mRNA_H-paniculata_contig5562.13063.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 343 bits (879), Expect = 6.990e-106 Identity = 187/308 (60.71%), Postives = 220/308 (71.43%), Query Frame = 1
Query: 13 PQGPAPSXXXXXXXGSLTQVVLKFTTVPDDGDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDGAFHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKIDEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTIS---IADRELSRHHSRLECQEG--SMYISG------GSSVTGASDD-----------------------DGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQVM 834
P G APS GSL++V+LKFTTV D +A SF TV REGATVGRG NDICIP+D+CMGES+HASIVW++GAFHV+DRG YGASVRIG G G+R+WPL G++FSAGNSVF +IDE+ GMLLEIVAGPLKGQKRRV + GA +GRATE+TI IADRELSR+HS +EC + S+ SG G + G DD G+ E++LCDVGSTNGT+VQ LVGPYA+SRRL+LSD ILIGRTGFSINR+DWG WEDRG+RR+MEDKSVVIQ M
Sbjct: 313 PAGAAPSAP-----GSLSEVILKFTTVADGNEASSF-TVKREGATVGRGSCNDICIPNDSCMGESEHASIVWREGAFHVEDRGLPYGASVRIGTGRGVRDWPLDQGAMFSAGNSVFHTTEIDEDKGMLLEIVAGPLKGQKRRVQKDGANIGRATESTIRHIIIADRELSRNHSTIECDDNARSLCSSGWASSGDGGADAGGGDDRRSAEAKKDGMLDLSTAESVDGKSGQGEAGGGRTEFYLCDVGSTNGTYVQ-LVGPYANSRRLQLSDHILIGRTGFSINRYDWGVWEDRGARRSMEDKSVVIQDM 613
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S0XEJ1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEJ1_9STRA) HSP 1 Score: 219 bits (559), Expect = 9.820e-64 Identity = 123/259 (47.49%), Postives = 168/259 (64.86%), Query Frame = 1
Query: 58 SLTQVVLKFTTVPDD-GDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDGAFHVQDRGYRYGASVRIGKGTGLR-EWPLRVGSVFSAGNSVFQIRKIDEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQ 828
+L ++VLKFTTV + +APSF TV +GA +G G N+I IPSD + + HA+I + G+F++ D GY AS+RIG GTG R W L + FSAGNSVF IDE+ ++L+++ GPLK +KR V + GA+ GR++ENTIS+ DRELSR HSRLE ++R++K Y +CDVGSTNGT++Q LVGPYA +L L+D IL+GRTGFS+NR+D+G E+ G R MED ++Q
Sbjct: 89 TLNKIVLKFTTVSESCNEAPSF-TVSTKGANIGSGSTNEIYIPSDLRLNKDAHATINYSKGSFYICDNGYDNPASIRIGVGTGHRMTWYLENNARFSAGNSVFCSEGIDEDGNLVLKVLEGPLKNEKRVVTKRGASFGRSSENTISVPDRELSRKHSRLEY---------------------DQRVNK----YLVCDVGSTNGTYMQ-LVGPYAGPFKLSLTDHILVGRTGFSVNRYDYGLSEEIGFRPTMEDACTIVQ 320
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S1UBQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ7_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.640e-61 Identity = 115/258 (44.57%), Postives = 165/258 (63.95%), Query Frame = 1
Query: 61 LTQVVLKFTTVPDDGDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDG--AFHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKIDEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQ 828
L ++VLKFTT+ + +AP+F VG GA++GR P N++ +P+DA + HA I ++ AF+++D G+ +GA++RI G+GLR+W L+ +VFSAGNS F++ D +LLE+ +GPLKG++RRV GAT+GR N SI D+ELSR H +E + DD +++CDVGSTNGT++ LVGPY RL LSD IL+GRTGFS+NR+D+G E+ G R++MED V+IQ
Sbjct: 168 LEEIVLKFTTLSEGNEAPAFL-VGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCDASS-VLLEVGSGPLKGERRRVGEKGATLGRHNNNEFSIPDKELSRRHCCIEFEP--------------KDD-----------SFYICDVGSTNGTYMH-LVGPYRGLWRLSLSDHILVGRTGFSVNRYDFGVSEEMGRRQSMEDAHVLIQ 397
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S1XX31_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX31_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.540e-59 Identity = 115/258 (44.57%), Postives = 165/258 (63.95%), Query Frame = 1
Query: 61 LTQVVLKFTTVPDDGDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDG--AFHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKIDEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQ 828
