prot_H-paniculata_contig55487.13043.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig55487.13043.1
Unique Nameprot_H-paniculata_contig55487.13043.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A8F0K092_9PHAE (Ribosomal protein L16 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K092_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.950e-83
Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYKQ 135
            MQPKK+KY+KYYKPRQLPKALTQTHKLKPISSL LVA +SAYLN RQIEAARQGIRRKIKRQGRLKIHLFTDIG+SHKSSASRMGKGKGK+NHWVGGLSAGQT+FKLTGIP+KEGISALKCGANKLPLKLQIYKQ
Sbjct:    1 MQPKKSKYKKYYKPRQLPKALTQTHKLKPISSLTLVASQSAYLNNRQIEAARQGIRRKIKRQGRLKIHLFTDIGISHKSSASRMGKGKGKINHWVGGLSAGQTLFKLTGIPLKEGISALKCGANKLPLKLQIYKQ 135          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A4Y5T7U0_9PHAE (Ribosomal protein L16 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7U0_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 7.500e-56
Identity = 90/132 (68.18%), Postives = 112/132 (84.85%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQI 132
            MQP KTKYRKYYKPRQ+PK   +   LKP S L L++LES Y+NGRQIEAARQ IRRKIKR+GRLKI +F DIG+S KS++SRMGKGKGK++HWVG +SAG+TIF+L G+P+K+GI ALK G+NK P+K++I
Sbjct:    1 MQPLKTKYRKYYKPRQVPKINPKLLTLKPHSHLSLISLESTYVNGRQIEAARQTIRRKIKRRGRLKIMIFPDIGISKKSTSSRMGKGKGKIDHWVGKISAGKTIFQLIGVPVKDGIPALKSGSNKFPIKVKI 132          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: V9PA30_UNDPI (Ribosomal protein L16 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=V9PA30_UNDPI)

HSP 1 Score: 178 bits (451), Expect = 3.250e-55
Identity = 88/134 (65.67%), Postives = 110/134 (82.09%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            +QPKKTKYRKY+KPR LP   T+THKLK I+   +  LES YLNGRQIEAARQ IRRK+KR+G+L+I +F DI +S K+SA+RMGKGKGKVNHW+  +SAGQT+F L GI +++GI AL  GANKLPLK++IY+
Sbjct:    3 IQPKKTKYRKYFKPRGLPNTSTKTHKLKEITCFAVTTLESGYLNGRQIEAARQSIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVNHWITSISAGQTLFLLYGIGVEQGIPALHSGANKLPLKVKIYQ 136          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A089N0Z2_PETFA (Ribosomal protein L16 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089N0Z2_PETFA)

HSP 1 Score: 176 bits (447), Expect = 1.320e-54
Identity = 86/134 (64.18%), Postives = 113/134 (84.33%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            +QPKKTKYRKY+KPR LPK+ T+T KLK ++   L+A+ES +LNG+QIEAARQ IRRK+KR+G+L+I +F DI +S K+SA+RMGKGKGKV+HWV  LSAG+T+F L G+  ++GI AL+ GANKLP+KL+IYK
Sbjct:    3 IQPKKTKYRKYFKPRGLPKSSTKTQKLKELNYFALIAMESGFLNGKQIEAARQNIRRKVKREGKLEILVFPDIAISRKASAARMGKGKGKVDHWVAALSAGRTVFLLYGVDAEQGIPALRSGANKLPMKLKIYK 136          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A1I9LW99_9PHAE (Ribosomal protein L16 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW99_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 5.360e-54
Identity = 85/133 (63.91%), Postives = 112/133 (84.21%), Query Frame = 0
Query:    2 QPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            QPKKTKYRKY+KPRQ+P   T+THKL+ ++   LVA+ES++LNG+QIEAARQ IRRK+ R+G+L+I +F DI +S K++A+RMGKGKGKV+HWV  LSAGQT+F L GI  ++GI AL+ GANKLP+KL+IY+
