prot_H-paniculata_contig56149.13140.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig56149.13140.1
Unique Nameprot_H-paniculata_contig56149.13140.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A6B7EXG5_9PHAE (50S ribosomal protein L29 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXG5_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.670e-32
Identity = 60/68 (88.24%), Postives = 67/68 (98.53%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSDKQRLE 68
            MSLPKIDE+ISLT+ ELEDEILNVKKELF+LR+RRGTKQSFKSHQIKHSKHRLSQLLMI+KS+KQ+LE
Sbjct:    1 MSLPKIDEVISLTNRELEDEILNVKKELFKLRLRRGTKQSFKSHQIKHSKHRLSQLLMIRKSNKQKLE 68          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A7T8JK69_SCYLO (50S ribosomal protein L29, chloroplastic n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8JK69_SCYLO)

HSP 1 Score: 105 bits (261), Expect = 2.230e-28
Identity = 56/64 (87.50%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSDK 64
            MSLPKIDEI  LT  ELEDEILNVKKELFRLR+RRGTKQSFKSHQIKHSKHRL+QLLMIK S K
Sbjct:    1 MSLPKIDEITMLTQGELEDEILNVKKELFRLRLRRGTKQSFKSHQIKHSKHRLAQLLMIKNSQK 64          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: D1J744_ECTSI (50S ribosomal protein L29, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J744_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 7.490e-27
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSD 63
            MSLPKIDEI  L+ SELEDEI NVKKELFRLR+RRGTKQSFKSHQ+KHSKHRL+QLLMIK  D
Sbjct:    1 MSLPKIDEITMLSKSELEDEIFNVKKELFRLRLRRGTKQSFKSHQLKHSKHRLAQLLMIKNRD 63          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A1I9LVL3_9PHAE (50S ribosomal protein L29, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVL3_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.260e-24
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQS--FKSHQIKHSKHRLSQLLMIKKS 62
            MSLPKI+EII L+ SELEDEILNVKKELF+LR+RRGTKQ   FKSHQ KHSKHRL+QLLMI+KS
Sbjct:    1 MSLPKINEIIMLSQSELEDEILNVKKELFKLRLRRGTKQKQFFKSHQFKHSKHRLAQLLMIQKS 64          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A8F0F7Y7_9PHAE (Ribosomal protein L29 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Y7_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 5.780e-24
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSD 63
            MSLPKIDEI +L   +LE+EILN+KKELF+LR+RRG KQSFKSHQ KH KHRL+QLLMIKKS+
Sbjct:    1 MSLPKIDEIKNLNKDDLENEILNIKKELFKLRLRRGAKQSFKSHQFKHGKHRLAQLLMIKKSN 63          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A5B9RGZ9_9PHAE (50S ribosomal protein L29, chloroplastic n=23 Tax=Laminariales TaxID=2886 RepID=A0A5B9RGZ9_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 6.760e-23
Identity = 46/63 (73.02%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSD 63
            MSLPKID+I +L  +ELE+EILN+KK+LF+LR+RRG KQSFKSHQ KH KHRL+QLLMI+KS+
Sbjct:    1 MSLPKIDDIKNLDKNELENEILNIKKQLFKLRLRRGAKQSFKSHQFKHGKHRLAQLLMIQKSN 63          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A8F0F9N7_9PHAE (Ribosomal protein L29 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9N7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 8.760e-22
Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKS 62
            MSLPK+DEI +L   ELE+EILN+K +LF+LR+RRG KQSFKSHQ KH KHRL+QLLMIKK+
Sbjct:    1 MSLPKMDEIKTLKKDELENEILNIKTQLFKLRLRRGAKQSFKSHQFKHGKHRLAQLLMIKKA 62          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A8F0FB43_9PHAE (Ribosomal protein L29 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB43_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 9.230e-21
Identity = 44/63 (69.84%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSD 63
            MSLPKI EI +LT+++LE+EIL++KK+LF+LR+ R TKQSFKSHQ KH+KHRL QLLMI+KS+
Sbjct:    1 MSLPKIAEIQTLTNTDLENEILSIKKQLFKLRLCRATKQSFKSHQFKHAKHRLGQLLMIQKSN 63          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A2R4QQ56_9PHAE (50S ribosomal protein L29 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ56_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.650e-20
Identity = 44/62 (70.97%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKS 62
            MSLP I+EI SL  +ELE+EILN+KKELF+LR  RG KQ+FKSHQIKH KHRL+QLLMI+++
Sbjct:    1 MSLPNINEIQSLNINELENEILNIKKELFKLRFYRGNKQAFKSHQIKHQKHRLAQLLMIRQN 62          
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Match: A0A6B9TQJ7_SARFS (50S ribosomal protein L29, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A6B9TQJ7_SARFS)

HSP 1 Score: 82.4 bits (202), Expect = 2.180e-19
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    1 MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSKHRLSQLLMIKKSD 63
            MSLPK+DEI +L  +ELE+EILN+KKELF+LR  R  KQSFKSHQ KH KHRL+QLLM  +S+
Sbjct:    1 MSLPKMDEIQNLNKNELENEILNIKKELFKLRFSRANKQSFKSHQFKHQKHRLAQLLMKHQSN 63          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56149.13140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B7EXG5_9PHAE2.670e-3288.2450S ribosomal protein L29 n=1 Tax=Cladosiphon okam... [more]
A0A7T8JK69_SCYLO2.230e-2887.5050S ribosomal protein L29, chloroplastic n=4 Tax=S... [more]
D1J744_ECTSI7.490e-2784.1350S ribosomal protein L29, chloroplastic n=2 Tax=E... [more]
A0A1I9LVL3_9PHAE3.260e-2481.2550S ribosomal protein L29, chloroplastic n=1 Tax=P... [more]
A0A8F0F7Y7_9PHAE5.780e-2476.19Ribosomal protein L29 n=2 Tax=Laminariales TaxID=2... [more]
A0A5B9RGZ9_9PHAE6.760e-2373.0250S ribosomal protein L29, chloroplastic n=23 Tax=... [more]
A0A8F0F9N7_9PHAE8.760e-2272.58Ribosomal protein L29 n=1 Tax=Chorda asiatica TaxI... [more]
A0A8F0FB43_9PHAE9.230e-2169.84Ribosomal protein L29 n=1 Tax=Desmarestia aculeata... [more]
A0A2R4QQ56_9PHAE2.650e-2070.9750S ribosomal protein L29 n=3 Tax=Fucaceae TaxID=3... [more]
A0A6B9TQJ7_SARFS2.180e-1968.2550S ribosomal protein L29, chloroplastic n=13 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001854Ribosomal protein L29/L35TIGRFAMTIGR00012TIGR00012coord: 8..61
e-value: 1.5E-11
score: 42.2
IPR001854Ribosomal protein L29/L35PFAMPF00831Ribosomal_L29coord: 8..60
e-value: 1.5E-10
score: 40.9
IPR001854Ribosomal protein L29/L35HAMAPMF_00374Ribosomal_L29coord: 3..63
score: 11.298
NoneNo IPR availableGENE3D1.10.287.310coord: 5..67
e-value: 9.9E-10
score: 40.0
IPR003447FemABX peptidyl transferasePROSITEPS51191FEMABXcoord: 1..68
score: 9.103
IPR036049Ribosomal protein L29/L35 superfamilySUPERFAMILY46561Ribosomal protein L29 (L29p)coord: 4..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig56149contigH-paniculata_contig56149:416..622 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig56149.13140.1mRNA_H-paniculata_contig56149.13140.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig56149 416..622 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig56149.13140.1 ID=prot_H-paniculata_contig56149.13140.1|Name=mRNA_H-paniculata_contig56149.13140.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
MSLPKIDEIISLTDSELEDEILNVKKELFRLRVRRGTKQSFKSHQIKHSK
HRLSQLLMIKKSDKQRLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001854Ribosomal_L29/L35
IPR003447FEMABX
IPR036049Ribosomal_L29/L35_sf