mRNA_H-paniculata_contig5539.13022.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5539.13022.1
Unique NamemRNA_H-paniculata_contig5539.13022.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.090e-29
Identity = 106/302 (35.10%), Postives = 158/302 (52.32%), Query Frame = 1
Query:    4 LRVPLEHAAAEGEVE-------LVHSLVAA--GACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLK----RAHIECVDLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAV----ELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
            +RV L+ A   G V+       LV + VA+     VD+ D     LH++  +   E  V  LL  GA  +  D +G TPLHL    G+   +  LL        H    +    + L  A   G A V+R +LQHGVD    ++   T L +AA  N+  A+DVL+EAGA VE ++D    P++    A    C  A LAL +  A++ A+D+ G  PL  A+R+   + V    ++LLR GAD+T ++  G+ AAE++G  ++          ++RV ++L  APA+RAWRRRGL+V+CRA
Sbjct:   50 MRVALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSD----QLHVSASQG-QEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWN-RSYSVLDFAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLD---ACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.990e-29
Identity = 107/301 (35.55%), Postives = 157/301 (52.16%), Query Frame = 1
Query:    4 LRVPLEHAAAEGEVE-------LVHSLVAA--GACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIEC---VDLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAV----ELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
            +RV LE A   G V+       LV + VA+   A VD+ D     LH+A  +   E  V  LL  GA  +  D +G TPLHL    G+   +  LL           +     + L LA   G A V+R +LQHGVD    ++   T L +AA  N+  A+DVL+EAGA VE ++D    P++    A    C  A LAL +  +++ A+DI G  PL  A+R+   + V    ++LLR GAD+T ++  G+ AAE++G  ++          ++RV ++L  AP +RAWRRRG +V+CRA
Sbjct:    1 MRVALEEAVDSGHVDESAVEPILVVAKVASLQYASVDSSD----QLHVAASQG-QEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLD---ACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 6.010e-25
Identity = 112/329 (34.04%), Postives = 143/329 (43.47%), Query Frame = 1
Query:    1 WLRVPLEHAAAEGEVELVH-------------------SLVAAGACVDAPDFTVG--PLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDG----------RTPLLLAIHGGHARVMRELLQHGVDPIP--CSEYTLTPLQIAAKYNQPDAVDVLIEAGAK--VEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQP---EAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLA--KADAMQRVLNMLIL---APAERAWRRRGLMVMCRA 858
            WLRVPL  A   G  +LV                    +L++AGA V+  D   G  PLH A+ R  +  VV  LL  GA  +  D                          A        G             + +A   GH  V++  L+HGVD     C     T L  AA  NQ +AV+VL+EAGA   VE    S  Y   PL  AAE     A+  LL+  AD N  D +G  PLH A+ +  P   E V+LLLRWGA +T V+  G   AE+        +RLA  + DA +     L+L   APA+RAWRRRG +VM RA
Sbjct:   37 WLRVPLNCAVTSGNEDLVTRLLDTGGDVNRLDHLGRSTTLISAGADVNDRDPAEGCYPLHAAVRRGCDR-VVADLLAAGAAPNNTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYD-TPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVF-------QRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRA 356          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.710e-22
Identity = 95/306 (31.05%), Postives = 140/306 (45.75%), Query Frame = 1
Query:   13 PLEHAAAEGEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVVQAL--------------LDRGACLHR-----RDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLD-GRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKV----QPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
            PL+ AA EG V    +L+ AGA  DA   + G    AL  +  +     +              +D    LH      +   G TPLHLVA  G       LL   A +       G +                   HG D        +T L++A+ +++  A+DVL EAGA +E   +       PL +A++ G  AA +ALL+  A V  ++ + + PLH  + K       E V+LLLR GAD+T V   G  AA+M+   LK ++  + A+ + RV  +L  APA+RAWRRRG +++ RA
Sbjct:  410 PLQMAAGEGNVAATQALLDAGA--DASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGS----TPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVV--LKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.470e-20
Identity = 92/312 (29.49%), Postives = 131/312 (41.99%), Query Frame = 1
Query:    1 WLRVPLEHAAAEGEVELVHSLVAAG-------ACVDAPDFTVG--PLHLALHRSTNEPVVQALLDRGACLHRRDNK-----------------GNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
            WLR PLEHAA  G  +LV  L+ AG         + A     G  PL LA+    NE   +AL+  GA ++  D K                 GN P+HL A  G+D +   L+ KR  + CV+++ RTPL +A+   H   ++ LL  G DP          L +                       E        PL   A  G CAAML LLQ  A+VN+++  G+       R     A+ +++R  A+         RAA +                ++ V  +L+ AP +RAWRRRG +V+ RA
Sbjct:   20 WLRAPLEHAAGTGNRDLVDKLLGAGLRRAGAGGDMKAKTLDTGHTPLDLAVVGG-NEAAAEALIMAGADMNVLDVKNDGLLHLTITGGHAGSNGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIERRTPLYVAVRENHVSTVKVLLAEGADP--------NSLNLLLMXXXXXXXXXXXXXXXXXXDIERRTSRESTPLHATAAFGSCAAMLTLLQLGANVNSKENRGK------PRPKGKAAISVVIRCMAET--------RAASL--------------PRLEHVSELLVPAPQDRAWRRRGFVVLRRA 294          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.150e-20
Identity = 93/322 (28.88%), Postives = 135/322 (41.93%), Query Frame = 1
Query:   16 LEHAAAEGEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIEC----------------------------VDLDGR------TPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDS---IIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLH----AASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
            LEHAA  G   L   LV AGA        +G    A  R  +  + + LL+ GA     D +G TPL                                                     D++ R      + L +    GH   +R L++HG D    +   +  L  A   N+ +A+DVL+ AGA      +S   +++     R   E    A +  LL+  ADVNAQ + G   L      A ++   E V+LLLRWGAD+T+V   G RAA+ IG  + ++ R+   +  + V  +L  APA+RAWRRR  +V+CRA
Sbjct:   38 LEHAAGRGHEHLTRKLVEAGA-------EIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEA---ATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIP--EEFEGVRKLLANAPADRAWRRRCSLVLCRA 347          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5JU40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.140e-19
Identity = 98/332 (29.52%), Postives = 138/332 (41.57%), Query Frame = 1
Query:    1 WLRVPLEHAAAEGEVELVHSLVAAGAC-------------------------------VDAPDFTVG-------------PLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDGRTPLLLAI---HGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGC-CAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMC 852
            WLR P E AA+ G++ L  +L+ AGA                                +DA +F VG             P+H A   ++ E V+ AL+  GA  H  D+ G  PL   A+ G +                  +   PLL A+         + R LLQHG D     +Y +   +     N    V +L++AGA V+G  D       PL  A      C  +  LL   A+VN QD  G   LH  + +     V+LLLR GAD+T   N G  +     A LK   +    +A + VL +L  APA+RAWRRRG +++C
Sbjct:   35 WLRAPFERAASAGDIPLTMALMKAGASGDAFSSAALGTPATHNSRLLTALHHAAAGTKLDAMEFLVGSGADANGGALKWRPIHFATEANSPEAVL-ALVRHGADPHAEDSLGRPPLCCAADRG-NMXXXXXXXXXXXXXXXXHEVCPPLLFAVLSRSNNSEDMTRALLQHGADVNELDDYEIAINEAVRCGN---VVKLLLKAGALVDGHNDFHGLVLAPLHAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAVRFSSRLVDLLLRHGADETI--NNGDSSTPADCARLKAGHQ----EASRPVLRLLGGAPADRAWRRRGRVLLC 355          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 8.490e-19
Identity = 94/299 (31.44%), Postives = 136/299 (45.48%), Query Frame = 1
Query:   61 LVAAGACVDAPDFT--VGPLHLALHRSTNEPVVQALLDRGA---CLHRRDNKGNTPLHLVANLGYD-----CLLSPLLLKRAHIECV-------------DLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRK---VQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAM--------QRVLNMLILAPAERAWRRRGLMVMCR 855
            L+ AGA V+  D     GPL  A+    ++ +V  LL  GA    + R      TPLH  A  G        L SP   K  H+  V             DLD  + L+ A       VM+ LL+HGVD +   E    PL  AA++N    + VL++AGA ++  + S +     L  AAE G   A+LALL+R A+V+     G   LH  S        + V++LLR GA +  VD  G+   ++     + ++R   A  M        +R + +L  APA+R WRRR  ++M R
Sbjct:  122 LILAGADVNFVDRADKAGPLFAAVKAGCDD-LVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVD-VNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDV-KCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLF---KRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLR 414          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5K4P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P5_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 4.380e-17
Identity = 91/302 (30.13%), Postives = 136/302 (45.03%), Query Frame = 1
Query:   37 GEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDG----RTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAA------------KYNQPDA--VDVLIEAGAKVEG------DEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADV-NAQDISGRWPLH--AASRKVQP-EAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
            GE   +H  +A    +DA   +   LH A+     +    A++  GA    +D  GNTPLH  A    D  +  LL + A +   + +G    R+PL  A     A + R LL++G D +   +   T L  AA             +N  +A  +D L+EA   +E       +         PL +AA        +A L RK  V NA+   GR PLH    + K+   + V+LLLRWGAD+T +DN G     ++         + +++  + +  ML  AP +RAWRR G +VMCRA
Sbjct:   75 GERTALHGALADVGLLDAKGRSA--LHYAIEGGHLQLAGDAVIG-GADPKAKDIDGNTPLHFAAAYDDDKFVGTLLRRGAQVNAANNEGNLNERSPLFFA--HDQAAMTRTLLEYGADILSVDQLGFTALHAAAVEVFGYFSPRLLMWNAENAKVIDTLLEARVDLEARSVEFFEGSQRFRGLTPLHLAAYHQ--KVSMAELSRKGAVDNAKCDDGRTPLHMLCTNPKLNSWDTVDLLLRWGADETAIDNEGYTPEALV---------VGRSNRSRALRQMLDKAPEDRAWRRWGTLVMCRA 360          
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5L2S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.670e-16
Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = 1
Query:  313 LLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQD-ISGRWPLHAASRKVQPEAV-ELLLRWGADKTNVDNGGQRAAEMIGAGLKK--KKRLAKADAMQRVLNMLILAPAERAWRRRGLMVM 849
            L LA+   +   +RELL  G +     E  LT L +A +     A+ +LI+ G+         ++    L  AA GG  A + AL+ R A+++A+  + G+ PLH A+   Q  AV EL+LRWGAD+T +D  G+ A++++G  LK    +    A+ ++R+  ML  APA+R W RR  +VM
Sbjct:  131 LPLAVKHNYLDCVRELLTLGANVEAVDEIGLTALLVATRAGNVSAIGILIDLGSADVNSRGQTVW--TALHFAAHGGDPATIEALVTRGAELSARTTLKGKSPLHIAAGHAQTRAVQELVLRWGADETQLDGHGRSASDIVGV-LKNVFDRGAGHAEEVERIKVMLANAPADRRWNRRRDVVM 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNU3_9PHAE1.090e-2935.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI1.990e-2935.55Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FSI6_ECTSI6.010e-2534.04Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JHY9_9PHAE4.710e-2231.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYJ2_9PHAE2.470e-2029.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI3.150e-2028.88Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JU40_9PHAE3.140e-1929.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI8.490e-1931.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4P5_9PHAE4.380e-1730.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2S0_9PHAE2.670e-1634.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5539contigH-paniculata_contig5539:10938..11894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.9
Seed ortholog evalue7.7e-27
Seed eggNOG ortholog2880.D7G6X8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size858
Cds size858
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930580.8348222-CDS-H-paniculata_contig5539:10937..112551622930580.8348222-CDS-H-paniculata_contig5539:10937..11255Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5539 10938..11255 +
1691481357.6197739-CDS-H-paniculata_contig5539:10937..112551691481357.6197739-CDS-H-paniculata_contig5539:10937..11255Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5539 10938..11255 +
1622930580.8549268-CDS-H-paniculata_contig5539:11354..118941622930580.8549268-CDS-H-paniculata_contig5539:11354..11894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5539 11355..11894 +
1691481357.634295-CDS-H-paniculata_contig5539:11354..118941691481357.634295-CDS-H-paniculata_contig5539:11354..11894Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5539 11355..11894 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5539.13022.1prot_H-paniculata_contig5539.13022.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5539 10938..11894 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5539.13022.1

>prot_H-paniculata_contig5539.13022.1 ID=prot_H-paniculata_contig5539.13022.1|Name=mRNA_H-paniculata_contig5539.13022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
WLRVPLEHAAAEGEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPV
VQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLD
GRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAV
DVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQD
ISGRWPLHAASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKK
KRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA
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mRNA from alignment at H-paniculata_contig5539:10938..11894+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5539.13022.1 ID=mRNA_H-paniculata_contig5539.13022.1|Name=mRNA_H-paniculata_contig5539.13022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=957bp|location=Sequence derived from alignment at H-paniculata_contig5539:10938..11894+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGTTGAGAGTGCCGCTCGAGCACGCGGCTGCAGAGGGTGAAGTAGAGCT AGTTCACAGCCTCGTGGCAGCTGGGGCTTGTGTGGATGCCCCAGATTTTA CAGTGGGTCCCCTGCACTTGGCGTTACACCGCAGCACAAATGAGCCAGTC GTGCAGGCACTGCTCGACAGAGGAGCTTGTCTTCACCGTCGAGACAACAA AGGCAACACTCCTCTTCATCTCGTGGCCAACTTGGGTTACGACTGCCTCT TATCTCCACTGCTGCTGAAGAGGGCACACATAGAGTGTGTAGATTTGGAT GGGCGTACGCCGCTACTTGTGGCTGCCGAGAAAGGACGCGTGTTCGCAGC GAGAGTTTTGTTGGAAGCGAAGGCGAACGTGGATGTAAGGGACTACAAAG GCCATTCAGCCCTTGAGTTAGCGATTCATGGTGGACATGCTCGCGTGATG AGAGAGCTATTGCAGCACGGGGTTGATCCCATCCCGTGTAGCGAATATAC TTTGACCCCTCTGCAAATTGCTGCCAAATACAACCAGCCAGATGCTGTGG ATGTGCTTATTGAGGCGGGAGCTAAAGTCGAAGGAGATGAGGATAGTATC ATCTATCCGTATGTCCCGCTGCGCATGGCCGCGGAAGGTGGCTGCTGTGC TGCAATGCTTGCCCTATTGCAGCGCAAAGCCGATGTTAATGCACAGGATA TATCTGGGCGGTGGCCCTTGCATGCAGCCAGTAGAAAGGTGCAACCGGAG GCGGTCGAGTTGCTGTTAAGATGGGGTGCAGACAAGACCAATGTCGACAA TGGTGGCCAACGTGCTGCGGAGATGATCGGAGCAGGCCTTAAAAAGAAGA AGCGCCTAGCGAAAGCTGATGCTATGCAGCGAGTGCTCAATATGCTGATA CTCGCTCCGGCAGAAAGGGCGTGGCGTCGACGGGGCTTGATGGTCATGTG TCGCGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig5539:10938..11894+

>mRNA_H-paniculata_contig5539.13022.1 ID=mRNA_H-paniculata_contig5539.13022.1|Name=mRNA_H-paniculata_contig5539.13022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig5539:10938..11894+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGTTGAGAGTGCCGCTCGAGCACGCGGCTGCAGAGGGTGAAGTAGAGCT
AGTTCACAGCCTCGTGGCAGCTGGGGCTTGTGTGGATGCCCCAGATTTTA
CAGTGGGTCCCCTGCACTTGGCGTTACACCGCAGCACAAATGAGCCAGTC
GTGCAGGCACTGCTCGACAGAGGAGCTTGTCTTCACCGTCGAGACAACAA
AGGCAACACTCCTCTTCATCTCGTGGCCAACTTGGGTTACGACTGCCTCT
TATCTCCACTGCTGCTGAAGAGGGCACACATAGAGTGTGTAGATTTGGAT
GGGCGTACGCCGCTACTTTGGTTGAGAGTGCCGCTCGAGCACGCGGCTGC
AGAGGGTGAAGTAGAGCTAGTTCACAGCCTCGTGGCAGCTGGGGCTTGTG
TGGATGCCCCAGATTTTACAGTGGGTCCCCTGCACTTGGCGTTACACCGC
AGCACAAATGAGCCAGTCGTGCAGGCACTGCTCGACAGAGGAGCTTGTCT
TCACCGTCGAGACAACAAAGGCAACACTCCTCTTCATCTCGTGGCCAACT
TGGGTTACGACTGCCTCTTATCTCCACTGCTGCTGAAGAGGGCACACATA
GAGTGTGTAGATTTGGATGGGCGTACGCCGCTACTTTTAGCGATTCATGG
TGGACATGCTCGCGTGATGAGAGAGCTATTGCAGCACGGGGTTGATCCCA
TCCCGTGTAGCGAATATACTTTGACCCCTCTGCAAATTGCTGCCAAATAC
AACCAGCCAGATGCTGTGGATGTGCTTATTGAGGCGGGAGCTAAAGTCGA
AGGAGATGAGGATAGTATCATCTATCCGTATGTCCCGCTGCGCATGGCCG
CGGAAGGTGGCTGCTGTGCTGCAATGCTTGCCCTATTGCAGCGCAAAGCC
GATGTTAATGCACAGGATATATCTGGGCGGTGGCCCTTGCATGCAGCCAG
TAGAAAGGTGCAACCGGAGGCGGTCGAGTTGCTGTTAAGATGGGGTGCAG
ACAAGACCAATGTCGACAATGGTGGCCAACGTGCTGCGGAGATGATCGGA
GCAGGCCTTAAAAAGAAGAAGCGCCTAGCGAAAGCTGATGCTATGCAGCG
AGTGCTCAATATGCTGATACTCGCTCCGGCAGAAAGGGCGTGGCGTCGAC
GGGGCTTGATGGTCATGTGTCGCGCTTTAGCGATTCATGGTGGACATGCT
CGCGTGATGAGAGAGCTATTGCAGCACGGGGTTGATCCCATCCCGTGTAG
CGAATATACTTTGACCCCTCTGCAAATTGCTGCCAAATACAACCAGCCAG
ATGCTGTGGATGTGCTTATTGAGGCGGGAGCTAAAGTCGAAGGAGATGAG
GATAGTATCATCTATCCGTATGTCCCGCTGCGCATGGCCGCGGAAGGTGG
CTGCTGTGCTGCAATGCTTGCCCTATTGCAGCGCAAAGCCGATGTTAATG
CACAGGATATATCTGGGCGGTGGCCCTTGCATGCAGCCAGTAGAAAGGTG
CAACCGGAGGCGGTCGAGTTGCTGTTAAGATGGGGTGCAGACAAGACCAA
TGTCGACAATGGTGGCCAACGTGCTGCGGAGATGATCGGAGCAGGCCTTA
AAAAGAAGAAGCGCCTAGCGAAAGCTGATGCTATGCAGCGAGTGCTCAAT
ATGCTGATACTCGCTCCGGCAGAAAGGGCGTGGCGTCGACGGGGCTTGAT
GGTCATGTGTCGCGCT
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