prot_H-paniculata_contig5812.13414.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 8.520e-19 Identity = 48/94 (51.06%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 6 QGPCHDCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNWSGTIDN 99
Q P DCGGT+AP+CRLQ I MV AIA E +L+ QLD T F A + E V+V+M PGYE + + LV + KSL L QSP +W TID+
Sbjct: 374 QVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDS 467
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 3.390e-12 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 6 QGPCHDCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENG 72
Q P DCGGTYAP+CRLQ I M+ IA ++NLE Q+D +T F A + E V+V+ PG+E D++G
Sbjct: 782 QVPGLDCGGTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDG 848
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A6A3B769_HIBSY (Indole-3-acetic acid-amido synthetase GH3.17 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B769_HIBSY) HSP 1 Score: 67.8 bits (164), Expect = 2.620e-10 Identity = 30/83 (36.14%), Postives = 50/83 (60.24%), Query Frame = 0
Query: 11 DCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNW 93
D T++ + + ++VL +A E W +D N F N + E++++K +PG+E+V +G PLV + K+LY LRQ+P NW
Sbjct: 771 DFTDTFSLVVKFHTFNVVLTLAVTNGWELWHVDINNAFLNGDLGEDIFMKQLPGFEQVVADGSPLVYKLQKALYGLRQAPRNW 853
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A6A3AGV4_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AGV4_HIBSY) HSP 1 Score: 67.0 bits (162), Expect = 4.810e-10 Identity = 28/86 (32.56%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 15 TYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNWSGTIDNI 100
T++P+ + ++++L++A N E +D N F N ++E V++K PG+E+ +G PLV + K+LY L+Q+P NW + ++
Sbjct: 1056 TFSPVVKFTTLNVILSVAVANNWELRHVDINNAFLNGDLKEAVFMKQPPGFEQTTADGEPLVCQLQKALYGLKQTPRNWYAKLKDV 1141
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A075AZK3_ROZAC (Reverse transcriptase, RNA-dependent DNA polymerase domain-containing protein (Fragment) n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AZK3_ROZAC) HSP 1 Score: 63.9 bits (154), Expect = 1.720e-9 Identity = 31/88 (35.23%), Postives = 57/88 (64.77%), Query Frame = 0
Query: 11 DCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNWSGTID 98
D TY+P+CR+Q I +++AIA E+N++ Q+D +T + N+ + +E+Y++ G++ E+G V + K+LY L+Q+ W+ ID
Sbjct: 74 DFEKTYSPVCRIQSIRILMAIAVEFNMKIHQMDVDTAYLNSKIDKEIYMRFPEGFKM--EHGGGKVWKLKKALYGLKQAGRQWNLHID 159
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A699QJX9_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699QJX9_TANCI) HSP 1 Score: 61.2 bits (147), Expect = 3.500e-9 Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0
Query: 11 DCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNWSGTI 97
D ++AP+ R++ IH+ +A AT N+ +Q+D T F N ++EEVYV G+ ++D + + K+LY L+Q+P W T+
Sbjct: 38 DFEESFAPVARIEAIHIFIANATSRNINVYQMDVKTAFLNGDLKEEVYVSQPEGFVDLDHSTHVYCLK--KALYGLKQAPRAWYDTL 122
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A699UAV1_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699UAV1_TANCI) HSP 1 Score: 61.2 bits (147), Expect = 5.620e-9 Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0
Query: 11 DCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNW 93
D ++AP+ RL+ IH+ LA A N+ +Q+D T F N +REEVYV G+ +D++ V + K+LY L+Q+P W
Sbjct: 38 DFEESFAPVARLEAIHIFLAYAAHKNMVVYQMDLKTAFFNGNLREEVYVSQPDGF--MDQDNPNHVYKLKKALYRLKQAPRAW 118
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A6A3A122_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A122_HIBSY) HSP 1 Score: 63.5 bits (153), Expect = 7.680e-9 Identity = 28/84 (33.33%), Postives = 51/84 (60.71%), Query Frame = 0
Query: 10 HDCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNW 93
+D ++P+ + ++VLA+A + E +D N F N + + V+++ PG+E+V ++G PLV + ++LY LRQ+P NW
Sbjct: 979 YDFTDMFSPVLKFSTFNVVLALAVSNDWELRHVDVNNAFLNGDLDDVVFMEQPPGFEQVADDGTPLVCKLQRALYGLRQAPRNW 1062
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: A0A6G1DYR6_9ORYZ (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1DYR6_9ORYZ) HSP 1 Score: 60.8 bits (146), Expect = 1.290e-8 Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 0
Query: 11 DCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNWSGTID 98
D +AP+ R++ +HM+LA+A +D + F N ++EEVYV +PG+ D L R K+LY LRQ+P W+ +D
Sbjct: 61 DFDEVFAPVARMESMHMLLALAAHERWTVHHMDVKSAFLNGDLKEEVYVSQLPGFVVNDSEQKVLCLR--KALYGLRQAPRAWNAKLD 146
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Match: Q9SLF0_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SLF0_ARATH) HSP 1 Score: 62.8 bits (151), Expect = 1.420e-8 Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 0
Query: 2 LESEQGPCHDCGGTYAPLCRLQRIHMVLAIATEYNLESWQLDYNTGFRNAGVREEVYVKMVPGYEEVDENGVPLVTRNLKSLYVLRQSPSNW 93
L ++Q D G T+AP+ ++ + + L +A + N E Q+D + F + +REEVY+K+ PG+E N V R K+LY L+Q+P W
Sbjct: 891 LGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKV---CRLRKALYGLKQAPRCW 979 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5812.13414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5812.13414.1 ID=prot_H-paniculata_contig5812.13414.1|Name=mRNA_H-paniculata_contig5812.13414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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