|
|
Homology
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE) HSP 1 Score: 357 bits (917), Expect = 5.500e-102 Identity = 376/728 (51.65%), Postives = 450/728 (61.81%), Query Frame = 1
Query: 232 LLAQVKSNLKDPDPNLCRGLAQMADLRPKVFREPELLEAVCELLTSKGGKTAIQASE-QEPPREAQAAACSILTNALRALPDWPLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTAWEPPPAPRPTSESAAHKVAGNVAAAGALATAAPPQNAPNVNNRRPAPSPSSATPPAAKRPRLPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEEFVEEGGHVGAVLPVDSAGAGAERAXXXXXXXXXXXXXXXXXXARKR-------------EEEARTFSGFERITLQGEDDGLPPVFDRFSRNRSDAEEVIVSALRERFGMERRESV---RTQRVRGWDDSEKRTEWQVVEAVKDLSTLSSVRAFAAPHISRWLNSPAFKQLSSELLGVLVRRVDPDAGGEDDALVVNKILTVDTTKPSLKPLYRTALQNLLRSHPGFSPMVLESSVNGLGSPKGG--GGDGGEIAGADSXXXXEGTAMTQASVKERMKTVLSCLFDALGQSRATTEVARVLCTLCARTAAASTAAAAGEGAPWPGSAGIEGAS---------GARRGTLAPAAAPKALLPMLESLPHRSTEVLGLAVEMLEIGQAAADALVAIGSETEGGGGGERGAGIFESVDAAGRDLSYLRGLSGPSVRRWAAILAATVREVVLWRARRDCMTVRSSARQRAVA 2331
L+ V +N+++PD +LC L +MA+LRPKVFREPELLEAV E+LT KG KTAIQ+S QE P AQAAAC++LT AL+ALP+WP+ALLD+YMHDALG RQW SHS C+ VDN+RTAW PP PPQ P RR +P SS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX EEA+TFSGFE++ L+GEDD +P V DRFSR AEE I+ AL ERFG + + R +R +GW SEK+TEWQVV A +LSTL++VRAF APH++RWLNSPAFK ++ R + P+ + D VV+ IL++DT +PSLKP+YR+ALQ+ L + G S + + G+ +P G GGDG SXXXX + ER K VL+CLF+ALG RAT EVARVLCTL A AA T AA G S AP ALLP+L SLP R +V+GLA+E+LE GQAAAD L + G+ G + A +F S +++GRDLSYL LSGP++RRWAA LAATVRE+++WRAR DC R + +R A
Sbjct: 16 LVVAVPANIQNPDRSLCSDLQRMAELRPKVFREPELLEAVGEVLTGKGAKTAIQSSGGQEAPCVAQAAACAMLTAALKALPEWPIALLDIYMHDALGGRQWASHSACKPFVDNVRTAWAPP---------------------------TPPQAKPV---RRGSPVSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEEAKTFSGFEKLDLEGEDDRIPAVSDRFSRKV--AEEAILLALHERFGSSSGDGLERERERRFKGWSHSEKKTEWQVVLAATELSTLTAVRAFVAPHLNRWLNSPAFKDMA--------RPLSPE-NQQGDGTVVDAILSIDTARPSLKPIYRSALQSSLVAIGGGS---VATKSGGVEAPDPGISGGDGA------SXXXXXXXXXXKVEATERTKIVLACLFEALGAKRATREVARVLCTLSA--GAAETMAAXXXXXXXXXXXXTPGVSPXXXXXXXXXXXXXXXXXXXAPPALLPVLGSLPERCKDVVGLALEVLETGQAAADMLASQGAAAAAAAGADSRAVVFSSANSSGRDLSYLAALSGPALRRWAATLAATVREMIVWRARNDCAAAREAGNRRKTA 691
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI) HSP 1 Score: 194 bits (492), Expect = 1.760e-47 Identity = 100/171 (58.48%), Postives = 126/171 (73.68%), Query Frame = 1
Query: 97 GRGGF-RVDEILRLCPESMGTGTTNYDAAGDEDRAMKAAAVAEIKALLAQVKSNLKDPDPNLCRGLAQMADLRPKVFREPELLEAVCELLTSKGGKTAIQASE-QEPPREAQAAACSILTNALRALPDWPLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTAWEPPPAPR 603
GRG RV +IL +CP +MG+G ++ ++ AV IK LL QVK N+K+PD +LC L +MA+LRPKVFREPELLE+V E+LT KG KTAIQ+S +E P AQAAAC++LT AL+ALP+WP+ALLD+YMHDALG RQW SHS C+ VDN+RTAW PP P+
Sbjct: 11 GRGSENRVQDILSMCPATMGSGLQAALNETEDSGVLRTKAVDTIKGLLQQVKENIKNPDRSLCSDLQRMAELRPKVFREPELLESVGEVLTGKGAKTAIQSSGGREAPCVAQAAACAMLTAALKALPEWPIALLDIYMHDALGGRQWASHSACKPFVDNVRTAWAPPTPPQ 181
BLAST of mRNA_H-paniculata_contig578.13370.1 vs. uniprot
Match: A0A151ZJI7_9MYCE (Integrator complex subunit 1 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZJI7_9MYCE) HSP 1 Score: 62.4 bits (150), Expect = 4.210e-6 Identity = 35/110 (31.82%), Postives = 53/110 (48.18%), Query Frame = 1
Query: 250 SNLKDPDPNLCRGLAQMADLRPKVFREPELLEAVCELLTSKGGKTAIQASEQEPPREAQAAACSILTNALRALPDWPLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTA 579
+N +PD N L +A P +F ELLE + LL K I ++ AC++L + + DWPL + VY+ DA+ +RQWV C+ V N+ T+
Sbjct: 139 ANQNEPDKNAYSSLLVLAKRSPDLFSSGELLEPLLSLLR----KDPIHVQPKKN-NLLSLLACNLLMSGYENVSDWPLPFMQVYIEDAIADRQWVDDPNCKYFVSNIITS 243
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 196.1 |
| Seed ortholog evalue | 6.6e-47 |
| Seed eggNOG ortholog | 2880.D7FPC4 |
| Preferred name | INTS1 |
| KEGG ko | ko:K03178,ko:K13138 |
| KEGG Pathway | ko04120,ko05012,map04120,map05012 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000428,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006351,GO:0006366,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009301,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010466,GO:0010467,GO:0010605,GO:0010941,GO:0010951,GO:0016070,GO:0016073,GO:0016180,GO:0016591,GO:0018130,GO:0019222,GO:0019438,GO:0030162,GO:0030880,GO:0031123,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032039,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034470,GO:0034472,GO:0034474,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040007,GO:0042795,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043281,GO:0043628,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045861,GO:0046483,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0055029,GO:0060255,GO:0060548,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234,GO:2000116,GO:2000117 |
| EggNOG free text desc. | U2 snRNA 3'-end processing |
| EggNOG OGs | COG0476@1,KOG2012@2759,KOG4596@1,KOG4596@2759 |
| EC | 6.2.1.45 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03041,ko04121,ko04147 |
| Exons | 10 |
| Model size | 2462 |
| Cds size | 2433 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig578.13370.1 >prot_H-paniculata_contig578.13370.1 ID=prot_H-paniculata_contig578.13370.1|Name=mRNA_H-paniculata_contig578.13370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=811bp
MASRQPRWPNQEIPGRGQIRIRVGRGGFRVDEILRLCPESMGTGTTNYDA AGDEDRAMKAAAVAEIKALLAQVKSNLKDPDPNLCRGLAQMADLRPKVFR EPELLEAVCELLTSKGGKTAIQASEQEPPREAQAAACSILTNALRALPDW PLALLDVYMHDALGNRQWVSHSRCRLLVDNLRTAWEPPPAPRPTSESAAH KVAGNVAAAGALATAAPPQNAPNVNNRRPAPSPSSATPPAAKRPRLPTAA ADEGKATVAAAAATTGAMEGGSEESSSGEEEVVGEGGAVGDVVVPVVIKR GASVISLVTGAGAGGGGGGDDSSSSDGEEFVEEGGHVGAVLPVDSAGAGA ERAAAATAAVVAQATAVAQALARKREEEARTFSGFERITLQGEDDGLPPV FDRFSRNRSDAEEVIVSALRERFGMERRESVRTQRVRGWDDSEKRTEWQV VEAVKDLSTLSSVRAFAAPHISRWLNSPAFKQLSSELLGVLVRRVDPDAG GEDDALVVNKILTVDTTKPSLKPLYRTALQNLLRSHPGFSPMVLESSVNG LGSPKGGGGDGGEIAGADSGGTSEGTAMTQASVKERMKTVLSCLFDALGQ SRATTEVARVLCTLCARTAAASTAAAAGEGAPWPGSAGIEGASGARRGTL APAAAPKALLPMLESLPHRSTEVLGLAVEMLEIGQAAADALVAIGSETEG GGGGERGAGIFESVDAAGRDLSYLRGLSGPSVRRWAAILAATVREVVLWR ARRDCMTVRSSARQRAVAVAAEAQAASTGAIQRKRKAAGGAPGRGGGAGG RGPTGNVWTMG back to topmRNA from alignment at H-paniculata_contig578:13394..24226- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig578.13370.1 ID=mRNA_H-paniculata_contig578.13370.1|Name=mRNA_H-paniculata_contig578.13370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10833bp|location=Sequence derived from alignment at H-paniculata_contig578:13394..24226- (Halopteris paniculata Hal_grac_a_UBK monoicous) GTAGGAGGCATACGAGGTAACGAAGTCATGGCTTCAAGGCAACCAAGATG
GCCAAATCAAGAGATTCCAGGTAGAGGGCAGATCAGAATTAGAGTTGGTA
GGGGGGGGTTTCGCGTGGATGAGATTTTGAGGTTATGTCCGGAGTCCATG
GGAACAGGCACTACCAACTACGATGCTGCAGGAGACGAAGACCGGGCCAT
GAAGGCCGCTGCGGTGGCCGAGATCAAGGCGCTCTTGGCTCAAGTCAAGA
GCAACCTCAAGGTATGCCCATACGCTCATGTTTCATTTGGTTCTTGGTCG
TTTTTTTTGTAGTGGTGGTCGGCGTCGACATGTTCGACATTGGTGTTGGC
TGTGTGTCTGGCTGTATTGTGGTTTTCAAAAATGAAACCACCAGGGGCAA
TCAGTATCTGCCCGTCACTCTATATCGAACGAGGCTGGTGGGTTTGCGGC
TGTCGCAGTTGTTTGGGTGAGAGAACTGTGCTACTGATTGGACTGACTGT
ACTGCCTGTGAAGATGTCCTGGCCGTCGATCAAATAGAAGTGTGTCCATA
AATCTGCCCGCTGCCTGCCATGCATACAGGGTACGTTTAGAGGTGGTAAG
AGATGGACACATTCGTTTTTGGATAGCTTTTCGACCGTTACACATGGTGC
CTTCACTACCTACTCTGTACTGTACTGTGTACAGCTGTCCTTTCTTCGTG
GGAGATTTTTGGTGTTTGTTCTGGGTGTACGGGTCCGGAATGAGCATACG
CCTCTGTTGACATCCACGAATGGTTGAGTTGGGCGTAACGACTACCGGCA
CAAGACCCAACGCTTTAGCATTCGACTGACCAGCTGAGCATGGCTCTCAC
CAGTCGTTTGGGATCCTTATGCGTACTAGTGTATGGTGGTATCGGCTCGG
TTTGCCCGCATTAAAAAATGTGTTCCGCACCGGGACTACATTCGAGCTCT
ACTCTCTATCGCTGCTCTACCAATGGGCAGTCAGTCCCCTGTTGCTCTTG
GCATTACGTGGCGAGCGTTTGGAAATTGTTATCGTTGCGATTGACAACAA
AGTGGGACAAAAAAGCATCCAAGGTACAGTACCTGGTTACATCACCAAAG
TCCAAAACCACGAACACAAGACCTGCAGACCCGCTTCTGCGAGAGAACAC
CCGCACATGTACCATTTGGACCCAGCCACCCAAATATGCTTGCTATCCTT
CGTGCATTATTGTAGACCGGAATTCATTTGCTGTCAAGTTTCGAGTTGTC
CGAGAAATGATACATGAAAGTCGATTGAAGACTCGAAATTGAGAGCACTG
TAGATTTTTCTCTCGAGTATAACATTGCGGTCTGTCCCGTTTTCTGCACC
GCGACGTTGCGTGTGCTGACGCATTGCAGGACCCAGATCCCAACTTGTGC
AGAGGTCTGGCGCAAATGGCCGACCTGCGACCGAAGGTGTTTCGGGAGCC
CGAGCTGCTGGAGGCCGTGTGCGAGTTGCTGACGTCGAAAGGAGGCAAAA
CAGCCATCCAGGCGTCCGAGCAGGAGCCGCCGCGAGAAGCGCAGGCTGCG
GCTTGCAGTATCCTTACCAACGCACTACGGGTGTGTATCTATCCACCCAA
GCACTGGTTGAGAGGTTGCTGTACCCTGTGCTAACAACTGAAAGATGAAA
CAGGATGGGACCCCGTCTCGGTATACAACGAAGAACTACGGTCAACCTTC
AACTAGCATACAATTGGTCATGATCCATTTATGGTTCACATTCATGGCTG
AACACATCTTAAAATATATTGATACATACGATTGCCCCTGATGGATCGTG
AAGATCCCGATTTAGTCGCGCGTTTAGGGGGTTGACTCTATGTACTGGCG
GTAACAATAGCTGACTTCGATCGCTTTTTTATTTGAGATGGTCATAGGTT
GTGACGTAGACTTACGTTACGCCGAACGACACTGTTCGCCGTCGGAACAA
ACACTGTTGCGTCGATCCGCCGAGTGACACGGTAGCGTTGATGATAACGT
TCTTCTCGGAGCAGTGTCCATTTTCTATCCAATATTGTCTTTCCTAAATT
CTTACTCGCCATGGTCTAGCTGTGACCTCCCTACTCCTCGTAGTGTGGAA
AAATAATGGTGAGTGGCCTCGAGTCTGTTTGCCCCGAGCGGCACGATTCC
GTGGCATATGTTGTGCATCTGCGGCGTTATATTTGGTTGGAATGACCAGT
TCGCTGCAGTTATGACATGAGAGAAGGGAAACCGTAAATCATATCCCTGA
CAGGTGCTCGAGTTACGGTGTGCGACTCGTGAAGCATCGAGTAGAAGGCA
TAAACAAGTATCGCATAAACACAGAACAGATCAGATCTCGAGATCTTTCA
ACGGCAGAACAAGTCCTCCCACCGAATCACTCCTCATACAGCGGAGGTTT
TGCATTGTTCCGAAGTTGTACCCGCCACGGCATGTCTGAGAAACGAAAAG
CGATTCGCCAAAGATGACCGCATCCCCATATACCAGTGTGAGATTCACGT
CGACCAGCATGTGGGCGCCATTTCAGTTGATTCTGCCTCATCCAGCACCG
CTGCACTCGCTCCACCTCTGCTATCATACCCGCTGACCCTCGTGCGCTCA
ACGCCGAAACCTCCTCTATCGACGCTTTGCACCCCTCAAACCAACGCATT
CGTCGTTACAACCAGGCGCTGCCCGATTGGCCGCTGGCGCTCCTGGACGT
ATACATGCACGACGCCCTGGGAAACAGACAGTGGGTCTCCCACTCCCGGT
GCAGGCTCCTCGTCGACAACCTCAGAACTGCGTGGGAGCCTCCTCCTGCA
CCACGCCCTACTTCAGAATCCGCTGCTCACAAAGTGGCGGGTAACGTAGC
CGCTGCAGGCGCGCTCGCTACTGCTGCCCCTCCTCAAAACGCTCCAAATG
TCAACAATCGTCGCCCCGCGCCATCGCCATCCTCCGCAACGCCGCCCGCC
GCCAAGCGCCCCCGCCTGCCTACGGCGGCGGCGGATGAAGGGAAGGCTAC
TGTTGCCGCCGCTGCTGCTACAACCGGCGCGATGGAAGGTGGCTCGGAGG
AGTCCTCTTCAGGAGAGGAAGAAGTTGTGGGTGAAGGAGGTGCCGTTGGA
GACGTGGTAGTGCCGGTTGTGATAAAAAGAGGCGCGTCAGTGATATCCCT
TGTCACGGGTGCGGGTGCCGGTGGTGGCGGCGGCGGAGATGACTCGTCGT
CATCAGACGGAGAAGAGTTTGTGGAAGAGGGGGGACACGTTGGCGCGGTT
TTACCGGTAGATTCGGCAGGGGCCGGGGCGGAGCGGGCGGCGGCTGCGAC
CGCGGCTGTGGTGGCCCAAGCGACGGCGGTGGCGCAGGCCTTGGCCAGAA
AGAGGGAGGAAGAAGCAAGGACATTTTCAGGGTTCGAGAGGATCACTTTG
CAGGGGGAGGATGACGGTCTTCCGCCGGTTTTCGATAGGTTTTCGAGGTG
AATGCCGGAGGGGGAGTAGTCGGAGGAATAGCTATTCTACTGATAAAAAA
AATACGATAGTGCGTAGGAGTTGCGCTGCAGTACCCGGGTGGCGTCCCCA
CATGTATGGTCTGATTTGTGCTTGGACCTCACCACCATTACTATTTTGAT
GAATAGGTGGAACAGTAAAAAGCATGTTGATACATGGTCGCCCGCGTGGA
TGGGTTTATCACATGTCTGTCTGTTTGTTTGTCTATATGTCTCATCCTTG
CCCGCAAAAGGGGCGTCGGTTGTTGCTCTTGTAGTACTGTACCGGAACGG
CGACTCAAGAAGTGGCAGTAGCCATTTGACTGCAATTATCAGCGTACCTC
TTTTCTTCCCGTTGTACAACCGCTCAAACCTGAAACCCGTCACGAGTCCC
ACTGCTCGCGCCCTCAGCCCGCTGTACGGGGCCGCTGGCCAAATGAGAAT
CGACCACACTGGTCGGAGCTGCATAACCCTCGCCCTGCACCTGTTTCTCT
ACTTCCATCATCCATCGCCCGCCCATGCCCTGCCCTGCGCACATGTGGTG
GAGCAGAAACCGAAGCGATGCGGAGGAGGTCATTGTATCGGCCCTCCGTG
AAAGGTTCGGTATGGAGCGGCGAGAAAGTGTACGAACTCAGCGAGTTAGG
GGATGGGACGACTCGGAGAAGAGGACCGAATGGCAGGTGGGGACGGTGCT
AGACGTCGCCTAGGCTAAGGGGCGAAAGGAGGATCAACACATTCAGTACT
GTGTGCTGTGTTTATTGGGGTGCCTTTTTCCATGTGTTTTTTGCCATTTG
GGGGGTAGTGTGTGTACGGCGTGTTGGTAACATGGCACCTCCACCGTCAC
AGTTTTGAGAACTCCCCCTATCGATTCGAATTCTTCAATATTTCAATACA
ATGCCTATGGGGAGGTGACGTGTTCCACACTTCTATACATCCGTCAACGC
TGGCGCCGGACCTCGGAATGTGATTCAGTCGTAGGAGGGGCATGGGCATG
CAGCCCCCGTCGAATGTGACAACCCATAAATCGTTGAAGTTGTTGCGCCA
TATAGTTTTGGCTTTGCTGGCTGGCTGGCTGGCTTGCCGCAACCAAACAC
ATGAAACGAAACTTGATGTCAACAGGTGGTCGAGGCGGTAAAGGACCTGT
CCACCCTGTCCTCGGTTCGGGCGTTCGCTGCACCACACATTAGCCGGTGG
CTTAACTCCCCAGCTTTCAAGCAATTGTCAAGGTGAGTCCTCGAGGTTTA
GCACCCACAACGATGGGCGGTAGTTCGTCGCCTTGTTCGGAGTGCGAGAA
AGCGAACATGGGGTAATGTCGGCGATCCGCGAGTGAGTAGCCGGCTCTTG
TGCTACGTCCGAGGCTTGCTCTACATGTGCTACATTCCGAACGATGATCG
CACCGGATTTCGTTCGCACAGCGTCACTGTTGCTCGTTTCGTTTTGCAAA
TGGAACCATCATTCATATGCATGGGAGACGTTGCCCTTGTGCTCGGAGAT
GTTGCTCGCATATAAATGCTGCACGTACTATGGGAAATGCTGCTCTTATG
CTTGATTCTTGTGTAGTGTGTGCTTTGTCCCTGCACCTAATTTTTTCAAA
ACCATGTCATGATCCATAGTTATTATCCAGACATGCGTTTTTGCCTGAGG
CCTTTGTATTTACTTTATTTCAGTTGCAGAGGGTCTACTCAGCGGTTGCC
AGCTGCCAGGCACACCCCTTTCCAAAGGTGTGGGGTATGGTTGGTATTTG
TTGTATGTGTGGTTTTGCTTCTCAGAGCTTTTGTCCTTTGACCGCGGGTG
TCAGGACTGAAGTTTGTGAAAAAAATACACTCACAATGGCTCGCCACGCT
CCCAGTGGCTCGCAACGTTCACATATATAGGCACAGCCTCCACGAATATT
CGTTTTTTTAAGCTACTCAAGCACAAAGTTCAAAATATGGTCAGAAATCA
TCATCACCTTCTGTTTATCCCGCATGAAGCGATAAGGATGTTGCTCACGT
GACCGTTCGGTTGGCTCTCGCTCCGCGGCAGCGAATTGCTGGGAGTGCTG
GTGCGGCGGGTGGACCCAGATGCCGGAGGAGAGGACGATGCACTCGTAGT
AAACAAGATTCTGACGGTGGATACCACGAAACCGTCGCTCAAACCTCTGT
ATCGGACCGCGTTGCAGGTAGGAATCTGAGTCGTTGTTTTTGTGGTGGGA
GGGGTATTTACTTGGTAGAGCATGTTGGGGGTGGGAGGTAAGGTTGGTTT
CCTTTTGGGCGTGGTCGAATTGCATTTGGGGTGGGGGGGTGAGCGGTTGT
GTATATGTTGTCCTTGTCCTTGTTGTTGTTGTTGTTGTTATTGTTATTTT
CCTTTTTTTCGTATAGGGCATACTCGGGAAGAACGGGCTTCAATACCCTT
GCTACGACGATCGGTGAGATAAGCGAGACCATATATAGTGTTAGCCCCTG
TTCTTGTTCGGCACTGATGGTTGAGATATGTTTAAGAATTGCCGCCAGGC
TAATGACTTCTTGCTTGATATGCTGTTATTGTTTCTGTTGCCGCACACGC
TGTGCACCGCGTGTTCTGATGAGCGGCAGCAGTTATATCCGTAAATCCGA
CCGCTAACCCAGTGTGGCAGGAAATGCTACCCATAACATCAACATACCTC
ACTCCCCATCACTGTGAACCGTGGACTGTTCGATTGCAAAAAAAGCACAC
TGGGCGTCGCCATAACGCGCTTACATTGTCAAGTTTCCAAAAGAGCCGAC
CAGCATGATGGTTCGCCAATAGAAGATAAAACGTGCTCGAAAAGGGATAG
CCGTTGTGAGGCGTCTTTTGGCTGGAAAACAAGCGGCGATTGGCCGTCGG
CGAGCGCTACTCTGTAAGAGAATATTTCTTCCCTCGCGATGGACGAATCG
ACGACGACGACATGATAAATAGATAGTGGTCGACATTCCTTCCAAGTTCT
AAGAAGCCATATCCAGGTTGCAGCATTCAGCACGGTTCATGTGTGGGGAA
GAGAATTGCGAAGTTGGGAGTCACTTGTCGAGGAGAGATCATTCCGTTCA
TAAGCAACCCTCAAGAACACCCCCCTGCACACACACACACACACACACAC
ACACACACACACACGTTGTTATTATCGTCGTTGGACAGAATCTTCTTCGC
AGTCACCCAGGCTTTTCTCCGATGGTGCTAGAAAGCTCAGTTAATGGCCT
GGGCAGCCCTAAGGGCGGTGGTGGGGACGGCGGTGAAATTGCCGGTGCAG
ATTCCGGCGGCACGAGCGAGGGTACCGCCATGACGCAGGTGTGACTTGGC
GCGTGATAGAAATTCATTCGAACCCCTGCTAGGGTTGTTGGTAGTCTAGC
GAACTGGGGAGTAACGTCCTTAGCAAAGGAAACAATCTTGGAGTCCTTGA
GACAGAGAGAGGCGATCGGTTATACTCCTTGTCTTAGTTTTTTCCGCCGT
AAAAGCTTCTATCAGAGAGAGCCACTGTTTTGATACACTACCCTTGTATT
TCTGGATGTACATACGGTCATTTGGAGCAGCAGGCCTCACTTCATGCCGA
ATGACGATAATGATGATGAGTGGCACATCGTCTGCCAACGATGGTGTCCA
TAACAGCACTCTCATGCACACAACGTATTGTTGTAAAAAATTACATATAT
ATATATATATATCCCATCGTACCCCCAATCAACAAACCCCACGGACATCA
TGAAAAAATATTCCAGGCGTCAGTAAAGGAGCGCATGAAAACAGTCCTAT
CTTGTCTCTTCGACGCCCTGGGGCAAAGCCGCGCGACTACAGAAGTCGCC
CGCGTTCTATGCACGCTCTGTGCGAGAACCGCGGCCGCATCAACCGCAGC
AGCAGCTGGAGAAGGAGCACCATGGCCCGGGAGCGCGGGTATTGAAGGTG
CGAGCGGCGCGAGACGGGGCACCCTTGCTCCTGCGGCAGCGCCTAAAGCG
CTGCTACCGATGCTGGAGTCGTTGCCGCACAGGTCCACGGAAGTGCTAGG
GCTAGCGGTGGAGATGTTGGAAATAGGGCAGGCGGCGGCAGACGCGCTGG
TGGCGATAGGGAGCGAGACAGAGGGGGGAGGAGGTGGAGAACGAGGGGCC
GGCATTTTTGAATCCGTGGATGCTGCTGGAAGGTGCGCTAGAGTATCGTA
GTGGGCCGGTGTTGGTTCGCTCGGTGGGTCGGTGGCCGATACGGTGGGTT
GTAGGGGGTGTGAAGATAATATAATCGCATGGGACGGAGCAGGTATGGTT
GATGTTTACTGTCGTTGGCTGTCACTGATGGAGGATTATGGAATCATCGT
GATGATTGATTTTGAGAGACGTGCAGAATTGGTTATGTGTGTGTTTCCAC
GATCGCTGAGGGGCAGCCCCACGCCCAGCAGAGCTATGTCTCGGCGTAAG
CACCCCTCCCCCCCCCCCTCCCCCCCAGCTCCGTCATCGAGAGGACGTGT
TGACAATGCCAAACGTGAGTATGCCCTCCTCGTGTTCACGTTGACGGGCA
CGAAGAAATCCCTTCATTCGATCCTTTATATATGTACTCGTTCATCAATT
AGCTCAGTCACTCCTTTTATCACTCCTTTACGGCATGTAGTTTAGACCAC
TTTTATCCAAGAAAAAATTGAATTCCAGCGAAACTCATTTTTCGCGCACG
CTTACCTTGCGTCAAAACAAACCTGGAAAAAAGTTCTTGTGCAATTTATC
TGCGAGACCCGGAGAAAGATAAGCAGCAGGACGATGGGAGCATGAGTCGT
CATTCTTTATACGTTCACTTGGAGAATGGCAAATATAATCTTCTGTAATG
TTGCACAAATACTCTTCTGCTATAGCCGGGTCATCTTTTCCATTTCGAGT
GCGCTTCGGCTAGGCTCGACATCATTCTTGATGTCCAACATGCTGTCGTC
TCCGCTCTCGTTAGCGTGCTTCGAGGGGTGTGCATGCTCGCCGTCATCAT
CTTCATCCATGCCAATGGCGGAAATAGTGATGGCGACGTTCAGCTGCTGC
AAGGCTGCTAGCCCCGCAGCTATCACCTTTATATTGTTCATCTCTCTCGA
CTGTGCCGCCGGCTGTTTGTCATGTATGACGCCTCCGTATGTGAGTGCCC
TGTGCGGGTGCGTCCTGCATGGCTTTGGCGGCTGCACACCATCGTGAGAC
GCCCGCGTTCGCTACAGTATTCGGTACAGCAAACTATAAATGAATAATTA
GGGGACCGACAGTTTTGGGCAATCTGGCCCCGACGAGGGTCTGTGTTAAA
AAAAGTCAATTTTACTTGAGAGTGTTTTTGCTTGGATAACTTGACAGACA
GCAAGAATCCCAGGGATCATTGAGCTTTTTTGCTTTTGCCGTGTTTTTTT
GCTTGGATAAGGAGTGGTCTTACGGGCAAGAGAGAAATCTGACTCCAGAA
TGATGTGCTCCCCCGAGCGACATACTGCCACCCCCCGACGTTTCATCTCT
CTCGGGGTGTCTCTCTCTCTCTCGAACCCTCGTATCCCCTTGGCAGGGAC
TTATCTTATCTCCGCGGGCTATCGGGCCCCTCTGTCCGGCGTTGGGCGGC
TATACTGGCTGCCACAGTGCGCGAGGTGGTCCTCTGGCGTGCTCGCCGCG
ACTGCATGACTGTTCGCTCGTCCGCCCGGCAACGCGCTGTGGCCGTGGCC
GCGGAGGCACAGGCTGCTTCGACCGGTGCCATACAGGTTAGGCGTTTTGT
AGTGCAATCGGTGCATGGGGCCACGGTGTGAGGGAAGGTGTGCAATCCGA
GACATGTGGTCGCTTCTACGCGCTATGGCCGCAGCTGCTATTGCACCTGT
GCCCCTTTTATCGCACGGGAGGTGTTGTGGATGGCGAGGGATGATGAGGC
ATTTCCGAGCAATTTCTACCATAAATGCTTGATAATTGTCTCAAAAGTGT
TGCTGACCTCTCTCTCTTACTGGTCATTATCTAATTTTGCTGATCAACGT
ATAACAAGTGAATTTTGAGTTCAGCTGTACAACCAACCTCAACAGGGCTA
CAAAGAAGTTATTGTACAAGCTTTGGAGCTGTAGGTCAACTAACTGTGGC
AGGGTTGATCCCTCCCCCCCCTCGAATACAGCAATGTGTGAATATTTGTA
GGAACACTGCTATCCCTTTAGCCCCACCTGGTGTGTCGCTGGATTGGCAC
TGACCCTTGCTCGAGCACAGCTACCTTGGTCAATTGGTGTTTAGGAAGTA
ACAAACTTCACCCCCCAGATGAATACGAACAGTTTCAAATGCTCACCAAA
AACTAAAAGTATTCGCCTGAGTTTCAGAATGAGCTCCATGCATTCCTATG
TGCCCGTGACCACCCACGACTGTTAATAATACTAGTAAATCGAATAGACC
CGGGTGGCTTCTGTATTCTGTATGTCCGCTCATCTTGAAACTCAGGCCAA
TAGTTTCGTTTTTTTATGAAGAACTATTTGCATGTATTCGTATTTGTCCG
GGGGGTGCAAAAATTTCAACAGTGGGTCTAGCCGTTATCAACGACCAAAT
GTGGTGTCGAGCATCGTGACAGATACCCTGTCCAAGCGAAAAAAAACAAA
AAAACAAACAAACAAAACACCACGATGGGTACTGCTACGGCGAGACATGT
CAAATTCCATTCGAAAGAGTCAAATATAATCTGCTCTACGGGTTTGGCTG
ATTCGATTTTATGTTTTAAAAAAAGCGTCATTTTTTTGCTCTTGGCACCG
AAATTACAGCTGTCTCCAGGAACCCTGTCGGGAATAATGTAGTTTTTCCA
GTAATTACTGTAAAACTAACCACCGTACTTGCCAAGTTATGATCGTGACG
CGGGAAAAGCAATCGTGTGAAGTGTTCAAGAAGTGCATTTTTTTTTTTTT
TCTGCTCTTATATCCTTCCTTCCAATATTTTACGCCGACATTGTATCGAA
AGAATCGGAAAAGGGGTTTAGGAACACTCACGACAAAACAATGTAAAATT
ATTATTTAATCAAACGTGTTTTGTGATTTTCTGGTGAAGGAGACCGAGGC
AAAATACGGTGGTCGCTTAGACTCCAAGTAAGAAAAAAAAAAAAAATGTA
TGGACCGACGGTGTTGAATAGGAAGGAATCCAAGTTTTGACCAAAAACAA
GATCACAGTTCATGTAGAACATGACAAACTTGGGGTCCGTTTCCTTCGCC
CTGGAGATTTTCTGACGAGATGATGAACTTGCTCATATTCGTTTGTTTGT
TTGTTTCCCTTTCTCCATTGTGAAAATATGAGTATGGTCTTGACTCAATG
AACACTACCATCGCTGCTTGTTCTCCGTCTGTACTTTTAACCAAAGCGCA
AGCGCAAAGCGGCCGGTGGTGCACCCGGGCGCGGAGGGGGGGCGGGCGGC
AGGGGCCCGACGGGGAACGTTTGGACTATGGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig578:13394..24226- >mRNA_H-paniculata_contig578.13370.1 ID=mRNA_H-paniculata_contig578.13370.1|Name=mRNA_H-paniculata_contig578.13370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4866bp|location=Sequence derived from alignment at H-paniculata_contig578:13394..24226- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGCTTCAAGGCAACCAAGATGGCCAAATCAAGAGATTCCAGGTAGAGG GCAGATCAGAATTAGAGTTGGTAGGGGGGGGTTTCGCGTGGATGAGATTT TGAGGTTATGTCCGGAGTCCATGGGAACAGGCACTACCAACTACGATGCT GCAGGAGACGAAGACCGGGCCATGAAGGCCGCTGCGGTGGCCGAGATCAA GGCGCTCTTGGCTCAAGTCAAGAGCAACCTCAAGATGGCTTCAAGGCAAC CAAGATGGCCAAATCAAGAGATTCCAGGTAGAGGGCAGATCAGAATTAGA GTTGGTAGGGGGGGGTTTCGCGTGGATGAGATTTTGAGGTTATGTCCGGA GTCCATGGGAACAGGCACTACCAACTACGATGCTGCAGGAGACGAAGACC GGGCCATGAAGGCCGCTGCGGTGGCCGAGATCAAGGCGCTCTTGGCTCAA GTCAAGAGCAACCTCAAGGACCCAGATCCCAACTTGTGCAGAGGTCTGGC GCAAATGGCCGACCTGCGACCGAAGGTGTTTCGGGAGCCCGAGCTGCTGG AGGCCGTGTGCGAGTTGCTGACGTCGAAAGGAGGCAAAACAGCCATCCAG GCGTCCGAGCAGGAGCCGCCGCGAGAAGCGCAGGCTGCGGCTTGCAGTAT CCTTACCAACGCACTACGGGACCCAGATCCCAACTTGTGCAGAGGTCTGG CGCAAATGGCCGACCTGCGACCGAAGGTGTTTCGGGAGCCCGAGCTGCTG GAGGCCGTGTGCGAGTTGCTGACGTCGAAAGGAGGCAAAACAGCCATCCA GGCGTCCGAGCAGGAGCCGCCGCGAGAAGCGCAGGCTGCGGCTTGCAGTA TCCTTACCAACGCACTACGGGCGCTGCCCGATTGGCCGCTGGCGCTCCTG GACGTATACATGCACGACGCCCTGGGAAACAGACAGTGGGTCTCCCACTC CCGGTGCAGGCTCCTCGTCGACAACCTCAGAACTGCGTGGGAGCCTCCTC CTGCACCACGCCCTACTTCAGAATCCGCTGCTCACAAAGTGGCGGGTAAC GTAGCCGCTGCAGGCGCGCTCGCTACTGCTGCCCCTCCTCAAAACGCTCC AAATGTCAACAATCGTCGCCCCGCGCCATCGCCATCCTCCGCAACGCCGC CCGCCGCCAAGCGCCCCCGCCTGCCTACGGCGGCGGCGGATGAAGGGAAG GCTACTGTTGCCGCCGCTGCTGCTACAACCGGCGCGATGGAAGGTGGCTC GGAGGAGTCCTCTTCAGGAGAGGAAGAAGTTGTGGGTGAAGGAGGTGCCG TTGGAGACGTGGTAGTGCCGGTTGTGATAAAAAGAGGCGCGTCAGTGATA TCCCTTGTCACGGGTGCGGGTGCCGGTGGTGGCGGCGGCGGAGATGACTC GTCGTCATCAGACGGAGAAGAGTTTGTGGAAGAGGGGGGACACGTTGGCG CGGTTTTACCGGTAGATTCGGCAGGGGCCGGGGCGGAGCGGGCGGCGGCT GCGACCGCGGCTGTGGTGGCCCAAGCGACGGCGGTGGCGCAGGCCTTGGC CAGAAAGAGGGAGGAAGAAGCAAGGACATTTTCAGGGTTCGAGAGGATCA CTTTGCAGGGGGAGGATGACGGTCTTCCGCCGGTTTTCGATAGGTTTTCG AGGCGCTGCCCGATTGGCCGCTGGCGCTCCTGGACGTATACATGCACGAC GCCCTGGGAAACAGACAGTGGGTCTCCCACTCCCGGTGCAGGCTCCTCGT CGACAACCTCAGAACTGCGTGGGAGCCTCCTCCTGCACCACGCCCTACTT CAGAATCCGCTGCTCACAAAGTGGCGGGTAACGTAGCCGCTGCAGGCGCG CTCGCTACTGCTGCCCCTCCTCAAAACGCTCCAAATGTCAACAATCGTCG CCCCGCGCCATCGCCATCCTCCGCAACGCCGCCCGCCGCCAAGCGCCCCC GCCTGCCTACGGCGGCGGCGGATGAAGGGAAGGCTACTGTTGCCGCCGCT GCTGCTACAACCGGCGCGATGGAAGGTGGCTCGGAGGAGTCCTCTTCAGG AGAGGAAGAAGTTGTGGGTGAAGGAGGTGCCGTTGGAGACGTGGTAGTGC CGGTTGTGATAAAAAGAGGCGCGTCAGTGATATCCCTTGTCACGGGTGCG GGTGCCGGTGGTGGCGGCGGCGGAGATGACTCGTCGTCATCAGACGGAGA AGAGTTTGTGGAAGAGGGGGGACACGTTGGCGCGGTTTTACCGGTAGATT CGGCAGGGGCCGGGGCGGAGCGGGCGGCGGCTGCGACCGCGGCTGTGGTG GCCCAAGCGACGGCGGTGGCGCAGGCCTTGGCCAGAAAGAGGGAGGAAGA AGCAAGGACATTTTCAGGGTTCGAGAGGATCACTTTGCAGGGGGAGGATG ACGGTCTTCCGCCGGTTTTCGATAGGTTTTCGAGAAACCGAAGCGATGCG GAGGAGGTCATTGTATCGGCCCTCCGTGAAAGGTTCGGTATGGAGCGGCG AGAAAGTGTACGAACTCAGCGAGTTAGGGGATGGGACGACTCGGAGAAGA GGACCGAATGGCAGAAACCGAAGCGATGCGGAGGAGGTCATTGTATCGGC CCTCCGTGAAAGGTTCGGTATGGAGCGGCGAGAAAGTGTACGAACTCAGC GAGTTAGGGGATGGGACGACTCGGAGAAGAGGACCGAATGGCAGGTGGTC GAGGCGGTAAAGGACCTGTCCACCCTGTCCTCGGTTCGGGCGTTCGCTGC ACCACACATTAGCCGGTGGCTTAACTCCCCAGCTTTCAAGCAATTGTCAA GGTGGTCGAGGCGGTAAAGGACCTGTCCACCCTGTCCTCGGTTCGGGCGT TCGCTGCACCACACATTAGCCGGTGGCTTAACTCCCCAGCTTTCAAGCAA TTGTCAAGCGAATTGCTGGGAGTGCTGGTGCGGCGGGTGGACCCAGATGC CGGAGGAGAGGACGATGCACTCGTAGTAAACAAGATTCTGACGGTGGATA CCACGAAACCGTCGCTCAAACCTCTGTATCGGACCGCGTTGCAGCGAATT GCTGGGAGTGCTGGTGCGGCGGGTGGACCCAGATGCCGGAGGAGAGGACG ATGCACTCGTAGTAAACAAGATTCTGACGGTGGATACCACGAAACCGTCG CTCAAACCTCTGTATCGGACCGCGTTGCAGAATCTTCTTCGCAGTCACCC AGGCTTTTCTCCGATGGTGCTAGAAAGCTCAGTTAATGGCCTGGGCAGCC CTAAGGGCGGTGGTGGGGACGGCGGTGAAATTGCCGGTGCAGATTCCGGC GGCACGAGCGAGGGTACCGCCATGACGCAGAATCTTCTTCGCAGTCACCC AGGCTTTTCTCCGATGGTGCTAGAAAGCTCAGTTAATGGCCTGGGCAGCC CTAAGGGCGGTGGTGGGGACGGCGGTGAAATTGCCGGTGCAGATTCCGGC GGCACGAGCGAGGGTACCGCCATGACGCAGGCGTCAGTAAAGGAGCGCAT GAAAACAGTCCTATCTTGTCTCTTCGACGCCCTGGGGCAAAGCCGCGCGA CTACAGAAGTCGCCCGCGTTCTATGCACGCTCTGTGCGAGAACCGCGGCC GCATCAACCGCAGCAGCAGCTGGAGAAGGAGCACCATGGCCCGGGAGCGC GGGTATTGAAGGTGCGAGCGGCGCGAGACGGGGCACCCTTGCTCCTGCGG CAGCGCCTAAAGCGCTGCTACCGATGCTGGAGTCGTTGCCGCACAGGTCC ACGGAAGTGCTAGGGCTAGCGGTGGAGATGTTGGAAATAGGGCAGGCGGC GGCAGACGCGCTGGTGGCGATAGGGAGCGAGACAGAGGGGGGAGGAGGTG GAGAACGAGGGGCCGGCATTTTTGAATCCGTGGATGCTGCTGGAAGGCGT CAGTAAAGGAGCGCATGAAAACAGTCCTATCTTGTCTCTTCGACGCCCTG GGGCAAAGCCGCGCGACTACAGAAGTCGCCCGCGTTCTATGCACGCTCTG TGCGAGAACCGCGGCCGCATCAACCGCAGCAGCAGCTGGAGAAGGAGCAC CATGGCCCGGGAGCGCGGGTATTGAAGGTGCGAGCGGCGCGAGACGGGGC ACCCTTGCTCCTGCGGCAGCGCCTAAAGCGCTGCTACCGATGCTGGAGTC GTTGCCGCACAGGTCCACGGAAGTGCTAGGGCTAGCGGTGGAGATGTTGG AAATAGGGCAGGCGGCGGCAGACGCGCTGGTGGCGATAGGGAGCGAGACA GAGGGGGGAGGAGGTGGAGAACGAGGGGCCGGCATTTTTGAATCCGTGGA TGCTGCTGGAAGGGACTTATCTTATCTCCGCGGGCTATCGGGCCCCTCTG TCCGGCGTTGGGCGGCTATACTGGCTGCCACAGTGCGCGAGGTGGTCCTC TGGCGTGCTCGCCGCGACTGCATGACTGTTCGCTCGTCCGCCCGGCAACG CGCTGTGGCCGTGGCCGCGGAGGCACAGGCTGCTTCGACCGGTGCCATAC AGGGACTTATCTTATCTCCGCGGGCTATCGGGCCCCTCTGTCCGGCGTTG GGCGGCTATACTGGCTGCCACAGTGCGCGAGGTGGTCCTCTGGCGTGCTC GCCGCGACTGCATGACTGTTCGCTCGTCCGCCCGGCAACGCGCTGTGGCC GTGGCCGCGGAGGCACAGGCTGCTTCGACCGGTGCCATACAGCGCAAGCG CAAAGCGGCCGGTGGTGCACCCGGGCGCGGAGGGGGGGCGGGCGGCAGGG GCCCGACGGGGAACGTTTGGACTATGGGACGCAAGCGCAAAGCGGCCGGT GGTGCACCCGGGCGCGGAGGGGGGGCGGGCGGCAGGGGCCCGACGGGGAA CGTTTGGACTATGGGA back to top
|