mRNA_H-paniculata_contig587.13482.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: D8LIB7_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB7_ECTSI) HSP 1 Score: 335 bits (859), Expect = 5.470e-108 Identity = 163/199 (81.91%), Postives = 177/199 (88.94%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 597
L S MFLHAGVVHFLFNMLGFLQVG MVERVFGWWRVA IYLV+G+FGTIVSAIFVP QVMVGASGAIFGVFGALWADLWQNWSV ++C TVL LTA+N++LGLMPFLDNFAH GG++MG FMGLGLLVQKRED G RL KCYQ +LQLV+AVAVPTL+ILGLSLLYGRSDP EWCGWCE ISCVEFPPG++P
Sbjct: 478 LISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVASIYLVSGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLNKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSP 676
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A6H5JTL7_9PHAE (Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL7_9PHAE) HSP 1 Score: 331 bits (849), Expect = 7.220e-107 Identity = 163/201 (81.09%), Postives = 178/201 (88.56%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQ--TLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 597
L S MFLHAGVVHFLFNMLGFLQVG MVERVFGWWRVA IYLVAG+FGTIVSAIFVP QVMVGASGAIFGVFGALWADLWQNWSV ++C TVL LTA+N++LGLMP+LDNFAH GG++MG FMGLGLLVQKRED G RL+ KCYQ +LQLV+AVAVPTL+ILGLSLLYGRSDP EWCGWCE ISCVEFPPG++P
Sbjct: 476 LISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGLMPYLDNFAHCGGMLMGLFMGLGLLVQKREDDRGYRLDKKCYQARVSLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSP 676
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A835YQV6_9STRA (Rhomboid-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV6_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.620e-64 Identity = 102/199 (51.26%), Postives = 141/199 (70.85%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDP--NEWCGWCEKISCVEFPPGN 591
L SA+FLHAG++HF+FNML +G ++ERVFG ++V +I++V+G+F T VSAIF+P QVMVGASGAI G+ G +WADL QNWS+ ++ VL +TA+N++LGLMP+LDNFAH+GG++MGFF L LLV + E + G + Q+ LQ + V LL+ L +L+G + NEWC WC +SCVEFP G+
Sbjct: 48 LLSAVFLHAGIIHFIFNMLALFSIGAVLERVFGGFKVLVIFIVSGVFSTAVSAIFLPYQVMVGASGAILGLLGGVWADLLQNWSLKQRPWVSIIVLFTITAVNLLLGLMPYLDNFAHMGGLVMGFFCSLPLLVMRAETAHGKLVAVSVRQRILQALGLVTSIALLVAALVVLFGSEEDSVNEWCSWCSNLSCVEFPKGD 246
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A7S3UQB1_HETAK (Rhomboid-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQB1_HETAK) HSP 1 Score: 201 bits (512), Expect = 4.090e-59 Identity = 105/199 (52.76%), Postives = 131/199 (65.83%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 597
+F+ MFLH+G+VH +FNM G + +ER GW R+ +IYL++GIFGT+ SAIFVP Q+MVGASGAIFG+ GA WADL QNWSV + L+ L FLTA N V G MP+LDNFAH GG++ G GL LL Q R D FG KCYQ L ++A+ LL+ + LY +D C C K+SCVEFPPG P
Sbjct: 230 IFTPMFLHSGLVHLVFNMTGLWYLVREMERTHGWQRLTVIYLLSGIFGTLCSAIFVPYQLMVGASGAIFGMVGARWADLIQNWSVLHKPWVELSFLFFLTASNYVFGFMPYLDNFAHTGGMVFGVLCGLVLLAQTRVDHFGFARGRKCYQTALATLAAMGTAALLMAATAWLYSSADVYAICPRCSKLSCVEFPPGAGP 428
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A7S2RTG0_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTG0_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.040e-55 Identity = 92/189 (48.68%), Postives = 128/189 (67.72%), Query Frame = 1
Query: 34 VHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLF-LTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 597
+H+LFNM+ VG +ER FG + I+LV+G G I SAIF PL + VGASG +FG+FGA W+DL N+S+Y + + V LF +T LN+++GL+P++DNFAHIGG++ G G G+LV R +G E K YQ LQ++SAV +P L+++ L +LY +P EWC WC +SCV+FPPG NP
Sbjct: 1 IHWLFNMIALTAVGFPLERQFGSGALLYIFLVSGFMGNIFSAIFSPLTIGVGASGGVFGIFGAAWSDLILNYSLYKGRVCRIFVQLFCVTFLNLIVGLIPYVDNFAHIGGLLTGMIAGFGVLVANRYSRYGELKERKRYQLVLQIMSAVLIPVLIVVCLFVLY-LGEPGEWCSWCHYMSCVQFPPGPNP 188
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A2R5GUE1_9STRA (Rhomboid-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUE1_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.730e-55 Identity = 96/200 (48.00%), Postives = 132/200 (66.00%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYS-EKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPGNNP 597
L + +FLHAG++H+LFNM Q+G +E FG ALI L+ G G + SAI P+ V VGASGAIF +FG+ W++L NWS+Y + C ++T L+ TA+N++LGLMPFLDNFAHI G + G +G G+LV R +G E K YQ LQ +S + P L+++ L +LY D +EWC WC +SCV FPPG++P
Sbjct: 129 LIAPIFLHAGILHYLFNMFALWQIGFPLENQFGSLAAALIILLGGFQGVVWSAILSPVTVGVGASGAIFALFGSAWSELILNWSLYKGQHCISITQLVLATAVNLMLGLMPFLDNFAHIAGFVTGILVGFGVLVSNRFTRWGELKERKRYQVVLQSLSVLITPLLVVVSLLVLYLGVDADEWCTWCRYLSCVPFPPGDSP 328
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A2R5H0C6_9STRA (Rhomboid-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H0C6_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.550e-50 Identity = 90/197 (45.69%), Postives = 128/197 (64.97%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKC-WALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFPPG 588
+F+ + LHAG VH LFN+L +G +ER FG ++++I++ +GIFG ++SAIF+P Q+ VGASGA+FG+FGA W+DL NWS+Y W L L+ T N+ LGL+P+LDNFAH GG G F+G LLVQKR + +G + K YQ +Q ++ V +P L ++ +LY + + C WC ISCV P G
Sbjct: 191 IFTPIILHAGFVHLLFNLLALYNIGFSMERDFGSLKISIIFIGSGIFGVLLSAIFLPQQLSVGASGALFGLFGAAWSDLLHNWSLYGNSAKWVLLQLVLATIFNLGLGLLPYLDNFAHFGGFCCGLFLGFTLLVQKRYNIWGDLQQRKTYQVVVQSLALVILPILFVVLTLVLYLDVNVADSCDWCSYISCVPLPIG 387
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A251UCK3_HELAN (RHOMBOID-like protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UCK3_HELAN) HSP 1 Score: 162 bits (411), Expect = 2.410e-45 Identity = 82/202 (40.59%), Postives = 131/202 (64.85%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKRED------SFGSRLET--KCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCVEFP 582
+F+ M+LHAGV H NML L VG +E+ FG+ R+ L+Y+V+GI G+++S++F+ + VGASGA+FG+ GA+ ++L NW++Y+ K AL +L+ + +N+++G++P +DNFAHIGG I GFF+G LL + + D +G ++ K YQ L ++S +A+ + G LY + D N +C WC +SCV P
Sbjct: 115 IFTCMWLHAGVFHIFTNMLSLLSVGIRLEQEFGFARIGLLYIVSGIGGSLLSSLFIRKTISVGASGALFGLLGAMLSELLTNWAIYANKVAALVMLVLMILMNLLVGILPHVDNFAHIGGFITGFFLGFILLARPQLDWIVPPGYYGHPMKPQYKLYQYVLIVLSVIALIVIFTTGFVFLYRKIDGNNYCSWCHYLSCVPTP 316
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: V4KD79_EUTSA (RHOMBOID-like protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KD79_EUTSA) HSP 1 Score: 160 bits (404), Expect = 9.080e-45 Identity = 85/197 (43.15%), Postives = 129/197 (65.48%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQKREDSFGSRLETK-------CYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISC 570
L S M+LHAG++H L NML + +G +E+ FG+ RV LIYL++G G+I+S++F+ + VGASGA+FG+ GA+ ++L NW++Y+ K AL LLF+ A+N+ LGL+P +DNFAHIGG + GF +G LL++ + SR T YQ L +V+AV + L +GL +L+ + N+ C WC ++SC
Sbjct: 117 LLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGFGGSILSSLFLQESISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLGLGLLPRVDNFAHIGGFLTGFCLGFVLLLRPQYGWEASRTSTSRTKRKHSMYQYVLFVVAAVLLVVGLTVGLVMLFKGENGNKHCKWCHRLSC 313
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Match: A0A0A7E6W5_9LILI (RHOMBOID-like protein (Fragment) n=1 Tax=Lilium brownii TaxID=82312 RepID=A0A0A7E6W5_9LILI) HSP 1 Score: 160 bits (406), Expect = 1.010e-44 Identity = 83/202 (41.09%), Postives = 129/202 (63.86%), Query Frame = 1
Query: 1 LFSAMFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIFVPLQVMVGASGAIFGVFGALWADLWQNWSVYSEKCWALTVLLFLTALNVVLGLMPFLDNFAHIGGIIMGFFMGLGLLVQ-------KREDSFGSRL----ETKCYQQTLQLVSAVAVPTLLILGLSLLYGRSDPNEWCGWCEKISCV 573
LF+ M+LHAGV H L NML + +G +E+ FG+ R+ L+YL++G G+++SA+FV + VGASGA+FG+ GA+ ++L NW++YS K AL L+ +T +N+ +G++P +DNFAHIGG + GF +G L++ +R G R + K YQ L L++A+ + T +GL +L+ PN+ C WC +SCV
Sbjct: 97 LFTCMWLHAGVFHLLANMLSLIFIGIRLEQEFGFVRIGLLYLISGFGGSLLSALFVQTSISVGASGALFGLLGAMLSELITNWTIYSNKLAALLTLVIITVINLAVGILPHVDNFAHIGGFVSGFCLGFVFLIRPQYRWVSQRNVPLGYRTGPVRKHKVYQYILWLIAAIVLITGFTVGLIMLFRGYSPNDHCSWCHYMSCV 298 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig587.13482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig587.13482.1 >prot_H-paniculata_contig587.13482.1 ID=prot_H-paniculata_contig587.13482.1|Name=mRNA_H-paniculata_contig587.13482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MFLHAGVVHFLFNMLGFLQVGTMVERVFGWWRVALIYLVAGIFGTIVSAIback to top mRNA from alignment at H-paniculata_contig587:32172..34675- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig587.13482.1 ID=mRNA_H-paniculata_contig587.13482.1|Name=mRNA_H-paniculata_contig587.13482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2504bp|location=Sequence derived from alignment at H-paniculata_contig587:32172..34675- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig587:32172..34675- >mRNA_H-paniculata_contig587.13482.1 ID=mRNA_H-paniculata_contig587.13482.1|Name=mRNA_H-paniculata_contig587.13482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig587:32172..34675- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |