prot_H-paniculata_contig57745.13362.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig57745.13362.1
Unique Name	prot_H-paniculata_contig57745.13362.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	82

Homology

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BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: A0A6I5NDM4_9CYAN (Photosystem I iron-sulfur center n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A6I5NDM4_9CYAN)

HSP 1 Score: 131 bits (330), Expect = 4.170e-38
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIA++PRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY
Sbjct:   29 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAASPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 109

[Close]

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: K9XT12_STAC7 (Photosystem I iron-sulfur center n=41 Tax=root TaxID=1 RepID=K9XT12_STAC7)

HSP 1 Score: 129 bits (325), Expect = 1.050e-37
Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAS+PRTEDXXXXXXXXXXXXXXXLSIRVYLG ETTRSMGLAY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDXXXXXXXXXXXXXXXLSIRVYLGPETTRSMGLAY 81

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BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: A0A088CIH6_9CHLO (Photosystem I iron-sulfur center n=2 Tax=Chlorophyta TaxID=3041 RepID=A0A088CIH6_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 4.960e-37
Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSH+V IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXX S+RVYLG ETTRSMGLAY
Sbjct:    6 MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXXSVRVYLGAETTRSMGLAY 86

[Close]

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: A0A097KM99_9CHLO (Photosystem I iron-sulfur center n=6 Tax=Chlorophyta TaxID=3041 RepID=A0A097KM99_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 2.350e-36
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACPTDVLEMVPWDGCKA QIASAPRTEDXXXXXXXXXXXXXXX S+RVYLG ETTRSMGLAY
Sbjct:   23 MSHSVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKANQIASAPRTEDXXXXXXXXXXXXXXXXSVRVYLGSETTRSMGLAY 103

[Close]

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: PSAC_SYNP2 (Photosystem I iron-sulfur center n=424 Tax=root TaxID=1 RepID=PSAC_SYNP2)

HSP 1 Score: 126 bits (316), Expect = 2.480e-36
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSHSV IYDTCIGCTQCVRACP DVLEMVPWDGCKAGQIAS+PRTEDXXXXXXXXXXXXXXX SIRVYLG ETTRSMGLAY
Sbjct:    1 MSHSVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDXXXXXXXXXXXXXXXXSIRVYLGAETTRSMGLAY 81

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BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: PSAC_THEVB (Photosystem I iron-sulfur center n=199 Tax=cellular organisms TaxID=131567 RepID=PSAC_THEVB)

HSP 1 Score: 126 bits (316), Expect = 2.480e-36
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            M+H+V IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIAS+PRTEDXXXXXXXXXXXXXXX SIRVYLG ETTRSMGLAY
Sbjct:    1 MAHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDXXXXXXXXXXXXXXXXSIRVYLGAETTRSMGLAY 81

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BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: PSAC_GUITH (Photosystem I iron-sulfur center n=17 Tax=Eukaryota TaxID=2759 RepID=PSAC_GUITH)

HSP 1 Score: 125 bits (315), Expect = 3.530e-36
Identity = 75/81 (92.59%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSHSV +YDTCIGCTQCVRACP DVLEMV WDGCKAGQIASAPRTEDXXXXXXXXXXXXXXX S+RVYLGGETTRSMGLAY
Sbjct:    1 MSHSVKVYDTCIGCTQCVRACPCDVLEMVAWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXXSVRVYLGGETTRSMGLAY 81

[Close]

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: M1KFN6_DIALT (Photosystem I iron-sulfur center n=4 Tax=Eukaryota TaxID=2759 RepID=M1KFN6_DIALT)

HSP 1 Score: 125 bits (314), Expect = 5.010e-36
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSH+V +YDTCIGCTQCVRACP DVLEMV WDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLS+RVYLGGETTRS+GLAY
Sbjct:    1 MSHNVKVYDTCIGCTQCVRACPCDVLEMVKWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSVRVYLGGETTRSLGLAY 81

[Close]

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: M1X443_9NOST (Photosystem I iron-sulfur center n=9 Tax=cellular organisms TaxID=131567 RepID=M1X443_9NOST)

HSP 1 Score: 125 bits (314), Expect = 5.010e-36
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSH+V IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQ+A++PRTEDXXXXXXXXXXXXXXX SIRVYLG ETTRSMGLAY
Sbjct:    1 MSHTVKIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQLAASPRTEDXXXXXXXXXXXXXXXXSIRVYLGAETTRSMGLAY 81

[Close]

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Match: A0A6B3LYA2_9CYAN (Photosystem I iron-sulfur center n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6B3LYA2_9CYAN)

HSP 1 Score: 125 bits (313), Expect = 7.120e-36
Identity = 74/81 (91.36%), Postives = 77/81 (95.06%), Query Frame = 0

Query:    1 MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDXXXXXXXXXXXXXXXLSIRVYLGGETTRSMGLAY 81
            MSH V IYDTCIGCTQCVRACP DVLEMVPWDGCKA QIAS+PRT+DXXXXXXXXXXXXXXXLS+RVYLGGETTRSMGLAY
Sbjct:    1 MSHKVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAAQIASSPRTQDXXXXXXXXXXXXXXXLSVRVYLGGETTRSMGLAY 81

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig57745.13362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6I5NDM4_9CYAN	4.170e-38	96.30	Photosystem I iron-sulfur center n=2 Tax=unclassif...	[more]
K9XT12_STAC7	1.050e-37	96.30	Photosystem I iron-sulfur center n=41 Tax=root Tax...	[more]
A0A088CIH6_9CHLO	4.960e-37	93.83	Photosystem I iron-sulfur center n=2 Tax=Chlorophy...	[more]
A0A097KM99_9CHLO	2.350e-36	93.83	Photosystem I iron-sulfur center n=6 Tax=Chlorophy...	[more]
PSAC_SYNP2	2.480e-36	93.83	Photosystem I iron-sulfur center n=424 Tax=root Ta...	[more]
PSAC_THEVB	2.480e-36	92.59	Photosystem I iron-sulfur center n=199 Tax=cellula...	[more]
PSAC_GUITH	3.530e-36	92.59	Photosystem I iron-sulfur center n=17 Tax=Eukaryot...	[more]
M1KFN6_DIALT	5.010e-36	91.36	Photosystem I iron-sulfur center n=4 Tax=Eukaryota...	[more]
M1X443_9NOST	5.010e-36	91.36	Photosystem I iron-sulfur center n=9 Tax=cellular ...	[more]
A0A6B3LYA2_9CYAN	7.120e-36	91.36	Photosystem I iron-sulfur center n=2 Tax=Oscillato...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.20		coord: 1..81 e-value: 9.9E-37 score: 126.3
None	No IPR available	PANTHER	PTHR24960	FAMILY NOT NAMED	coord: 1..81
None	No IPR available	PANTHER	PTHR24960:SF66		coord: 1..81
None	No IPR available	SUPERFAMILY	54862	4Fe-4S ferredoxins	coord: 5..71
IPR017491	Photosystem I protein PsaC	TIGRFAM	TIGR03048	TIGR03048	coord: 2..81 e-value: 3.1E-56 score: 185.5
IPR017491	Photosystem I protein PsaC	HAMAP	MF_01303	PSI_PsaC	coord: 1..81 score: 36.442
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PFAM	PF12838	Fer4_7	coord: 10..61 e-value: 4.6E-10 score: 39.9
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 1..31 score: 10.407
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 39..68 score: 8.718
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 48..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig57745	contig	H-paniculata_contig57745:517..762 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig57745.13362.1	mRNA_H-paniculata_contig57745.13362.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig57745 517..762 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig57745.13362.1 ID=prot_H-paniculata_contig57745.13362.1|Name=mRNA_H-paniculata_contig57745.13362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
MSHSVNIYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASAPRTEDCVG
CKRCETACPTDFLSIRVYLGGETTRSMGLAY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017491	PSI_PsaC
IPR017896	4Fe4S_Fe-S-bd
IPR017900	4Fe4S_Fe_S_CS