prot_H-paniculata_contig56043.13125.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 160 bits (406), Expect = 5.890e-42 Identity = 90/217 (41.47%), Postives = 121/217 (55.76%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGRREKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAA---------------GNSSEYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RL++SLYGLKQ+ R WNK+LD L G+G +R +++CLY RD+ G+ LVV D L+ A R +DE K ++ +F+M DLG S +LGI +RRDRP I +SQ YI VL RYG +C+ TP A K +A G S Y ++GS+MY GTRPD AY+V R +P R + KR RYL D+ + F
Sbjct: 1125 RLKRSLYGLKQAGRTWNKTLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLVVYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRF 1341
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.280e-41 Identity = 84/207 (40.58%), Postives = 123/207 (59.42%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGR-REKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNS----SEYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RLRKSLYGLKQS RNW+K +D + G GL S D CLY + GE L++V+Y D+L+I R D+FK +IS+ F M+DL L +LG+ ++R+R N T+ ISQ YI +L ++G +C+ V TP + K G +EY +VGSL+Y + TRPD A+ V + ++ +E + KR+ RYL D+G+ +
Sbjct: 340 RLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKY 545
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.520e-41 Identity = 86/207 (41.55%), Postives = 122/207 (58.94%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGR-REKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNSS----EYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RLRKSLYGLKQS RNW+K +D + G G S+ D CLY + GE L++V+Y D+L+I RE VD+FK IS+ F M+DL L +LG+ ++R+R + ISQ +YI VL ++G +CR V TP + K G + EY +VGSL+Y + TRPD A+ V + ++ E + KR+ RYL D+GI +
Sbjct: 349 RLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGTLTKMDGKDAKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRY 554
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: A0A2G2W4T7_CAPBA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W4T7_CAPBA) HSP 1 Score: 157 bits (398), Expect = 6.990e-41 Identity = 83/215 (38.60%), Postives = 126/215 (58.60%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGR-REKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNSSE------------YRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RL+KSLYGLKQS R W K D F+ G G RS+ D+C+YF + + G + +++Y D+++IA R + VD+ K ++ F M+DLG ++LG+E+ RDR G + +SQ Y+ ++L R+G +C+ V TP A +K ++ + Y VGSLMY TRPD AY V +R M +P ++ + + K I RYL PD+G+ F
Sbjct: 616 RLKKSLYGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSL-VYLLLYVDDMLIAARDKTLVDKLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGMRDCKAVNTPLAAHFKLSSDQCPQSEEEQRRMSHVPYSNAVGSLMYAMVCTRPDLAYAVSVVSRFMHNPGKQHWESVKWILRYLKGSPDIGLVF 829
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL) HSP 1 Score: 153 bits (386), Expect = 1.800e-40 Identity = 86/215 (40.00%), Postives = 126/215 (58.60%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVI-AGRREKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTP----AKAKYKK--------AAGNSSEYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RL+KSLYGL QS R WN+ D + IGL ++ D+C+Y+ R+ GE + V V+ D+L+I A +++ + K + F M+DLG +++GIEV RDR GT+T+SQ YI +L RYGF + GV TP A K ++ A +EY+ M+G LMY + TRPD AY V + ++ +P E + CKR+F YLS D G+ +
Sbjct: 118 RLKKSLYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYY-RERDGE-RVWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFHYLSGTRDYGLVY 330
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: A0A178VBX6_ARATH (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178VBX6_ARATH) HSP 1 Score: 150 bits (379), Expect = 3.200e-40 Identity = 77/204 (37.75%), Postives = 120/204 (58.82%), Query Frame = 0
Query: 7 LRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAG-RREKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNSSEYR------------GMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYL 197
L++SLYGLKQS R WN D+F+ GI RS DSC+YF + NG +T + +++Y D+++IA + +V+E K +S+ F M+DLG ++LG+E+ RDR G +T+SQ Y+++VL+ + D + V TP +K A EY +GS+MY+ GTRPD AY + +R M P ++ + K + RY+
Sbjct: 47 LKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNG-DTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRGAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYM 249
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: H3H910_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H910_PHYRM) HSP 1 Score: 147 bits (371), Expect = 3.530e-40 Identity = 75/215 (34.88%), Postives = 118/215 (54.88%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGRREKV-DEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNSSE------------YRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
+L++SLYGLKQS R WN+++DDF++ +G + +D C+Y RD G+ + V +Y D+LV+A +++ + KH + KRF M DLG L LG+E++ D +G +T+ Q +++ +L ++G + + V TP K + YR VG+LMY TRPD A V ++ DPC + KR+ RYL P G+ F
Sbjct: 18 KLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALCKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEDGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEF 230
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.690e-40 Identity = 82/207 (39.61%), Postives = 121/207 (58.45%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGR-REKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNS----SEYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RLRKSLYGLKQS RNW+K +D + G G S+ D CLY + GE L++V+Y D+L+I RE V +FKH IS+ F M+DL L +LG+ ++RDR + ISQ +YI +L ++ +C+ V TP + K G +EY +VGSL+Y + TRPD A+ V + ++ E + KR+ RYL ++G+ +
Sbjct: 120 RLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGTLTKMDGKDVKPDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKY 325
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 153 bits (387), Expect = 5.530e-40 Identity = 79/197 (40.10%), Postives = 126/197 (63.96%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGRR-EKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNSS----EYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYL 197
RL+KSLYGLKQS RNWN+ LD++L+ G R+ D C+Y + GE ++VV++ D+L+IA +K+ +FK N+ +FRM+DLG +S LGI ++ NG I ++Q YI+++L R+G +C+ TP + +++ + + YR +VGSL+Y T TRPD ++VV + ++++ P ED T K + RYL
Sbjct: 315 RLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVY--QKQTGEDIIIVVIWVDDLIIASSNTDKISQFKENMKSKFRMKDLGEISYFLGISFKQG--NGVIKMNQKRYIQKILDRFGMSDCKPRTTPCEQRFEGMSDSEQVDPRRYREIVGSLIYLMTCTRPDISWVVSKLSQKLSCPRLEDLVTAKHVLRYL 507
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.060e-39 Identity = 85/207 (41.06%), Postives = 120/207 (57.97%), Query Frame = 0
Query: 6 RLRKSLYGLKQSCRNWNKSLDDFLVGIGLDRSTTDSCLYFSRDNGGETNLLVVVYFDNLVIAGR-REKVDEFKHNISKRFRMEDLGSLSRVLGIEVRRDRPNGTITISQGSYIREVLKRYGFDECRGVPTPAKAKYKKAAGNS----SEYRGMVGSLMYTSTGTRPDRAYVVHQAARRMEDPCREDFSTCKRIFRYLSTVPDLGITF 207
RLRKSLYGLKQS RNW+K +D + G G S+ D CLY + GE L+VV+Y D+L+IA R D+FK IS+ F M+DL L +LG+ ++R+R + ISQ YI +L ++G +C+ V TP + K G SEY +VGSL+Y + TRPD A+ V + ++ E + KR+ RYL D+GI +
Sbjct: 638 RLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLIIASNSRTMADKFKQAISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKPDSEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRY 843 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig56043.13125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig56043.13125.1 ID=prot_H-paniculata_contig56043.13125.1|Name=mRNA_H-paniculata_contig56043.13125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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