Sbjct:    4 QPKKTKYRKYFKPRQMPNNSTKTHKLQDLNCFALVAMESSFLNGKQIEAARQNIRRKVNRKGKLEIIIFPDIAISRKATAARMGKGKGKVDHWVASLSAGQTVFLLYGIDAEQGIPALQAGANKLPMKLKIYQ 136          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A4D6E560_9PHAE (Ribosomal protein L16 n=4 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E560_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 7.610e-54
Identity = 85/134 (63.43%), Postives = 110/134 (82.09%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            +QPKKTKYRKY+KPR LP   T+THKL  ++   L+A+ES+YLN RQIEAARQ IRRK+KR+G+L+I +F DI +S K+SA+RMGKGKGKVNHW+  ++AGQT+F L GI  ++GI AL  GANKLPLK++IY+
Sbjct:    3 IQPKKTKYRKYFKPRGLPNTSTKTHKLTELTCFALIAMESSYLNSRQIEAARQNIRRKVKREGKLEILVFPDIAISRKASAARMGKGKGKVNHWIASITAGQTVFLLYGIDAEQGIPALHSGANKLPLKVKIYQ 136          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: W5RG04_COSCS (Ribosomal protein L16 n=1 Tax=Costaria costata TaxID=2872 RepID=W5RG04_COSCS)

HSP 1 Score: 174 bits (441), Expect = 1.010e-53
Identity = 84/134 (62.69%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            MQPKKTKYRKY+KPR LP   T+THKL  ++   ++ LES Y+NGRQIEAARQ IRRK+KR+G+L+I +F DI +S K+SA+RMGKGKGKV+HWV  +SAGQT+F L G+  ++GI AL  GANKLP+K++IY+
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSTKTHKLSELTCFAVITLESGYVNGRQIEAARQNIRRKVKREGKLQISIFPDIAISRKASAARMGKGKGKVDHWVTSISAGQTLFTLFGVSAEQGIPALHSGANKLPIKVKIYQ 134          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: D0IPU3_SACAN (Ribosomal protein L16 n=6 Tax=Laminariales TaxID=2886 RepID=D0IPU3_SACAN)

HSP 1 Score: 172 bits (437), Expect = 4.120e-53
Identity = 84/134 (62.69%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            MQPKKTKYRKY+KPR LP    +THKL  ++   ++A+ S YLNGRQIE+ARQ IRRK+KR+G+L+I +F DI +SHK+SA+RMGKGKGKV+HW+  +SAGQT+F L GI  ++GI AL  GANKLPLK++IY+
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSGKTHKLTELTCFAVIAMGSGYLNGRQIESARQNIRRKVKREGKLEILIFPDIAISHKASAARMGKGKGKVDHWIASISAGQTLFLLYGIDAEQGIPALHSGANKLPLKVKIYQ 134          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A0U2M402_9PHAE (Ribosomal protein L16 n=18 Tax=Laminariales TaxID=2886 RepID=A0A0U2M402_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 8.310e-53
Identity = 84/134 (62.69%), Postives = 108/134 (80.60%), Query Frame = 0
Query:    1 MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            MQPKKTKYRKY+KPR LP   T+THKL  ++   ++ +ES YLNGRQIEAARQ IRRK+KR+G+L+I +F DI +S K+SA+RMGKGKGKV+HW+  +SAGQ +F L GI  ++GI AL  GANKLPLK++IY+
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSTKTHKLTELNCFAVILMESGYLNGRQIEAARQNIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVDHWIASVSAGQNLFLLYGIDAEQGIPALHSGANKLPLKVKIYQ 134          
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Match: A0A3G5FPM2_9PHAE (Ribosomal protein L16 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPM2_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 8.850e-53
Identity = 84/133 (63.16%), Postives = 110/133 (82.71%), Query Frame = 0
Query:    2 QPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEAARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSAGQTIFKLTGIPIKEGISALKCGANKLPLKLQIYK 134
            QPKKTKYRKY+KPR+ P  L QTHKL+ ++   L+A+ES +LNGRQIEAARQ IRRK+KR+G+L+I +F DI +S K+SA+RMGKGKGKV+HWV  + AG+TIF L GI  ++G+ AL+ GANKLP+KL+IY+
Sbjct:    4 QPKKTKYRKYFKPRRGPGNLNQTHKLEELNFFALIAMESGFLNGRQIEAARQNIRRKVKREGKLEIKVFPDIAISRKASAARMGKGKGKVDHWVSSIPAGKTIFTLYGIEAEQGVPALQSGANKLPIKLKIYQ 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig55487.13043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0K092_9PHAE1.950e-8392.59Ribosomal protein L16 n=1 Tax=Protohalopteris sp. ... [more]
A0A4Y5T7U0_9PHAE7.500e-5668.18Ribosomal protein L16 n=1 Tax=Dictyopteris divaric... [more]
V9PA30_UNDPI3.250e-5565.67Ribosomal protein L16 n=1 Tax=Undaria pinnatifida ... [more]
A0A089N0Z2_PETFA1.320e-5464.18Ribosomal protein L16 n=4 Tax=Scytosiphonaceae Tax... [more]
A0A1I9LW99_9PHAE5.360e-5463.91Ribosomal protein L16 n=1 Tax=Pleurocladia lacustr... [more]
A0A4D6E560_9PHAE7.610e-5463.43Ribosomal protein L16 n=4 Tax=Laminariaceae TaxID=... [more]
W5RG04_COSCS1.010e-5362.69Ribosomal protein L16 n=1 Tax=Costaria costata Tax... [more]
D0IPU3_SACAN4.120e-5362.69Ribosomal protein L16 n=6 Tax=Laminariales TaxID=2... [more]
A0A0U2M402_9PHAE8.310e-5362.69Ribosomal protein L16 n=18 Tax=Laminariales TaxID=... [more]
A0A3G5FPM2_9PHAE8.850e-5363.16Ribosomal protein L16 n=1 Tax=Cladosiphon okamuran... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000114Ribosomal protein L16PRINTSPR00060RIBOSOMALL16coord: 59..88
score: 38.87
coord: 43..54
score: 51.5
coord: 89..118
score: 24.33
IPR000114Ribosomal protein L16TIGRFAMTIGR01164TIGR01164coord: 1..127
e-value: 2.6E-28
score: 96.6
IPR000114Ribosomal protein L16PANTHERPTHR1222050S/60S RIBOSOMAL PROTEIN L16coord: 2..133
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10coord: 1..135
e-value: 4.8E-31
score: 110.0
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 2..134
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 3..132
e-value: 6.1E-26
score: 91.0
NoneNo IPR availablePANTHERPTHR12220:SF1339S RIBOSOMAL PROTEIN L16, MITOCHONDRIALcoord: 2..133
IPR020798Ribosomal protein L16, conserved sitePROSITEPS00701RIBOSOMAL_L16_2coord: 83..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig55487contigH-paniculata_contig55487:41..448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig55487.13043.1mRNA_H-paniculata_contig55487.13043.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig55487 41..454 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig55487.13043.1 ID=prot_H-paniculata_contig55487.13043.1|Name=mRNA_H-paniculata_contig55487.13043.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
MQPKKTKYRKYYKPRQLPKALTQTHKLKPISSLILVALESAYLNGRQIEA
ARQGIRRKIKRQGRLKIHLFTDIGVSHKSSASRMGKGKGKVNHWVGGLSA
GQTIFKLTGIPIKEGISALKCGANKLPLKLQIYKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000114Ribosomal_L16
IPR036920Ribosomal_L10e/L16_sf
IPR016180Ribosomal_L10e/L16
IPR020798Ribosomal_L16_CS