prot_H-paniculata_contig5660.13195.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: D7FRC3_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRC3_ECTSI) HSP 1 Score: 211 bits (536), Expect = 3.210e-64 Identity = 123/176 (69.89%), Postives = 133/176 (75.57%), Query Frame = 0
Query: 5 RDRGRGSYGREDSRDRNDRRG----ASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRGYGRSXXXXXXXGYGGYAARRXXXXXXXXXXXXXXXXSPPRRRDRSDS 176
RDRGRG YGR+DSR R+ + PGKVSLLVRNLTFRTR +DVKRIF+DFGD+RDVYLPLDFGTQKPRGFAFVEFY+PG+A A+DRLDGYNLDGRNISVLYAQEKRKRP+EMV KER E R YGR XXXX GY GYAARR SPPRRR RS S
Sbjct: 3 RDRGRGGYGRDDSRGRDXXXXXXXXSGPGKVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDRLDGYNLDGRNISVLYAQEKRKRPDEMVHKERVEG-RGDYGRGRSXXXXRGYSGYAARRSR--------------SPPRRRSRSYS 163
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A7S2V1C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C3_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.710e-32 Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 0
Query: 28 PGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKE 121
P VSLLVRN+++RTR ED++ IFS +GDIRDVYLP+D+ +++PRGFAFVEFY+ +A AKD LD Y LD R I+V++AQ++RKRPEEM E
Sbjct: 25 PDGVSLLVRNISYRTRAEDLRYIFSKYGDIRDVYLPMDYHSKEPRGFAFVEFYDGRDAADAKDALDRYALDNRQIAVVFAQQRRKRPEEMAHTE 118
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A7S3HCI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCI8_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.300e-27 Identity = 62/132 (46.97%), Postives = 83/132 (62.88%), Query Frame = 0
Query: 6 DRGRGSYGREDSRDRNDR--------------------RGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEM 117
DRGR R +SRDRNDR R SLLVRNL++R R ++++RIF +GDIRDVY+P D+ TQ+PRGFAFVEFY+ +A A D LD Y +DGR I+V++A+++RK +EM
Sbjct: 3 DRGRA---RSNSRDRNDRGDSXXXXXXXRSDRDDKVSSRDGPEATTSLLVRNLSYRVRADEIRRIFVRYGDIRDVYIPQDYHTQRPRGFAFVEFYDRRDAADALDHLDRYEMDGREIAVVFAKDRRKTADEM 131
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A7S2BL32_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL32_9STRA) HSP 1 Score: 112 bits (280), Expect = 6.670e-27 Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 0
Query: 22 DRRGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERD 123
DR G+VSLLVRN+++ R ED+ F ++G+IRDVY+P+D+ +QKPRGFAFVEFY P +A A+ +LD ++ GR I V++AQ +RKRPEEM +R+
Sbjct: 18 DRPAGEDGQVSLLVRNISYDCRKEDLADRFREYGEIRDVYVPVDYYSQKPRGFAFVEFYNPDDAEEARVKLDKTDVHGREIQVMFAQNRRKRPEEMSTMDRN 119
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A6A4DL65_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DL65_9STRA) HSP 1 Score: 110 bits (274), Expect = 5.990e-26 Identity = 53/104 (50.96%), Postives = 78/104 (75.00%), Query Frame = 0
Query: 29 GKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRGYGR 132
G +SLLVRN++ R RPED+++ F +G++RDVY+P DF T++P+GFAFVEF EA A+ LDG +DGR+I V++AQE+RK ++M +ER++ +RG GR
Sbjct: 5 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREADDARRNLDGVRIDGRDIRVVFAQERRKSTDQM--REREKTEKRGGGR 106
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: W2JZ98_PHYPR (RRM domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2JZ98_PHYPR) HSP 1 Score: 109 bits (273), Expect = 2.230e-25 Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 0
Query: 29 GKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDE 124
G +SLLVRN++ R RPED+++ F +G++RDVY+P DF T++P+GFAFVEF EA A+ LDG +DGR+I V++AQE+RK E+M +ER E
Sbjct: 5 GGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRNLDGVRIDGRDIRVVFAQERRKSTEQMRERERTE 100
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A3F2S3V6_9STRA (RRM domain-containing protein (Fragment) n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3V6_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.420e-25 Identity = 50/99 (50.51%), Postives = 74/99 (74.75%), Query Frame = 0
Query: 31 VSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRG 129
+SLLVRN++ R RPED+++ F +G++RDVY+P D+ T++P+GFAFVEF EA A+ LDG +DGR+I V++AQE+RK ++M +E+ E PR G
Sbjct: 20 ISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFKSDREAEDARRNLDGVRIDGRDIRVVFAQERRKSTDQMREREKTEKPRGG 118
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A5A7R078_STRAF (SC35-like splicing factor 33 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R078_STRAF) HSP 1 Score: 108 bits (271), Expect = 3.990e-25 Identity = 57/116 (49.14%), Postives = 75/116 (64.66%), Query Frame = 0
Query: 7 RGRGSYGREDSRDRNDRRGASPGKVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKER 122
RG G GR R RG +P SLLVRNL RPED+KR FS FG ++D+YLP D+ T +PRGF FV++ EP +A AK +DG GR ++V++A+E RK+P EM +ER
Sbjct: 12 RGYGRRGRSPPRGGRHGRGDAP--TSLLVRNLRHDCRPEDLKRPFSQFGPVKDIYLPRDYYTNEPRGFGFVQYVEPADAADAKYHMDGQIFQGREVTVVFAEENRKKPTEMRARER 125
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: M4D602_BRARP (RRM domain-containing protein n=12 Tax=Brassica TaxID=3705 RepID=M4D602_BRARP) HSP 1 Score: 110 bits (275), Expect = 6.320e-25 Identity = 57/121 (47.11%), Postives = 78/121 (64.46%), Query Frame = 0
Query: 9 RGSYGREDSRDRNDRRGASPG-------KVSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKER 122
RGSYGR D R + R G G SLLVRNL R ED++R F FG ++D+Y+P D+ T PRGF FV+F +P +A AK ++DGY+L GR ++V++A+E RK+P EM +ER
Sbjct: 12 RGSYGRRDRRSPSPRGGGRYGGARSLDLPTSLLVRNLRHDCRQEDLRRSFEQFGPLKDIYMPRDYYTGDPRGFGFVQFVDPADAAEAKYQMDGYHLLGRELTVVFAEENRKKPTEMRARER 132
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Match: A0A8K1CUS2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUS2_PYTOL) HSP 1 Score: 108 bits (270), Expect = 6.870e-25 Identity = 54/103 (52.43%), Postives = 75/103 (72.82%), Query Frame = 0
Query: 31 VSLLVRNLTFRTRPEDVKRIFSDFGDIRDVYLPLDFGTQKPRGFAFVEFYEPGEAGRAKDRLDGYNLDGRNISVLYAQEKRKRPEEMVRKERDEPPRRGYGRS 133
+SLLVRNL+ R RP+D+++ F FGD+RDVY+P DF T++ +GFAFVEF +A A+ LDG LDGR I V++AQEKRK ++M ++R+ P+R GRS
Sbjct: 7 ISLLVRNLSRRMRPDDLRKEFEKFGDVRDVYIPKDFYTREAKGFAFVEFKTERDADEARHNLDGARLDGREIRVVFAQEKRKSSDQM--RDRERAPKRRGGRS 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5660.13195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5660.13195.1 ID=prot_H-paniculata_contig5660.13195.1|Name=mRNA_H-paniculata_contig5660.13195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bpback to top |