mRNA_H-paniculata_contig5539.13022.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.090e-29 Identity = 106/302 (35.10%), Postives = 158/302 (52.32%), Query Frame = 1
Query: 4 LRVPLEHAAAEGEVE-------LVHSLVAA--GACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLK----RAHIECVDLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAV----ELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
+RV L+ A G V+ LV + VA+ VD+ D LH++ + E V LL GA + D +G TPLHL G+ + LL H + + L A G A V+R +LQHGVD ++ T L +AA N+ A+DVL+EAGA VE ++D P++ A C A LAL + A++ A+D+ G PL A+R+ + V ++LLR GAD+T ++ G+ AAE++G ++ ++RV ++L APA+RAWRRRGL+V+CRA
Sbjct: 50 MRVALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSD----QLHVSASQG-QEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWN-RSYSVLDFAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLD---ACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.990e-29 Identity = 107/301 (35.55%), Postives = 157/301 (52.16%), Query Frame = 1
Query: 4 LRVPLEHAAAEGEVE-------LVHSLVAA--GACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIEC---VDLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAV----ELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
+RV LE A G V+ LV + VA+ A VD+ D LH+A + E V LL GA + D +G TPLHL G+ + LL + + L LA G A V+R +LQHGVD ++ T L +AA N+ A+DVL+EAGA VE ++D P++ A C A LAL + +++ A+DI G PL A+R+ + V ++LLR GAD+T ++ G+ AAE++G ++ ++RV ++L AP +RAWRRRG +V+CRA
Sbjct: 1 MRVALEEAVDSGHVDESAVEPILVVAKVASLQYASVDSSD----QLHVAASQG-QEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTD-GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLD---ACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 112 bits (280), Expect = 6.010e-25 Identity = 112/329 (34.04%), Postives = 143/329 (43.47%), Query Frame = 1
Query: 1 WLRVPLEHAAAEGEVELVH-------------------SLVAAGACVDAPDFTVG--PLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDG----------RTPLLLAIHGGHARVMRELLQHGVDPIP--CSEYTLTPLQIAAKYNQPDAVDVLIEAGAK--VEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQP---EAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLA--KADAMQRVLNMLIL---APAERAWRRRGLMVMCRA 858
WLRVPL A G +LV +L++AGA V+ D G PLH A+ R + VV LL GA + D A G + +A GH V++ L+HGVD C T L AA NQ +AV+VL+EAGA VE S Y PL AAE A+ LL+ AD N D +G PLH A+ + P E V+LLLRWGA +T V+ G AE+ +RLA + DA + L+L APA+RAWRRRG +VM RA
Sbjct: 37 WLRVPLNCAVTSGNEDLVTRLLDTGGDVNRLDHLGRSTTLISAGADVNDRDPAEGCYPLHAAVRRGCDR-VVADLLAAGAAPNNTDGXXXXXXXXXXXXXXXXXXXXXXXXXAEFTFESCAGYVVIASEVFPNAEINVATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYD-TPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVF-------QRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRA 356
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 106 bits (264), Expect = 4.710e-22 Identity = 95/306 (31.05%), Postives = 140/306 (45.75%), Query Frame = 1
Query: 13 PLEHAAAEGEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVVQAL--------------LDRGACLHR-----RDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLD-GRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKV----QPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
PL+ AA EG V +L+ AGA DA + G AL + + + +D LH + G TPLHLVA G LL A + G + HG D +T L++A+ +++ A+DVL EAGA +E + PL +A++ G AA +ALL+ A V ++ + + PLH + K E V+LLLR GAD+T V G AA+M+ LK ++ + A+ + RV +L APA+RAWRRRG +++ RA
Sbjct: 410 PLQMAAGEGNVAATQALLDAGA--DASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGS----TPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVV--LKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5JYJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ2_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.470e-20 Identity = 92/312 (29.49%), Postives = 131/312 (41.99%), Query Frame = 1
Query: 1 WLRVPLEHAAAEGEVELVHSLVAAG-------ACVDAPDFTVG--PLHLALHRSTNEPVVQALLDRGACLHRRDNK-----------------GNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
WLR PLEHAA G +LV L+ AG + A G PL LA+ NE +AL+ GA ++ D K GN P+HL A G+D + L+ KR + CV+++ RTPL +A+ H ++ LL G DP L + E PL A G CAAML LLQ A+VN+++ G+ R A+ +++R A+ RAA + ++ V +L+ AP +RAWRRRG +V+ RA
Sbjct: 20 WLRAPLEHAAGTGNRDLVDKLLGAGLRRAGAGGDMKAKTLDTGHTPLDLAVVGG-NEAAAEALIMAGADMNVLDVKNDGLLHLTITGGHAGSNGNFPIHLPACYGFDEVALVLVQKRVDLNCVNIERRTPLYVAVRENHVSTVKVLLAEGADP--------NSLNLLLMXXXXXXXXXXXXXXXXXXDIERRTSRESTPLHATAAFGSCAAMLTLLQLGANVNSKENRGK------PRPKGKAAISVVIRCMAET--------RAASL--------------PRLEHVSELLVPAPQDRAWRRRGFVVLRRA 294
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 3.150e-20 Identity = 93/322 (28.88%), Postives = 135/322 (41.93%), Query Frame = 1
Query: 16 LEHAAAEGEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIEC----------------------------VDLDGR------TPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDS---IIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLH----AASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
LEHAA G L LV AGA +G A R + + + LL+ GA D +G TPL D++ R + L + GH +R L++HG D + + L A N+ +A+DVL+ AGA +S +++ R E A + LL+ ADVNAQ + G L A ++ E V+LLLRWGAD+T+V G RAA+ IG + ++ R+ + + V +L APA+RAWRRR +V+CRA
Sbjct: 38 LEHAAGRGHEHLTRKLVEAGA-------EIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEA---ATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIP--EEFEGVRKLLANAPADRAWRRRCSLVLCRA 347
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5JU40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 3.140e-19 Identity = 98/332 (29.52%), Postives = 138/332 (41.57%), Query Frame = 1
Query: 1 WLRVPLEHAAAEGEVELVHSLVAAGAC-------------------------------VDAPDFTVG-------------PLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDGRTPLLLAI---HGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGC-CAAMLALLQRKADVNAQDISGRWPLHAASRKVQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMC 852
WLR P E AA+ G++ L +L+ AGA +DA +F VG P+H A ++ E V+ AL+ GA H D+ G PL A+ G + + PLL A+ + R LLQHG D +Y + + N V +L++AGA V+G D PL A C + LL A+VN QD G LH + + V+LLLR GAD+T N G + A LK + +A + VL +L APA+RAWRRRG +++C
Sbjct: 35 WLRAPFERAASAGDIPLTMALMKAGASGDAFSSAALGTPATHNSRLLTALHHAAAGTKLDAMEFLVGSGADANGGALKWRPIHFATEANSPEAVL-ALVRHGADPHAEDSLGRPPLCCAADRG-NMXXXXXXXXXXXXXXXXHEVCPPLLFAVLSRSNNSEDMTRALLQHGADVNELDDYEIAINEAVRCGN---VVKLLLKAGALVDGHNDFHGLVLAPLHAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAVRFSSRLVDLLLRHGADETI--NNGDSSTPADCARLKAGHQ----EASRPVLRLLGGAPADRAWRRRGRVLLC 355
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 8.490e-19 Identity = 94/299 (31.44%), Postives = 136/299 (45.48%), Query Frame = 1
Query: 61 LVAAGACVDAPDFT--VGPLHLALHRSTNEPVVQALLDRGA---CLHRRDNKGNTPLHLVANLGYD-----CLLSPLLLKRAHIECV-------------DLDGRTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQDISGRWPLHAASRK---VQPEAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAM--------QRVLNMLILAPAERAWRRRGLMVMCR 855
L+ AGA V+ D GPL A+ ++ +V LL GA + R TPLH A G L SP K H+ V DLD + L+ A VM+ LL+HGVD + E PL AA++N + VL++AGA ++ + S + L AAE G A+LALL+R A+V+ G LH S + V++LLR GA + VD G+ ++ + ++R A M +R + +L APA+R WRRR ++M R
Sbjct: 122 LILAGADVNFVDRADKAGPLFAAVKAGCDD-LVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVD-VNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDV-KCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNGKAPVDLF---KRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLR 414
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5K4P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P5_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.380e-17 Identity = 91/302 (30.13%), Postives = 136/302 (45.03%), Query Frame = 1
Query: 37 GEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVVQALLDRGACLHRRDNKGNTPLHLVANLGYDCLLSPLLLKRAHIECVDLDG----RTPLLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAA------------KYNQPDA--VDVLIEAGAKVEG------DEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADV-NAQDISGRWPLH--AASRKVQP-EAVELLLRWGADKTNVDNGGQRAAEMIGAGLKKKKRLAKADAMQRVLNMLILAPAERAWRRRGLMVMCRA 858
GE +H +A +DA + LH A+ + A++ GA +D GNTPLH A D + LL + A + + +G R+PL A A + R LL++G D + + T L AA +N +A +D L+EA +E + PL +AA +A L RK V NA+ GR PLH + K+ + V+LLLRWGAD+T +DN G ++ + +++ + + ML AP +RAWRR G +VMCRA
Sbjct: 75 GERTALHGALADVGLLDAKGRSA--LHYAIEGGHLQLAGDAVIG-GADPKAKDIDGNTPLHFAAAYDDDKFVGTLLRRGAQVNAANNEGNLNERSPLFFA--HDQAAMTRTLLEYGADILSVDQLGFTALHAAAVEVFGYFSPRLLMWNAENAKVIDTLLEARVDLEARSVEFFEGSQRFRGLTPLHLAAYHQ--KVSMAELSRKGAVDNAKCDDGRTPLHMLCTNPKLNSWDTVDLLLRWGADETAIDNEGYTPEALV---------VGRSNRSRALRQMLDKAPEDRAWRRWGTLVMCRA 360
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Match: A0A6H5L2S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S0_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.670e-16 Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 313 LLLAIHGGHARVMRELLQHGVDPIPCSEYTLTPLQIAAKYNQPDAVDVLIEAGAKVEGDEDSIIYPYVPLRMAAEGGCCAAMLALLQRKADVNAQD-ISGRWPLHAASRKVQPEAV-ELLLRWGADKTNVDNGGQRAAEMIGAGLKK--KKRLAKADAMQRVLNMLILAPAERAWRRRGLMVM 849
L LA+ + +RELL G + E LT L +A + A+ +LI+ G+ ++ L AA GG A + AL+ R A+++A+ + G+ PLH A+ Q AV EL+LRWGAD+T +D G+ A++++G LK + A+ ++R+ ML APA+R W RR +VM
Sbjct: 131 LPLAVKHNYLDCVRELLTLGANVEAVDEIGLTALLVATRAGNVSAIGILIDLGSADVNSRGQTVW--TALHFAAHGGDPATIEALVTRGAELSARTTLKGKSPLHIAAGHAQTRAVQELVLRWGADETQLDGHGRSASDIVGV-LKNVFDRGAGHAEEVERIKVMLANAPADRRWNRRRDVVM 310 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5539.13022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5539.13022.1 >prot_H-paniculata_contig5539.13022.1 ID=prot_H-paniculata_contig5539.13022.1|Name=mRNA_H-paniculata_contig5539.13022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp WLRVPLEHAAAEGEVELVHSLVAAGACVDAPDFTVGPLHLALHRSTNEPVback to top mRNA from alignment at H-paniculata_contig5539:10938..11894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5539.13022.1 ID=mRNA_H-paniculata_contig5539.13022.1|Name=mRNA_H-paniculata_contig5539.13022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=957bp|location=Sequence derived from alignment at H-paniculata_contig5539:10938..11894+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5539:10938..11894+ >mRNA_H-paniculata_contig5539.13022.1 ID=mRNA_H-paniculata_contig5539.13022.1|Name=mRNA_H-paniculata_contig5539.13022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig5539:10938..11894+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |