prot_H-paniculata_contig56160.13143.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56160.13143.1
Unique Nameprot_H-paniculata_contig56160.13143.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
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BLAST of mRNA_H-paniculata_contig56160.13143.1 vs. uniprot
Match: A0A2A9NB75_9AGAR (CCHC-type domain-containing protein (Fragment) n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NB75_9AGAR)

HSP 1 Score: 55.1 bits (131), Expect = 1.280e-6
Identity = 45/132 (34.09%), Postives = 58/132 (43.94%), Query Frame = 0 
Query:    1 CWVCGSSEHLARRCPK----RHRDTNKGTVALLATIKGPKAMIAVTDDRKTTDNPAVTREKEHWNSDTGATDHMTSDETAFEDYTPALLGTMCEIANGTFVPVEGWGRLVFRVSQPGGTSRVAVLNRVAHVP 128
            C+ C    H  RRCPK    R +  N    A  A      A  A T    ++D    T     WN+DTGAT HMT     F+DY    +    ++A+ + V  EG G +VFR +  G   R     RV HVP
Sbjct:   70 CYFCQEIGHTVRRCPKLKDKREQGGNASNKAERAEETTESAGHASTLCYTSSDTS--TNSDWSWNTDTGATSHMTPHRQWFKDYKHYRVPI--KLADNSVVYSEGVGNVVFRPNLNGKVGRDIEFTRVLHVP 197
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56160.13143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2A9NB75_9AGAR1.280e-634.09CCHC-type domain-containing protein (Fragment) n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1..16
score: 8.927

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56160contigH-paniculata_contig56160:695..1078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56160.13143.1mRNA_H-paniculata_contig56160.13143.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56160 695..1078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56160.13143.1 ID=prot_H-paniculata_contig56160.13143.1|Name=mRNA_H-paniculata_contig56160.13143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
CWVCGSSEHLARRCPKRHRDTNKGTVALLATIKGPKAMIAVTDDRKTTDN
PAVTREKEHWNSDTGATDHMTSDETAFEDYTPALLGTMCEIANGTFVPVE
GWGRLVFRVSQPGGTSRVAVLNRVAHVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC