mRNA_H-paniculata_contig5541.13027.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5541.13027.1
Unique NamemRNA_H-paniculata_contig5541.13027.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 7.850e-114
Identity = 306/906 (33.77%), Postives = 446/906 (49.23%), Query Frame = 1
Query: 1822 AIAASQDSLAAGGDDAWRPDDECNPEMLIAVVRPKNALSAAGNNGLRFSHLQCMLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*LQAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVSAEQRGFGARASR--VDPQRMERRCVAANTGHGRSKRSRRSREELPSAAREGRRSGP*GQDNDLGLA-------------------A*QPT---PVG*ATWP**PAQRDRA--GRRG*SEIPQHVGDWISRGPKGTAIRRYQDRISSRVRPHGAE--VRWR*ARPGRSMPMLRS-----GGRHHAPHPHLPSSRGAGLPTLAATTRSRATA*ATGHQEHGGGRRFVYGGPGLPVGYCCPGRR----ALRCSHQRLPR*GYPD*RRPHRSPVSRTPRAQERYHRRLGPRHFRGAQKRALRSKR---------TCVLQRALFQTYPPLAMESFGRLGECGEELVE*VAPSVVGEEEGDEVSQKGVLLEQMKQFISVTTQIAISRRVQRYRLALRGRQEA 4395
            AIAAS+     G    WRP+ E +P++L+ V+  +++ S AGN+G RFSHL+ ++ T  GRE     + S W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV+GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC+  DN  +WVLE  +       E  FF   C  +R  L P+Q  QA +S+G+GGLGL +A  R +SA++G++   L  +IA   G LGE +R   PG  +V  +G  ++   ++ G      +  + P  +E       TG       RR       AA +G  + P    + LG A                   A  PT   P G          R R+  G+ G + +     D     P    +  Y  R +  +    AE   R    R G  +  + +      G     H  L  +    L  L       + A  TG +        +   PG       PG R     L  +H                      P+AQ   H R G     G + +A  +++           + +R+   T   LA+ESFGRLGE G E ++ +A   VG  +G  ++ KGV  E++ Q +SV TQ+AISRRVQRY+LALRGRQ+A
Sbjct:  346 AIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVDTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHGISVEILKGILPPSWVE--WALEPTGET----GRRQPTVAELAAHDGESTTPRKAQHKLGKAINKIQLEKFMESLEHLPQEAVPPTRDNPYGGQEARNMAYARTRSSQGQGGHAFLRAAPTDRAREIPSNEFV--YATRRALGIEEFLAERCPRCHRGREGEIITTVHARTCPRDGAQVNMHEPLKYALSRALNGLRVKHDVESGAPFTGERNLS---MDIVIRPGALTNASSPGYRNKGILLDVTHA--------------------DPQAQ--VHLRNGSATSDGTEIQASEARKRQHYSRPGHVSLDERSFKLT--TLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDA 1214          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 9.990e-108
Identity = 206/510 (40.39%), Postives = 299/510 (58.63%), Query Frame = 1
Query: 1822 AIAASQDSLAAGGDDAWRPDDECNPEMLIAVVRPKNALSAAGNNGLRFSHLQCMLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*LQAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVS 3345
            A AAS+     G    WRP+ E +P++L+ V+  +++ S AGN+G RFSHL+ ++ T  GRE     + S W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV+GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P        E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ +L R ++ +L   AC   DN  +WVLE  +       E  FF   C  +R  L P+Q  QA +S+G+GGLGL +A  R +SA++G++   L  +IA   G LG  +R   PG  +V  +G  ++ S
Sbjct:  367 AKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAIKVIAEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYLERGINHKLVRGACERLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGGSVRVRIPGTVLVERMGDAIKNS 874          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 1.480e-104
Identity = 203/516 (39.34%), Postives = 312/516 (60.47%), Query Frame = 1
Query: 1822 AIAASQDSLAAGGDDAWRPDDECNPEMLIAVVRPKNALSAAGNNGLRFSHLQCMLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSE-RQYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*LQAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVSAEQRGF 3363
            AIA S      G    WRP++E +P++LI V+  +++ S AGN+G RFSHL+ +  T  GRE     + S W+R +  P+ FPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VRQ++P LE    E  Q+GVAV+GG E + + A+   Q G+W+I  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  +++MD  E R +   +G+ QGDG+GP  F  I + PI+ K +++Y+ LGV    Y+DD+ L +  LTEE++QA+  LV +LA +G+  N AK+ A+ P  H+  +++   L  +G++V   G   VVG PIGTD +V++ A+ V+ E G E LAR+L  M D+Q A LI + S   ++ ++ R +D  L+ +AC   DN   W LE  +       E  FF  GC    L L P+Q  Q  +S+G+GGLG++SA  R +SA++G++ + L ++IA  +G LG+ ++   P  ++V  +G  ++   ++ G 
Sbjct:  516 AIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILI-PIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEG-ITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQWALETGMGIEGTESEEEFFQQGCQDTDLKLRPYQRAQTQLSTGAGGLGVSSAVMRRFSASLGNLISTLPEVIASLTGPLGDSVKEKIPNTTLVARMGDAIKELNQEHGL 1029          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 3.400e-103
Identity = 195/491 (39.71%), Postives = 287/491 (58.45%), Query Frame = 1
Query: 1897 EMLIAVVRPKNALSAAGNNGLRFSHLQCMLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLV-LAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*LQAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVSAEQRG 3360
            E    V+  +++ S AGN+G RFSHL+ ++ T  GRE     + S W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV+GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD++ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC   +N  +WVLE  +       E  FF   C  +R  L P+Q  QA +S+G+GGLGL +A  R +SA++G++   L  +I    G LGE +R   PG  +V  +G  ++   ++ G
Sbjct:    2 EARNRVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVRGACERLENMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIVALRGPLGESVRVRIPGTVLVERMGDNIKELNQEHG 490          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.140e-97
Identity = 184/448 (41.07%), Postives = 267/448 (59.60%), Query Frame = 1
Query: 2023 VGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*LQAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVSAEQRG 3360
            + S W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV+GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E SA +I+ MD  E R I   +G+ QGDG+GP  FF I + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L HMPDKQ A L+ ++S   ++  + R ++ +L   AC+  DN  +WVLE  +       E  FF   C  +R  L P+Q  QA +S+G+GGLGL +A  R +SA++G++   L  +IA   G LGE +R   PG  +V  +G  ++   ++ G
Sbjct:    1 MSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFI-LFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVLTEGGADKLARMLVHMPDKQVAHLVTSQSLTQRSGNIERGINHKLVRGACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHG 446          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 1.460e-91
Identity = 174/414 (42.03%), Postives = 249/414 (60.14%), Query Frame = 1
Query: 1822 AIAASQDSLAAGGDDAWRPDDECNPEMLIAVVRPKNALSAAGNNGLRFSHLQCMLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENIL 3057
            AIAAS+     G    WRP+ E +P++L+ VV  +++ S AGN+G RFSHL+ ++ T  GRE     + S W+R ++ P AFPPEF  L  QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV+GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + +     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q    LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G E LARLL  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC+  DN  +WVLE  +
Sbjct:  345 AIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGAEKLARLLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVLEATM 756          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 4.850e-84
Identity = 155/367 (42.23%), Postives = 219/367 (59.67%), Query Frame = 1
Query: 1822 AIAASQDSLAAGGDDAWRPDDECNPEMLIAVVRPKNALSAAGNNGLRFSHLQCMLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPD 2916
            AIAAS+     G    WRP+ E +P++L+ V+  +++ S AGN+G RFSHL+ ++    GRE     +   W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV+GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD    R I    G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPD
Sbjct:   68 AIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLF-CFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPD 432          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 1.010e-81
Identity = 243/764 (31.81%), Postives = 358/764 (46.86%), Query Frame = 1
Query: 2146 TMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*LQAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVSAEQRGFGARASR--VDPQRMERRCVAANTGHGRSKRSRRSREELPSAAREGRRSGP*GQDNDLGLAA*QPTPVG*ATWP**PAQRDRAGRRG*SEIPQHVGDWISRGPKGTAIRRYQDRISSRVRPHGAEVRWR*ARPGRSMPMLRSGGRHHAPHPHLPSSRGAGLPTLAATTRSRATA*ATGHQEHGGGRRFVYGGPGLPVGYCCPGRR----ALRCSHQRLPR*GYPD*RRPHRSPVSRTPRAQERYHRRLGPRHFRGAQKRALRSKRTCVLQRALFQTYPP-------LAMESFGRLGECGEELVE*VAPSVVGEEEGDEVSQKGVLLEQMKQFISVTTQIAISRRVQRYRLALRGRQEA 4395
            T RR  AAG VR+++P LE    E  Q+G AV GG E + + A+   Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  +V +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++ ++ R ++ +L   AC+  DN  +WVLE  +       E  FF   C  +R  L P+Q  QA +S+G+GGLGL +A  R +SA++G++   L  +IA   G LGE +R   PG  +V  +G  ++   ++        +  + P  +E     A    G + R + +  EL  AA +G  + P    + LG A                   ++       E  +H+        +G  I     R   R    GA+V                       H  L  +    L  L       + A  TG +        +   PG       PG R     L  +H                      P+AQ   H R G     G   +A  +++     R    ++         LA+ESFGRLGE G E ++ +A   VG  +G  ++ KGV  E++ Q +SV TQ+AISRRVQRY+LALRGRQ+A
Sbjct:    2 TWRRLIAAGTVREWKPKLEEIFREADQFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGINHKLVKGACKRLDNMVMWVLEATMGLRDTEVEEEFFQDDCQPDRFKLKPYQQAQARLSTGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVPIPGTVLVEQMGDAIKELNQEHAISVEILKGILPPSWVE----WALEPPGETGRRQPTVAEL--AAHDGESTTPRKAQHKLGKAI------------------NKIQLEKFMESLEHLPQ------EGEIITTVHARTCRR---DGAQVNM---------------------HEPLKYALSRALNGLCVKHDVESGAPFTGERNLS---MDIVIRPGALTNASSPGYRNEGILLDVTHA--------------------DPQAQ--VHLRNGSATSDGIAAQASEARKRQHYARPGHVSFDERSFKLTTLAVESFGRLGEEGYEFIDELATHAVGGRDGGTMALKGVFKERLLQIVSVATQVAISRRVQRYKLALRGRQDA 684          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 1.810e-79
Identity = 275/915 (30.05%), Postives = 389/915 (42.51%), Query Frame = 1
Query: 2023 VGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAELMDLRAKAHFQLGHW--------------------------------------------LIAL-------NCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*L--------QAAISSGSGGLGLTSAWSRGWSAAVGSMCAMLRQIIADSSGSLGERLRADFPGISMVR*LGATLRVSAEQRGFGAR--------------------ASRVDPQRMERRCVAANTGHGRSKRSRR-----------------SREELPSAAREGRRSGP*GQDNDLGLAA*QPTPV----G*ATWP**PAQRDR---------AGRR--G*SEIPQHVGDWISRGPKGTAIRRYQDRISSRVRPHGAEVRWR*ARPGRSMPMLRSGGRHHAPHPHLPSSRGAGLPTLAATTRSRATA*ATGHQEHGGGRRF---VYGGPGLPVGYCCPGRRALRCSHQRLPR*GYPD*RRPHRSPVSRTPRAQERYHRRLGPRHFRGAQKRALRSKRT--------CVLQRALFQTYPPLAMESFGRLGECGEELVE*VAPSVVGEEEGDEVSQKGVLLEQMKQFISVTTQIAISRRVQRYRLALRGRQEA 4395
            + S W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVAV  G E + + A+   Q GHW                                            LIAL       +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PIGTDA+V+  A+ V+ E G + LAR++  MPDKQ A L+ ++    ++  + R ++ +L   AC   DN  +WVLE  +      +E  FF   C  +R   L    +        QA +S+G+GGLGL +A  R +SA++G++   L  +IA   G LGE +R   PG  +V  +G  ++   ++                            R  P   E   +AA+ G   + R  +                 S + LP  A    R  P G      +A  +        G A     P  R R         A RR  G  E          +G +G  I   Q R  SR    GA+V                                       A    R            G R     +   PG       PG R                         +  P+AQ   H R G     G   +A  +++           ++R+L  T   +A+ESFGRLGE G E ++ +A   VG  +G  ++ KGV  E++ Q +SV TQ+AISRRVQRY+LALRGRQ+A
Sbjct:    1 MSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRVIAAGTVREWKPNLEERFREADQFGVAVVAGVEQVAMDAQLVHQTGHWVKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIGTDAYVEDIAMKVITEGGADKLARMVVRMPDKQVAHLVTSQLLTQRSGNIERGINHKLVRGACERLDNMVMWVLEATMGLRDAEDEEEFFQDDCQPDRFKRLAGALVPADAPPAAQARLSAGAGGLGLPAAVMRRFSASLGNLVGTLPAVIAALRGPLGESVRVRIPGTVLVERMGDAIKELNQEHAISVEILKGILPPSWVEWALEPTGETGRRQPTVAE---LAAHDGESTTPRKAQHKLGKAINDIQLEKLMESLKHLPQEAVPPTRDNPYGGQEARNMAYARTRSSKGQGGHAFLRAAPTDRAREIPSNEFVYATRRALGVEEFLAERCPRCHKGREGQIITTVQARTCSR---DGAQVNMHEPLKXXXXXXXXXXXXXXXXXXXXXXXXXXKYALSRALNGLRVKHDVESGAPFTGERNLSMDIVIRPGALTNASSPGYRNKGILLD----------------VTNADPQAQ--VHLRNGSATSDGTAAQASEARKRQHYARPGHAFVERSLKLT--TIAVESFGRLGEEGYEFIDELATYAVGGRDGGTMALKGVFNERLLQIVSVATQVAISRRVQRYKLALRGRQDA 887          
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.550e-77
Identity = 173/470 (36.81%), Postives = 246/470 (52.34%), Query Frame = 1
Query: 1822 AIAASQDSLAAGGDDAWRPDDECNPEMLIAVVRPKNALSAAGNNGLRFSHLQC-MLKTSAGREGCGPVVGSFWQRSMEQPDAFPPEF*ELFLQSNL-TLGEKCRPICVGSTMRRASAAGVVRQYRP*LEVNLSER-QYGVAVSGGAE--LMDLR---------------------------------AKAHF--------------------QLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKCYGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCREQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAKTKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAVTVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQACRLTDNGGLWVLENIL 3057
            AIAAS+     G    WRP+ E +P++L+ V+  +++ S AGN+G  FSHL   ++ T  GRE     + S W+R +  P+AFPPEF  L+ QS+L  LGEKCRP+C+G T RR  AAG VR+++P LE    E  Q+GVA +G  E   MD +                                 AKA +                    Q GHW++  +C+NAFN+ KR AI+ + A     L  ++A+CY E  A  I+ MD  E R I   +G+ QGDG+GP  F C  + PI+ K R +Y+ LGV L  Y+DD+ L    +T E +Q I  LV +L  +G+  N  K+ A+ P  H     E   L   G+ + E G   VVG PI TDA+V+  A+ V+ E G + LAR+L  MPDKQ A L+ ++S   ++  + R ++ EL    C   DN  +WVLE  +
Sbjct:  316 AIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLF-CFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEG-ITVVGVPIETDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGCIERGINHELVRGVCERPDNMVMWVLEATM 783          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5541.13027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMQ2_9PHAE7.850e-11433.77Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE9.990e-10840.39Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE1.480e-10439.34Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE3.400e-10339.71Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE1.140e-9741.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE1.460e-9142.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE4.850e-8442.23Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KYJ9_9PHAE1.010e-8131.81Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE1.810e-7930.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE1.550e-7736.81Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5541contigH-paniculata_contig5541:1210..6427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score61.2
Seed ortholog evalue9.2e-07
Seed eggNOG ortholog400682.PAC_15719669
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs39QPF@33154,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons2
Model size4651
Cds size885
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5541.13027.1prot_H-paniculata_contig5541.13027.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5541 3287..4171 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930581.4915497-UTR-H-paniculata_contig5541:1209..14351622930581.4915497-UTR-H-paniculata_contig5541:1209..1435Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5541 1210..1435 -
1691481357.8867779-UTR-H-paniculata_contig5541:1209..14351691481357.8867779-UTR-H-paniculata_contig5541:1209..1435Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5541 1210..1435 -
1622930581.511933-UTR-H-paniculata_contig5541:2002..32861622930581.511933-UTR-H-paniculata_contig5541:2002..3286Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5541 2003..3286 -
1691481357.8961148-UTR-H-paniculata_contig5541:2002..32861691481357.8961148-UTR-H-paniculata_contig5541:2002..3286Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5541 2003..3286 -
1622930581.54764-UTR-H-paniculata_contig5541:4171..64271622930581.54764-UTR-H-paniculata_contig5541:4171..6427Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5541 4172..6427 -
1691481357.921564-UTR-H-paniculata_contig5541:4171..64271691481357.921564-UTR-H-paniculata_contig5541:4171..6427Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5541 4172..6427 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930581.5300713-CDS-H-paniculata_contig5541:3286..41711622930581.5300713-CDS-H-paniculata_contig5541:3286..4171Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5541 3287..4171 -
1691481357.903959-CDS-H-paniculata_contig5541:3286..41711691481357.903959-CDS-H-paniculata_contig5541:3286..4171Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5541 3287..4171 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5541.13027.1

>prot_H-paniculata_contig5541.13027.1 ID=prot_H-paniculata_contig5541.13027.1|Name=mRNA_H-paniculata_contig5541.13027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=295bp
MDLRAKAHFQLGHWLIALNCTNAFNSVKRAAILVEVAIRTLGLTPFVAKC
YGEKSADTIFQMDISEGRKISSNTGIDQGDGLGPAFFFCIPVGPILHKCR
EQYEGLGVELLVYLDDLVLAMGQLTEETLQAIDFLVPKLARIGVQSNNAK
TKAVSPMNHVPIERENAALAAMGISVEERGGAMVVGTPIGTDAFVQQHAV
TVVKEKGEEHLARLLAHMPDKQAAMLIATKSRDLKACFLARVMDAELSDQ
ACRLTDNGGLWVLENILEHSQPAEEHAFFDAGCPANRLNLLPHQ*
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mRNA from alignment at H-paniculata_contig5541:1210..6427-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5541.13027.1 ID=mRNA_H-paniculata_contig5541.13027.1|Name=mRNA_H-paniculata_contig5541.13027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5218bp|location=Sequence derived from alignment at H-paniculata_contig5541:1210..6427- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACGCGCTTCAGTGCAAACCCATCCACCCCGAAAAAAGAAAACGCGATGAG AAGCGATCTCTTGCTGACGATGGCGATATCACGTTAGGTTTGTTGTATTC TCCATATATATGATGTACACATAATTCTTGCGTTTTCCAAAGTGCGACAA CATGACTGATACGGAACAATTTGAGGGGGGTCTGAGTTGGATACGTCACT GGACTAACCGTGGCCTGCGTATTACAGTAAAGAGTATGACCCTCTGCTTG TTTTTATGTAACTCCTGTATTTTCCAGGATATTCTACTCACCGATTGGAA ATTCTTCCCTGCTACCACCTCCGCGCCTCGAAAACCAGGACCGACACCAT GGCTACAGCGGTAGTATCAACCCCCCCTCCCACCCCAGGCCACCCCAGGT TAAGAAGCCTCTGGTGCGGCGGCGGGTGTACCTGAGTCGATGAATGACAT TTTGTACTAGGAATTGTCTTTTTGTCTAGCATGGGACAGCAGGATTATGA TGATTAGCCATTAATACTGAAAATATTTATTTAGCCCGATATACAGGCAC TGCCTTGAACTGTCTGGCGAGGGACAACGGAACTACGACGGTTAATCGTT TAGTATGTGGAGCTTGTAGAATATTTGGCCTCTTCCTTTCCTTTCCTCTA CTTTGATCCTAGATCCTACACCCAACTCCATTGGAATACAAGATAAGCAC GATTCTGCAACGCGCTAACGAGTTAAGCAATGCTCTCCTCAGAAAGGACA GGATGTCACATTTTCTTCGCCTGTGCAATTGTCGCTGTTGCTTTTTTACA GCTTATAACTAACTAACGCCCTTTTAATTGGGAGAAAATACCGTACAGCA GACATGAGTGTGTTCTGCAATAGGATTTCCCACGTGGGAACAAGGTATTT GATTCATATTCCTGGTGTGCGGCTCTCTTCCGTCACAGTCGTGCATGTTA TGTACGTTACGCTCCTCTCTAGTGCTGTAGATTCGTGGTGTGCACAACCA TGCGGACTTGTGTTTGGACCGGATGAGGCTGTTCGGGAACAAACTAATGT AACACAAATGTTCTATAAAGCGCTGTAGTTGATGCCCTTGGCGAAAGTAC CGTAAACTGCTCTTAGAAAGTGTAGGGGTGCCAATTTTCTTTGCGGTTAT TTCGAATTCATAGACAACAAAAACCCATGTGCGTTCGAGAAGCATGTCGA TCGACAGATCTCGATATAAGATGTATCTTTGATCTTTTCAGCGACACGGC TCTCGGTGTGAAAGCGCGGCAGGCAGTCTGGGAGAAAAATCAGGATTAAA TAAATAGTCTCCTCGTGACGTTCTGAGAGCCCTTCACGGCATATCAAGTG TATGTCATAATTATGTGTGTGATGACCGTCTGTCTATCTCAACAACGACG GCTCCCTATGCCCCAATACAGTCATTTGATGAGGGGTCATATTTCCATGG TACAGAGGGATCACCCGAGAAAATCAGGACCACAAGGGTCGAAATTATTG CACTTTTACAGGACTTGATGCGAAGCCACTGGACATGACGAAAAGGAGAT TCGCCTTTGGACGGGACGGAGCGGGCAGGGACGAGGATTCATATTTGGAC GTAACGGGGTGAAACGGCGGAGATTGAGATTTTGTATCGAACGAGATCTG ACTATTATTTAACCATATATTGTGGGAAAATGTTATGCTTCTCAAAGAAA ATGACCTTGTGCTGTAGAGCGAAATTGGCGCAAAATCAATTCATTTGGCA ACATGATGCAAAAATTGTACACATCCGAAAGAGCACAACACATGCAGGGA CATCAGTGACGGAAAACAGCGGCCATAGCAGCAAGCCAGGATTCGCTCGC CGCGGGCGGAGATGACGCCTGGAGGCCAGACGACGAGTGTAACCCCGAAA TGCTGATAGCGGTTGTGAGGCCGAAGAACGCCCTGTCTGCGGCGGGTAAC AATGGCCTGCGTTTCTCCCATCTGCAGTGCATGCTGAAGACGTCAGCGGG TAGGGAAGGTTGTGGCCCCGTTGTCGGGTCTTTCTGGCAGCGCTCCATGG AACAACCCGATGCCTTCCCACCGGAGTTTTGAGAGTTATTCCTCCAAAGC AACCTTACGCTCGGGGAGAAGTGCCGCCCGATCTGCGTGGGATCTACGAT GAGGCGTGCTTCGGCAGCAGGGGTGGTCAGGCAGTACAGGCCGTAACTGG AGGTTAACTTGTCGGAGCGGCAATACGGGGTAGCGGTTTCGGGTGGCGCG GAGCTCATGGACCTCCGCGCGAAGGCACACTTCCAATTGGGACATTGGCT TATCGCCCTCAACTGTACCAATGCATTCAACTCCGTCAAGCGGGCGGCGA TCTTGGTAGAAGTGGCAATCCGCACCCTCGGACTGACACCTTTCGTAGCC AAATGCTATGGGGAGAAGTCGGCAGATACGATTTTCCAGATGGACATCAG TGAAGGCAGAAAAATCTCTTCGAACACGGGAATCGACCAGGGCGATGGAC TGGGACCCGCCTTCTTCTTCTGCATACCCGTGGGACCCATCTTGCACAAG TGCCGAGAACAATACGAGGGTCTGGGGGTAGAGCTGTTGGTCTACCTGGA CGATCTGGTGCTGGCAATGGGGCAGTTGACGGAGGAAACCTTACAGGCGA TCGATTTCCTCGTGCCAAAGCTAGCACGCATAGGAGTGCAGAGTAACAAC GCCAAGACAAAGGCGGTGTCTCCAATGAACCACGTCCCCATCGAAAGGGA GAACGCCGCGCTGGCGGCGATGGGCATCAGCGTCGAAGAGCGAGGGGGGG CTATGGTGGTGGGCACACCGATTGGGACCGACGCATTCGTTCAGCAGCAC GCCGTCACAGTAGTCAAGGAAAAGGGGGAAGAGCATCTTGCGCGTCTATT GGCGCATATGCCCGACAAACAAGCGGCGATGCTGATCGCCACAAAGTCCA GGGACTTGAAGGCCTGCTTCCTGGCGAGAGTGATGGACGCCGAGCTTTCC GACCAAGCCTGCAGACTAACCGACAATGGCGGACTATGGGTGTTGGAGAA CATCTTGGAACACTCGCAACCAGCAGAAGAACACGCCTTCTTCGACGCCG GCTGCCCGGCGAACCGTCTCAACCTCTTGCCCCACCAGTGACTCCAGGCC GCCATATCGTCTGGTTCAGGCGGTTTGGGACTCACCTCGGCATGGAGCAG GGGCTGGTCAGCAGCGGTGGGGAGTATGTGCGCCATGCTGCGGCAGATAA TCGCAGACTCGTCGGGATCGTTGGGGGAGCGGTTGCGGGCAGATTTCCCC GGGATATCGATGGTGCGCTGATTGGGTGCAACTCTCCGTGTTTCGGCAGA ACAGAGAGGATTTGGCGCCCGGGCTAGTCGCGTGGACCCACAGAGGATGG AGCGAAGATGTGTCGCTGCCAACACCGGACATGGACGTTCTAAGAGGTCA CGACGCTCCAGGGAGGAACTCCCGTCGGCTGCAAGGGAAGGCCGGCGATC TGGTCCATAAGGCCAAGATAACGACCTTGGCCTCGCTGCTTGACAACCTA CCCCCGTCGGGTAGGCCACCTGGCCTTAATGACCCGCTCAGAGGGATCGA GCCGGCCGACGCGGCTAAAGCGAGATTCCGCAGCATGTCGGAGACTGGAT CTCTCGTGGCCCAAAGGGCACAGCTATACGACGATACCAGGACCGTATCT CCAGCAGAGTGCGTCCTCATGGAGCGGAGGTTCGTTGGCGTTGAGCCCGA CCTGGCCGCTCGATGCCCATGCTGCGGAGCGGAGGACGTCACCACGCGCC ACACCCGCATCTTCCATCGAGCCGGGGCGCAGGTCTACCAACACTAGCCG CTACTACACGCAGTCGCGCGACTGCTTAAGCGACTGGGCATCAGGAGCAC GGTGGAGGACGGAGATTCGTTTACGGCGGACCGGGTCTACCGGTTGGATA TTGTTGTCCCGGCAGGAGAGCTCTGAGATGCTCCCACCAACGCCTACCGC GTTAAGGGTATCCTGATTGACGTCGCCCACACAGATCCCCAGTCAGCAGG ACACCTCGAGCGCAGGAGCGCTACCATCGACGGCTCGGCCCCCGCCACTT CCGAGGCGCGCAAAAGCGCGCACTACGCTCGAAGAGGACGTGTGTCCTTC AACGAGCGTTGTTTCAAACTTACCCCCCGCTGGCGATGGAAAGCTTTGGG CGTCTGGGAGAGTGCGGGGAGGAACTGGTTGAGTAGGTGGCACCTAGCGT GGTGGGGGAAGAGGAGGGCGACGAGGTTTCGCAGAAAGGAGTACTGCTAG AGCAGATGAAACAATTCATTTCGGTGACTACACAGATCGCCATCTCGAGA CGGGTGCAGAGATACAGACTGGCCCTGCGGGGAAGGCAAGAAGCAGCCGA AGGGGCCCTCAATCCTCGAGCGTAGGTGTGGAGTTTAACGGCGCCGTAGT ATTCCATCACAATATTACTATCATTTTTATCTTGCATATGTCATTCTGTT AAATACAGGAGGGATTTCACTATTCGGAACTGGTAATAATATTAAGTTAC ACATTTATAGTGCTCAAGTGAGGGACAACAGTTTATTTGCCCAATAGGTT TTTCTGTAGGTCGGGTACTTGAGGACAGAGTGGAGTTATTATTAGGTTTG ATTTTTTCTTGTTTCGTCTGAAGTTCATTTTGTTAGTTTATGTGCTTACT CCTGAAGATTCCTAGCAGCCAGTTTCGAGTCTGCTATTGCCAGAAGGCAA ATACATCAATAGTAGAAGGAGCAAGGTTTCGAAGTAATCCGTGGTAATCA GCCGATATTTTGCCAGAATTCTCGCTCTTTTGGTGGACCCTTTTTGCGTC TTGCGATGTGGGTATAGTATACATGTAATATATACTCCGTAGAACTCTTT ACATATATGGCTCTATATCTGCTGTTCTGCTGTCTTTTCGTCGTCTTCCA TCCATACTTTTTCTCCTTCTCCGTGTTATGCCACCACGACAGGAACTCCT ACACTGCATATTCGAGTCCTATGGCGTTCAGGTGGGAAGCAAGACTCAGG TGGCGAAGACAAGATTCATCATGGCTGTTAGGTTTTTGGTTAGTTATGCT TCTGGCAACACTCCCTAGTCGTCTAGCAGACCGACGAGAACGTTCAGTGG GCCTTTGAAGGAGGAATGGGGAGTTGGGGCGCGGGGAAGGAGGTGTATGG AAAACTATACTGCAGCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig5541:1210..6427-

>mRNA_H-paniculata_contig5541.13027.1 ID=mRNA_H-paniculata_contig5541.13027.1|Name=mRNA_H-paniculata_contig5541.13027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1770bp|location=Sequence derived from alignment at H-paniculata_contig5541:1210..6427- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACCTCCGCGCGAAGGCACACTTCCAATTGGGACATTGGCTTATCGC
CCTCAACTGTACCAATGCATTCAACTCCGTCAAGCGGGCGGCGATCTTGG
TAGAAGTGGCAATCCGCACCCTCGGACTGACACCTTTCGTAGCCAAATGC
TATGGGGAGAAGTCGGCAGATACGATTTTCCAGATGGACATCAGTGAAGG
CAGAAAAATCTCTTCGAACACGGGAATCGACCAGGGCGATGGACTGGGAC
CCGCCTTCTTCTTCTGCATACCCGTGGGACCCATCTTGCACAAGTGCCGA
GAACAATACGAGGGTCTGGGGGTAGAGCTGTTGGTCTACCTGGACGATCT
GGTGCTGGCAATGGGGCAGTTGACGGAGGAAACCTTACAGGCGATCGATT
TCCTCGTGCCAAAGCTAGCACGCATAGGAGTGCAGAGTAACAACGCCAAG
ACAAAGGCGGTGTCTCCAATGAACCACGTCCCCATCGAAAGGGAGAACGC
CGCGCTGGCGGCGATGGGCATCAGCGTCGAAGAGCGAGGGGGGGCTATGG
TGGTGGGCACACCGATTGGGACCGACGCATTCGTTCAGCAGCACGCCGTC
ACAGTAGTCAAGGAAAAGGGGGAAGAGCATCTTGCGCGTCTATTGGCGCA
TATGCCCGACAAACAAGCGGCGATGCTGATCGCCACAAAGTCCAGGGACT
TGAAGGCCTGCTTCCTGGCGAGAGTGATGGACGCCGAGCTTTCCGACCAA
GCCTGCAGACTAACCGACAATGGCGGACTATGGGTGTTGGAGAACATCTT
GGAACACTCGCAACCAGCAGAAGAACACGCCTTCTTCGACGCCGGCTGCC
CGGCGAACCGTCTCAACCTCTTGCCCCACCAGTGAATGGACCTCCGCGCG
AAGGCACACTTCCAATTGGGACATTGGCTTATCGCCCTCAACTGTACCAA
TGCATTCAACTCCGTCAAGCGGGCGGCGATCTTGGTAGAAGTGGCAATCC
GCACCCTCGGACTGACACCTTTCGTAGCCAAATGCTATGGGGAGAAGTCG
GCAGATACGATTTTCCAGATGGACATCAGTGAAGGCAGAAAAATCTCTTC
GAACACGGGAATCGACCAGGGCGATGGACTGGGACCCGCCTTCTTCTTCT
GCATACCCGTGGGACCCATCTTGCACAAGTGCCGAGAACAATACGAGGGT
CTGGGGGTAGAGCTGTTGGTCTACCTGGACGATCTGGTGCTGGCAATGGG
GCAGTTGACGGAGGAAACCTTACAGGCGATCGATTTCCTCGTGCCAAAGC
TAGCACGCATAGGAGTGCAGAGTAACAACGCCAAGACAAAGGCGGTGTCT
CCAATGAACCACGTCCCCATCGAAAGGGAGAACGCCGCGCTGGCGGCGAT
GGGCATCAGCGTCGAAGAGCGAGGGGGGGCTATGGTGGTGGGCACACCGA
TTGGGACCGACGCATTCGTTCAGCAGCACGCCGTCACAGTAGTCAAGGAA
AAGGGGGAAGAGCATCTTGCGCGTCTATTGGCGCATATGCCCGACAAACA
AGCGGCGATGCTGATCGCCACAAAGTCCAGGGACTTGAAGGCCTGCTTCC
TGGCGAGAGTGATGGACGCCGAGCTTTCCGACCAAGCCTGCAGACTAACC
GACAATGGCGGACTATGGGTGTTGGAGAACATCTTGGAACACTCGCAACC
AGCAGAAGAACACGCCTTCTTCGACGCCGGCTGCCCGGCGAACCGTCTCA
ACCTCTTGCCCCACCAGTGA
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