTGCACCCCGGCATCACATACCCATCTC
TACACCGGCAAGGAAGGATTCCCGACTCTCGCATACGAGGCGACGGTAGA
CCACTCGGGGCGGGTATTGGGGATGGCGAAGGGAATGGCCGGAGTAGTGA
ACGATTAA
back to top