L ++VLKFTT+ + +AP+F VG GA++GR P N++ +P+DA + HA I ++ AF+++D G+ +GA++RI G+GLR+W L+ +VFSAGNS F++ D +LLE+ +GPLKG++RRV GAT+GR N SI D+ELSR H +E + DD +++CDVGSTNGT++ LVGPY RL LSD IL+GRTGFS+NR+D+G E+ G R++MED V+IQ
Sbjct: 168 LEEIVLKFTTLSEGNEAPAFL-VGMGGASIGRDPTNEVSVPTDATLEPERHAVIEYRADRQAFYLRDMGHDHGAAIRIEAGSGLRQWRLQENAVFSAGNSSFKVVTCDASS-VLLEVGSGPLKGERRRVGEKGATLGRHNNNEFSIPDKELSRRHCCIEFEP--------------KDD-----------SFYICDVGSTNGTYMH-LVGPYRGLWRLSLSDHILVGRTGFSVNRYDFGVSEEMGRRQSMEDAHVLIQ 397
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: W7U755_9STRA (Protein phosphatase 1b2 53 kDa isoform n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U755_9STRA) HSP 1 Score: 208 bits (530), Expect = 9.730e-58 Identity = 108/256 (42.19%), Postives = 165/256 (64.45%), Query Frame = 1
Query: 61 LTQVVLKFTTVPDDGDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDGAFHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKIDEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQ 828
+ +++LKFTT D + S F +G+ G ++GR N + +PSD+ + E HA I ++ G+F++++ G + A++R+G +R+WPL G+ FSAGNS+F + +I + M+ E++ GPLKG++ V + GAT+GR+ +NT+SIAD ELSR HSR+E +E + +Y+L DVGSTNGT++Q L GPYA + L L D I++GRTGFSINR+D+G E+RG R+ MED ++VIQ
Sbjct: 491 VDKLILKFTTYSQDKEH-SAFVIGKGGGSIGRDVKNTVSVPSDSTLQEDSHAFIGFKAGSFYIKNLGVTHCAAIRVGAEPVVRDWPLVRGATFSAGNSIFLVVEITPTE-MVAEVIDGPLKGERLEVSQKGATLGRSPDNTLSIADPELSRRHSRIEYEE-------------------------KDGKYYLSDVGSTNGTYMQ-LAGPYAKAYNLSLGDEIMVGRTGFSINRYDYGISEERGRRKTMEDHTLVIQ 718
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.260e-57 Identity = 108/261 (41.38%), Postives = 158/261 (60.54%), Query Frame = 1
Query: 61 LTQVVLKFTTVPDDGDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDGAFHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKID--EEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLE-CQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQVM 834
+ ++VLKFTT+ DG+ + F + G T+GRG N +C+PSD + + HA + + +G F + D Y A+VR+G G + WPL + FS+GNS+F++ ++ + L + GP KG+ V + GAT+GRAT+NT+ I DRELSR HSR+ +EG + +++ D+GSTNGT+VQ LVGPYA L L+D IL+GRTGFS+NRFD+G E+ G RR+MEDKS+++Q M
Sbjct: 1 VDRLVLKFTTL-SDGNEKASFCLDARGGTIGRGLENHVCVPSDTTLAKLRHACVEYSNGEFQLVDTSSDYHAAVRVGVGRAAQAWPLTKTAAFSSGNSIFEVVDVELHPTPAVSLAVRTGPRKGETLVVGKDGATLGRATDNTVCIPDRELSRRHSRVSFSKEGDVP------------------------SFYISDLGSTNGTYVQ-LVGPYAGRYPLHLNDHILVGRTGFSVNRFDFGISEETGMRRSMEDKSIMVQDM 235
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S2GBR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GBR9_9STRA) HSP 1 Score: 200 bits (509), Expect = 3.650e-57 Identity = 113/264 (42.80%), Postives = 158/264 (59.85%), Query Frame = 1
Query: 58 SLTQVVLKFTTVPDDGDAPSFFTVGREGATVGRGPGNDICIPSDACMGESDHASIVWQDGAFHVQDRGYR-YGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKIDEEDG--MLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRL--ECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQVM 834
S+T++VLKFTT+ DG + F V + G T+GR P N+I +PSD + + HASI DGAF + D Y A+VR+G G W L + FSAGNS+FQ+ + + D + + ++ GP K + V R GAT+GRAT NT+ I+DRELSR HS++ + +G+ Y+S D+GSTNGT+VQ LVGPYA L ++D IL+GRTGFSINR+D+ E+ G R+ MEDKS+++Q M
Sbjct: 11 SVTKLVLKFTTL-SDGSEKASFCVDQRGGTIGRSPDNNISVPSDMTLAKVRHASIEHSDGAFELVDANTNEYHAAVRVGVGRSASAWLLAKDAAFSAGNSIFQVMDVQQGDNPRLTVTVLTGPRKNETLCVTRQGATLGRATVNTVCISDRELSRRHSKVSYDAVDGNFYVS---------------------------DLGSTNGTYVQ-LVGPYAGRYPLHVNDHILVGRTGFSINRYDFAVSEEMGMRKTMEDKSIMVQDM 245
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S3YCX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCX7_HETAK) HSP 1 Score: 167 bits (424), Expect = 2.620e-48 Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 1
Query: 241 FHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKID---EEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQ 828
FH+ D G GA+V+IGKG REWPL V S FSAGNSV + D +E + L I GPLKG++R++ + GA +GRATEN +SI DRELSR HS + R +++LCDVGSTNGT++Q LVGPY RL L D +L+GRT FS+NRFD+G E+ G RR MED+ + Q
Sbjct: 6 FHLHDLGQPLGAAVQIGKGIEDREWPLIVNSAFSAGNSVLVVESADLNGDEPMIWLRIEEGPLKGERRKITKEGAALGRATENALSIPDRELSRRHSLIV-------------------------HDPRRRQFYLCDVGSTNGTYMQ-LVGPYGRPYRLSLQDNVLVGRTCFSVNRFDYGLSEEIGMRRTMEDRYTLEQ 178
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7S4DEC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 149 bits (376), Expect = 1.600e-39 Identity = 80/151 (52.98%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 376 DEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLECQEGSMYISGGSSVTGASDDDGEERLSKRHVEYFLCDVGSTNGTFVQQLVGPYASSRRLELSDRILIGRTGFSINRFDWGAWEDRGSRRAMEDKSVVIQ 828
D E + LE+ +GPL+G++RRV R GA +GRAT+N IS+AD+ELSR HS +E G GA YFLCDVGSTNGT++Q LVGPYA+S +L SD IL+GRTGFSINRFD+G E+ G R MEDKS++IQ
Sbjct: 4 DAEPALFLEVTSGPLRGERRRVGREGAALGRATDNAISVADKELSRRHSLVEYDRG----------RGA---------------YFLCDVGSTNGTYMQ-LVGPYANSYKLTFSDHILVGRTGFSINRFDYGVSEEIGRRPNMEDKSIIIQ 128
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Match: A0A7R9U1S5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1S5_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.140e-38 Identity = 68/133 (51.13%), Postives = 100/133 (75.19%), Query Frame = 1
Query: 139 GATVGRGPGNDICIPSDACMGESDHASIVWQDG--AFHVQDRGYRYGASVRIGKGTGLREWPLRVGSVFSAGNSVFQIRKIDEEDGMLLEIVAGPLKGQKRRVHRGGATVGRATENTISIADRELSRHHSRLE 531
GA++GRGP N++ +P+D + HA IV++ AF+++D G +GA+VRI GTGLR+W L ++FSAGNS F++ + D+ G+L+E+ AGPLKG++RRV + GA++GRAT+N +SI DRELSR HSR+E
Sbjct: 2 GASIGRGPANEVAVPTDTTLEADKHAMIVYKHDRKAFYLKDMGLEHGAAVRIEAGTGLRQWRLSENALFSAGNSSFKVVESDDT-GVLIEVGAGPLKGERRRVTQKGASLGRATDNVLSIGDRELSRRHSRIE 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5562.13063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5562.13063.1 >prot_H-paniculata_contig5562.13063.1 ID=prot_H-paniculata_contig5562.13063.1|Name=mRNA_H-paniculata_contig5562.13063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp AAAPPQGPAPSAPAPTAPGSLTQVVLKFTTVPDDGDAPSFFTVGREGATVback to top mRNA from alignment at H-paniculata_contig5562:9504..13526+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5562.13063.1 ID=mRNA_H-paniculata_contig5562.13063.1|Name=mRNA_H-paniculata_contig5562.13063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4023bp|location=Sequence derived from alignment at H-paniculata_contig5562:9504..13526+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5562:9504..13526+ >mRNA_H-paniculata_contig5562.13063.1 ID=mRNA_H-paniculata_contig5562.13063.1|Name=mRNA_H-paniculata_contig5562.13063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1668bp|location=Sequence derived from alignment at H-paniculata_contig5562:9504..13526+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |