prot_H-paniculata_contig578.13370.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig578.13370.1
Unique Nameprot_H-paniculata_contig578.13370.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length811
Homology
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 4.400e-102
Identity = 376/728 (51.65%), Postives = 450/728 (61.81%), Query Frame = 0
Query:   69 LLAQVKSNLKDPDPNLCRGLAQMADLRPKVFREPELLEAVCELLTSKGGKTAIQASE-QEPPREAQAAACSILTNALRALPDWPLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTAWEPPPAPRPTSESAAHKVAGNVAAAGALATAAPPQNAPNVNNRRPAPSPSSATPPAAKRPRLPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEEFVEEGGHVGAVLPVDSAGAGAERAXXXXXXXXXXXXXXXXXXARKR-------------EEEARTFSGFERITLQGEDDGLPPVFDRFSRNRSDAEEVIVSALRERFGMERRESV---RTQRVRGWDDSEKRTEWQVVEAVKDLSTLSSVRAFAAPHISRWLNSPAFKQLSSELLGVLVRRVDPDAGGEDDALVVNKILTVDTTKPSLKPLYRTALQNLLRSHPGFSPMVLESSVNGLGSPKGG--GGDGGEIAGADSXXXXEGTAMTQASVKERMKTVLSCLFDALGQSRATTEVARVLCTLCARTAAASTAAAAGEGAPWPGSAGIEGAS---------GARRGTLAPAAAPKALLPMLESLPHRSTEVLGLAVEMLEIGQAAADALVAIGSETEGGGGGERGAGIFESVDAAGRDLSYLRGLSGPSVRRWAAILAATVREVVLWRARRDCMTVRSSARQRAVA 768
            L+  V +N+++PD +LC  L +MA+LRPKVFREPELLEAV E+LT KG KTAIQ+S  QE P  AQAAAC++LT AL+ALP+WP+ALLD+YMHDALG RQW SHS C+  VDN+RTAW PP                            PPQ  P    RR +P  SS              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXX                  EEA+TFSGFE++ L+GEDD +P V DRFSR    AEE I+ AL ERFG    + +   R +R +GW  SEK+TEWQVV A  +LSTL++VRAF APH++RWLNSPAFK ++        R + P+   + D  VV+ IL++DT +PSLKP+YR+ALQ+ L +  G S   + +   G+ +P  G  GGDG       SXXXX      +    ER K VL+CLF+ALG  RAT EVARVLCTL A   AA T AA              G S                    AP ALLP+L SLP R  +V+GLA+E+LE GQAAAD L + G+      G +  A +F S +++GRDLSYL  LSGP++RRWAA LAATVRE+++WRAR DC   R +  +R  A
Sbjct:   16 LVVAVPANIQNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGGQEAPCVAQAAACAMLTAALKALPEWPIALLDIYMHDALGGRQWASHSACKPFVDNVRTAWAPP---------------------------TPPQAKPV---RRGSPVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEEAKTFSGFEKLDLEGEDDRIPAVSDRFSRKV--AEEAILLALHERFGSSSGDGLERERERRFKGWSHSEKKTEWQVVLAATELSTLTAVRAFVAPHLNRWLNSPAFKDMA--------RPLSPE-NQQGDGTVVDAILSIDTARPSLKPIYRSALQSSLVAIGGGS---VATKSGGVEAPDPGISGGDGA------SXXXXXXXXXXKVEATERTKIVLACLFEALGAKRATREVARVLCTLSA--GAAETMAAXXXXXXXXXXXXTPGVSPXXXXXXXXXXXXXXXXXXXAPPALLPVLGSLPERCKDVVGLALEVLETGQAAADMLASQGAAAAAAAGADSRAVVFSSANSSGRDLSYLAALSGPALRRWAATLAATVREMIVWRARNDCAAAREAGNRRKTA 691          
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.600e-47
Identity = 100/171 (58.48%), Postives = 126/171 (73.68%), Query Frame = 0
Query:   24 GRGGF-RVDEILRLCPESMGTGTTNYDAAGDEDRAMKAAAVAEIKALLAQVKSNLKDPDPNLCRGLAQMADLRPKVFREPELLEAVCELLTSKGGKTAIQASE-QEPPREAQAAACSILTNALRALPDWPLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTAWEPPPAPR 192
            GRG   RV +IL +CP +MG+G        ++   ++  AV  IK LL QVK N+K+PD +LC  L +MA+LRPKVFREPELLE+V E+LT KG KTAIQ+S  +E P  AQAAAC++LT AL+ALP+WP+ALLD+YMHDALG RQW SHS C+  VDN+RTAW PP  P+
Sbjct:   11 GRGSENRVQDILSMCPATMGSGLQAALNETEDSGVLRTKAVDTIKGLLQQVKENIKNPDRSLCSDLQRMAELRPKVFREPELLESVGEVLTGKGAKTAIQSSGGREAPCVAQAAACAMLTAALKALPEWPIALLDIYMHDALGGRQWASHSACKPFVDNVRTAWAPPTPPQ 181          
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Match: A0A151ZJI7_9MYCE (Integrator complex subunit 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZJI7_9MYCE)

HSP 1 Score: 62.4 bits (150), Expect = 4.140e-6
Identity = 35/110 (31.82%), Postives = 53/110 (48.18%), Query Frame = 0
Query:   75 SNLKDPDPNLCRGLAQMADLRPKVFREPELLEAVCELLTSKGGKTAIQASEQEPPREAQAAACSILTNALRALPDWPLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTA 184
            +N  +PD N    L  +A   P +F   ELLE +  LL     K  I    ++        AC++L +    + DWPL  + VY+ DA+ +RQWV    C+  V N+ T+
Sbjct:  139 ANQNEPDKNAYSSLLVLAKRSPDLFSSGELLEPLLSLLR----KDPIHVQPKKN-NLLSLLACNLLMSGYENVSDWPLPFMQVYIEDAIADRQWVDDPNCKYFVSNIITS 243          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4I3_9PHAE4.400e-10251.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPC4_ECTSI1.600e-4758.48Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A151ZJI7_9MYCE4.140e-631.82Integrator complex subunit 1 n=1 Tax=Tieghemosteli... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038902Integrator complex subunit 1PANTHERPTHR21224UNCHARACTERIZEDcoord: 54..546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig578contigH-paniculata_contig578:13394..24199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig578.13370.1mRNA_H-paniculata_contig578.13370.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig578 13394..24226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig578.13370.1 ID=prot_H-paniculata_contig578.13370.1|Name=mRNA_H-paniculata_contig578.13370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=811bp
MASRQPRWPNQEIPGRGQIRIRVGRGGFRVDEILRLCPESMGTGTTNYDA
AGDEDRAMKAAAVAEIKALLAQVKSNLKDPDPNLCRGLAQMADLRPKVFR
EPELLEAVCELLTSKGGKTAIQASEQEPPREAQAAACSILTNALRALPDW
PLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTAWEPPPAPRPTSESAAH
KVAGNVAAAGALATAAPPQNAPNVNNRRPAPSPSSATPPAAKRPRLPTAA
ADEGKATVAAAAATTGAMEGGSEESSSGEEEVVGEGGAVGDVVVPVVIKR
GASVISLVTGAGAGGGGGGDDSSSSDGEEFVEEGGHVGAVLPVDSAGAGA
ERAAAATAAVVAQATAVAQALARKREEEARTFSGFERITLQGEDDGLPPV
FDRFSRNRSDAEEVIVSALRERFGMERRESVRTQRVRGWDDSEKRTEWQV
VEAVKDLSTLSSVRAFAAPHISRWLNSPAFKQLSSELLGVLVRRVDPDAG
GEDDALVVNKILTVDTTKPSLKPLYRTALQNLLRSHPGFSPMVLESSVNG
LGSPKGGGGDGGEIAGADSGGTSEGTAMTQASVKERMKTVLSCLFDALGQ
SRATTEVARVLCTLCARTAAASTAAAAGEGAPWPGSAGIEGASGARRGTL
APAAAPKALLPMLESLPHRSTEVLGLAVEMLEIGQAAADALVAIGSETEG
GGGGERGAGIFESVDAAGRDLSYLRGLSGPSVRRWAAILAATVREVVLWR
ARRDCMTVRSSARQRAVAVAAEAQAASTGAIQRKRKAAGGAPGRGGGAGG
RGPTGNVWTMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038902INTS1