mRNA_H-paniculata_contig5685.13229.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE) HSP 1 Score: 261 bits (666), Expect = 5.790e-80 Identity = 140/338 (41.42%), Postives = 204/338 (60.36%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTGAMF 999
+G +VFK K DG+FKARLVV G + D G ++APV R+ S R+ A+ NNW +Y LD+ AFLN V+ + APG +S TG+P V L RS+ GL Q+P+LWN T+D L G+ T SDPCVY + + ++L+++VDDIL+TG +L+ + +L ++F +TD+GEV ILG++V R+ + GTL +SQ YV + L+RF M ANP G + ST +L K YQ+M GS++ L QCT+FD+ + +Q ++ S P Q ++ A +LRYLRG P +PI Y R + L ++D+S+ RSTTG +F
Sbjct: 25 LGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLF 362
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 268 bits (685), Expect = 1.920e-79 Identity = 142/338 (42.01%), Postives = 205/338 (60.65%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTGAMF 999
+G +VFK K DG+FKARLVV G + D G ++APV R+ S R+ A+ NNW +Y LD+ AFLN V+ + APG +S TG+P V L RS+ GL Q+P+LWN T+D L G+ T SDPCVY + + ++L+++VDDIL+TG +L+ + +L ++F +TD+GEV ILG++V R+ + GTL +SQ YV + L+RF M ANP PG + ST +L K YQ+M GS++ L QCTRFD+ + +Q ++ S P Q ++ A +LRYLRG P +PI Y R + L ++D+S+ RSTTG +F
Sbjct: 389 LGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLF 726
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 263 bits (672), Expect = 9.360e-79 Identity = 140/338 (41.42%), Postives = 204/338 (60.36%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTGAMF 999
+G +VFK DG+FKARLVV G + D G ++APV R+ S R+ A+ NNW +Y LD+ AFLN V+ + APG +S TG+P V L RS+ GL Q+ +LWN T+D L +G+ T SDPCVY + + ++L+++VDDIL+TG +L+ + +L ++F +TD+GEV ILG++V R+ + GTL +SQ YV + L+RF M ANP PG + ST +L K YQ+M GS++ L QCTRFD+ + +Q ++ S P Q ++ A +LRYLRG P +PI Y R + L ++D+S+ RSTTG +F
Sbjct: 233 LGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLF 570
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE) HSP 1 Score: 256 bits (654), Expect = 1.540e-77 Identity = 140/338 (41.42%), Postives = 203/338 (60.06%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTGAMF 999
+G +VFK K DG+FKA LVV G + D GS++APV R+ S R+ + NNW +Y LD+ VAFLN V+ + APG +S TG+P V L RS+ GL Q+P+LWN T++ L+ G+ T DPCVY + + ++L+++VDDIL+TG D+ L+ + +L ++F +TD+GEV ILG++V R+ + GTL +SQ YV + L+RF M ANP G + ST +L K YQ+M S++ L QCTRFD+ + +Q ++ S P Q +L A +LRYLRG P +PI Y R + L +D+S+ RSTTG +F
Sbjct: 126 LGTKFVFKKKLDGRFKAHLVVGGHRQEPGQDYGSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGG-DQQLVDQKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLF 462
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 259 bits (663), Expect = 3.690e-77 Identity = 141/334 (42.22%), Postives = 198/334 (59.28%), Query Frame = 1
Query: 13 WVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTGAMF 999
+VFK KAD +FKARLV G + G +APV RL S R+L A+A + W VY LD+ AFLN V+ + APG E+ D TTG+ V L +S+ GL Q+PSLWN I++ L G+ T SDPCVY + D +L+++VDDIL+TG +++ + +LM+ F +TD+GEV ++G+EV R+ + GTL +SQ Y L R+ M ANP PG + ST LL + +QA+ GSL+ L QCTR+D+ + V Q R + P Q H+ A +LRYLRG PD+PI Y + K L ++D+S+ RSTTG +F
Sbjct: 270 FVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLF 603
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.330e-76 Identity = 136/327 (41.59%), Postives = 201/327 (61.47%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNM----PSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASY 969
IG W++K KA G KARL+VQGW +H IDCG T+APV R SQ +L+A+A + V +D+ AFL ++E V+ +QA G+E D TG P VM L +S+ GL+Q+P + + ++ +GFT+ +SDPCVY G TY +L ++VDD + G T ++ + QL +KF +TD G L+LGME+ ++ G + +SQH YV++ LD++ M P+A P P I+ +P +A L K YQ +VGSL+ LT TR++I + V+ R M+ PT QH+V R+LRYLRG PD+P+ + R + +L Y DAS+
Sbjct: 937 IGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEI--SQSDGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEP----ENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASF 1257
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE) HSP 1 Score: 248 bits (633), Expect = 3.550e-72 Identity = 135/338 (39.94%), Postives = 196/338 (57.99%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTGAMF 999
+G + FK DG+FKARLVV G + D G ++APV R+ S R+ A+ NNW +Y LD+ AFLN V+ + APG + TG+P + L RS+ GL Q P+LW T+D L G+ T SDPCVY + + ++L+++VDDIL+TG +L+ + +L ++F +TD+GEV ILG++V R+ + GTL +SQ YV + L+RF M ANP PG + ST +L K YQ+M GS++ L QCTRFD+ + +Q ++ S P Q ++ A +LRY RG P +PI R LV + +S+ RSTTG +F
Sbjct: 432 LGTKFAFKRTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNYATGEPMMYELERSLYGLSQYPALWKDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYRRGNPVLPIVSKRGHFRLVALTGSSFGANPGNGRSTTGYLF 769
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 252 bits (644), Expect = 6.130e-72 Identity = 134/326 (41.10%), Postives = 192/326 (58.90%), Query Frame = 1
Query: 13 WVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCTRSTTG 990
WVFK KADG FK R+V QGW+ +DCGST+APV R++S R++ + N +D+ AFL ++E VF +Q PGFE D G VM L +S+ GL Q+P W +TID L +GF + SDPCVY N I L+L+VDD+L+ G + + +L +F +TDLGE SL+LGME+ R+++ TL +SQ Y S L+RF + + PT PG ++ S +LLD T++YQ +VGSL+ + Q R+DI + Q AR M+ P++ H+VA LRYL G D ITY + +L +SD+++ G
Sbjct: 1202 WVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGD-MVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNG 1526
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE) HSP 1 Score: 251 bits (640), Expect = 6.270e-72 Identity = 140/345 (40.58%), Postives = 202/345 (58.55%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTNDTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVG-------YSDASYCT-----RSTTGAMF 999
+G +VFK K DG+FKARL V G H+ E APV R+ S R+ A+ NNW +Y LD+ AFLN V+ + APG +S T +P V L RS+ GL Q+P+LWN T+D L G+ T SDPCVY + ++ ++ S++VDDIL+TG +L+ + +L ++F +TD+GEV ILG++V R+ + GTL +SQ YV + L+RF M ANP PG + ST +L K YQ+M GS++ L QCTRFD+ + +Q ++ S P Q ++ A +LRYLRG P +PI Y R ++ L ++D+S+ RSTTG +F
Sbjct: 614 LGTKFVFKKKLDGRFKARLAVGG--HRQEPGQDYRNAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATEEPMVYKLERSLYGLLQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLF 956
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Match: A0A6H5KS50_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS50_9PHAE) HSP 1 Score: 244 bits (624), Expect = 6.320e-72 Identity = 138/336 (41.07%), Postives = 197/336 (58.63%), Query Frame = 1
Query: 1 IGMPWVFKAKADGKFKARLVVQGWSHKHEIDCGSTFAPV*RLESQRLLLALATANNWTVYALDIQVAFLNGKLKESVFCKQAPGFEKMDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYSKGTN-DTYILLSLFVDDILVTGPTDKLLMGFRNQLMNKFTITDLGEVSLILGMEVLRNKQTGTLQLSQHTYVLSFLDRFNMPSANPTKAPGIKTDPSTASNSASLLDAAATKEYQAMVGSLILLTQCTRFDICFNVIQAARFMSAPTQQHLVAVNRILRYLRGYPDIPITYSRSKVELVGYSDASYCT-----RSTTG 990
+G +VF K DG+FKARLVV G D G ++APV R+ S R+ A+ NNW +Y LD+ AFLN V+ + APG +S TG+P V L RS+ GL Q+P+LWN T+D L G+ T SDPCVY T+ +T ++L++ VDDIL+TG +L+ + +L N+F +TD+GEV ILG++V R+ + GTL +SQ V + L+RF M ANP G + ST L YQ+M GS++ + QCTRFD+ + + ++ S P Q ++ A +LRYLRG P +PI Y R + L ++D+S+ RSTTG
Sbjct: 332 LGTKFVFTKKLDGRFKARLVVGGHRQAPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVCLTSGNTIVILTVCVDDILITGGDQQLVDQPKKELTNRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHNVNTLLERFGMQEANPVSTSGYGAEISTNQPQDQFLGPMV-NFYQSMTGSILYVAQCTRFDLSYAALPLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIAYKRGQFRLAAFTDSSFGANPDNGRSTTG 666 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5685.13229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5685.13229.1 >prot_H-paniculata_contig5685.13229.1 ID=prot_H-paniculata_contig5685.13229.1|Name=mRNA_H-paniculata_contig5685.13229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp MDSTTGKPYVMSLTRSIDGLRQTPSLWNHTIDNELRSMGFTSTISDPCVYback to top mRNA from alignment at H-paniculata_contig5685:11538..12536- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5685.13229.1 ID=mRNA_H-paniculata_contig5685.13229.1|Name=mRNA_H-paniculata_contig5685.13229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=999bp|location=Sequence derived from alignment at H-paniculata_contig5685:11538..12536- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5685:11538..12536- >mRNA_H-paniculata_contig5685.13229.1 ID=mRNA_H-paniculata_contig5685.13229.1|Name=mRNA_H-paniculata_contig5685.13229.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at H-paniculata_contig5685:11538..12536- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |