mRNA_H-paniculata_contig5535.13018.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig5535.13018.1
Unique Name	mRNA_H-paniculata_contig5535.13018.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig5535.13018.1 vs. uniprot
Match: A0A6H5JTI3_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI3_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 5.550e-15
Identity = 74/182 (40.66%), Postives = 96/182 (52.75%), Query Frame = 2

Query: 1508 VLRQAETGKGAKLDPGSLGTAVEMCCHAGEIGHAQTIMAQLKSLAGSENADRWIVKTTASTDAYLGNAEAVSEPGAQQTDTYPGGDYVA--RHDVSCEGDTAGMHHNGAGQSQHETHSPGEPGDSRRGGPTTPVNGVSFSGEVHQIRRVGGLVGRGSKSEEAVRRRNADQEADCLVKLSHGG 2047
            VLRQ++  K +K DP SLG AVEMCC AG++ HA+ I+  L +LAG+E AD WI +T    +A +G+ EA  EP     +    GD +     D      T  ++ + A   +      G P  S+  GPT     V F  EVHQ+  +GG VG   K  EA RR   D   D LVKLSHGG
Sbjct:  656 VLRQSQQVKPSKPDPCSLGAAVEMCCRAGKLDHARAILPHLTALAGNEGADAWIRETMGIFNACIGDLEARDEPPINGNE----GDELRPPASDDKTIAITGDLNTHAASGEETNQQRRGRPKLSK--GPTE--RAVPFK-EVHQLHPLGGAVG--GKVGEA-RRLATDHAPDVLVKLSHGG 825

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5535.13018.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5535.13018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JTI3_9PHAE	5.550e-15	40.66	PPR_long domain-containing protein n=1 Tax=Ectocar...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5535	contig	H-paniculata_contig5535:3107..12990 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	95.9
Seed ortholog evalue	7.7e-17
Seed eggNOG ortholog	2880.D7FQT1
Hectar predicted targeting category	other localisation
EggNOG free text desc.	endonuclease activity
EggNOG OGs	KOG4197@1,KOG4197@2759
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-16_000625.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	15
Model size	3033
Cds size	2031
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930580.1701078-UTR-H-paniculata_contig5535:3106..3134	1622930580.1701078-UTR-H-paniculata_contig5535:3106..3134	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5535 3107..3134 +
1691481357.272944-UTR-H-paniculata_contig5535:3106..3134	1691481357.272944-UTR-H-paniculata_contig5535:3106..3134	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5535 3107..3134 +
1622930580.4706717-UTR-H-paniculata_contig5535:12016..12990	1622930580.4706717-UTR-H-paniculata_contig5535:12016..12990	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5535 12017..12990 +
1691481357.463562-UTR-H-paniculata_contig5535:12016..12990	1691481357.463562-UTR-H-paniculata_contig5535:12016..12990	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5535 12017..12990 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5535.13018.1	prot_H-paniculata_contig5535.13018.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig5535 3135..12016 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig5535:3107..12990+
coding sequence from alignment at H-paniculata_contig5535:3107..12990+

protein sequence of mRNA_H-paniculata_contig5535.13018.1

>prot_H-paniculata_contig5535.13018.1 ID=prot_H-paniculata_contig5535.13018.1|Name=mRNA_H-paniculata_contig5535.13018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=677bp
MSVMVYNKAIIAIAKSGRWQEATNLLEWMRRGALAPDVYSYTGCIDACAK
KGQWIKAIRLLDEMREVGVKANTYAYNAAINACAKAKIWQEALALLRQMK
REGVQINTATLNASIDACGNAGEWEKALRILERMRAKELPLHQRPNLRTL
NSAINACAQAAEWKSAISLLDQLRSGRGDEHGPVVLEADIVSYNAAMNGL
AKAGEWKKALALLREVVEDREKLKPDAISYNTAIHACGRVGEWELAKSLL
QEMRDLGLEPDVISFGTTANALGRAGQWGLLLNLMKEMSMAGHPPTEVAF
NAAIEACAKGDAWKDAVSLMEEMRLNGYVPTLLVLSSLIAACGRAETWEM
AIALLHESRRRGPHPTASVYLAAAHACAIAGKWQEGSDLLEPMKEDGIRP
NEKFYVALIRATGNGERSDVTLLLLKEMEKLGIEPGVRTWNTAVGACGKA
GCWHRGLMLLSEMHDRGMRPAGCAVASIIRACDAAGEWKKGLEVLRQAET
GKGAKLDPGSLGTAVEMCCHAGEIGHAQTIMAQLKSLAGSENADRWIVKT
TASTDAYLGNAEAVSEPGAQQTDTYPGGDYVARHDVSCEGDTAGMHHNGA
GQSQHETHSPGEPGDSRRGGPTTPVNGVSFSGEVHQIRRVGGLVGRGSKS
EEAVRRRNADQEADCLVKLSHGGTPL*

mRNA from alignment at H-paniculata_contig5535:3107..12990+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig5535.13018.1 ID=mRNA_H-paniculata_contig5535.13018.1|Name=mRNA_H-paniculata_contig5535.13018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9884bp|location=Sequence derived from alignment at H-paniculata_contig5535:3107..12990+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACTCCGCGAGGGCTGGCGGAGTGGAAATGAGCGTCATGGTTTACAACA
AGGCCATCATTGCAATTGCCAAGAGTGGCAGGTCAGTCACTTGACTTGAC
TTGACTTTGATGGTATTAACGTAAACGAATTGGCCCATAATTCTTGCTTA
CGATGAAGCTCATTCCTTAATATTGGTAGTAAGTTCTATCTTGATCTGTA
CCTGATAACTTTTGGTTTTATGATGATAATGATGGTGATAATGATAATAT
CCTTGCTTGATTAGCTTTGCTTTGACTTGCCTTTGTGGTGAATGTTGATC
GACCGAAGCTTTGCAATTATTGAAATTCCAAGATAATCAATCCATGCCTC
AGTGGAACAGCGATAAACGAGTTGGAGTACAGAAGCAGGAGTAGAGAGAA
TCAAGGAAGCCGCTTGAGGGTAGTGTAGTCTAGTGTATTGTGTTTGTGTT
TGTGTTGTATTTCCTCACTCGTGATTATGATGAAAAAAACTGAAATAAAC
TGTAATCTTCAGATGGCAAGAAGCGACGAACTTATTGGAGTGGATGCGGA
GGGGTGCTTTGGCACCAGACGTGTACAGCTACACGGGGTGCATCGACGCC
TGCGCGAAAAAGGGACAATGGATTAAGGCTATTCGATTACTCGATGAGAT
GCGAGAAGTGGGCGTCAAGGTGTGTTTTATGTGTGGGTCTGGGTGTCGCT
CTTACTTGTTGCTTGTCCCCTGTATCTGTATCACGTTTTGATGTGGTATT
AATTCATGAAGAAGAAGAATGTGGCGATATTGAAATACCGGATAGGGTAG
TCAGTCGTCAACTCACGGCAGTACTCTAGAGAGTCTTAATATCCAATATC
CATGTATCTGCTTGCTTCTTCGACATCTCATCTCAGGCAAATACATACGC
GTACAACGCAGCAATCAATGCATGCGCTAAGGCCAAAATATGGCAGGAGG
CTCTTGCGCTGCTGCGACAGATGAAGCGGGAAGGCGTCCAAATCAATACC
GCAACGTTGAATGCTTCCATCGACGCGTGAGTATTGCTTGTTGCTTTGGG
CAGTACAGTCAATTTTGGTACATGATATGTTGCGTTTCTCGCAGTATATC
GTCACTCGTACCAGAGGTTACTCTAGATTTCAGTTGTGCTACACCCCCCA
CACCCCCCGTACGTCATGCATTTAACATTCTTTCAAGTGTGTCTTTCGCA
GATGAGGTGCGTGGATGATCTGAATGATTTGTTTCTATTAGGTCTTTTTA
TCCGATTGAAGAGGAGTCAAGTCCATTTGTCCAAATGAGTGGGCAGGATT
GATTGTATCTCGGTAATCTGACGCCAAGTAAAGTAAATGCCTTTAAAAAT
AAGCCCATGTGCGAGGAGCGCACCACAAAGCATTTGATGTGGTCTCAGAC
AGAGACGTCTCTGGACAGTTCACGTTGTTGTGTGAGACCTTTACCGTCTA
AGCGAGGACTACTGGGCCGGCTTAATCCGTGTACCCACCTCAGCGTTGGT
TGGTGATGTGGTATTCTTGAGCTGTTCATTGCCATGGATGGATTCCTTAG
ATTTTGACTCTGACCTTGGGCTACCTTGGATTACCTTGGATTACAGGTGT
GGAAACGCTGGTGAATGGGAAAAGGCACTAAGGATTTTGGAACGAATGCG
GGCGAAAGAGTTACCGCTGCATCAACGTCCGAACCTTCGAACGCTCAATA
GTGCCATCAACGCGTGAGTGAATTTTCTAAGCTTGCCGAAATTGTGTACA
AAAACCGAGCGTTGTCATTATTTTTGGGCTGCCAGGCTGCATACGTATAG
TTCTATGTGCCGTACGCTTTTTAACTTCGTTTGTAAAAAATGGCGGGGGT
AACCAACCGTCTTGATTCTTGTTGATGAGGATGATGAAAGTTTCCCGTAC
GAAAGTATCAAATCAAGTCAAATTAAATCAAAATTTCTGATGGTAAAGTT
TCTGTATCTAGAGTTGTCTAATTCCACTTTCTAATTCACTGCTGACACTC
ACATGCCTACATGAACGACGTTGTGACAGCGGTTGCCCTTGCCCCCTGAT
CATTGCTTTGTATCCCTGTGAGTCCTTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTCTACCTGTGTTTTTATTTTGAAATCTTCCAAATACACATTC
CTTTATTAGTAACTAGCTGTAAACGGCCCCACTAGCATGTCTTGAAAGCT
TCCCTTGTCCCTGGGGAGGGCGTGGTTGTTGATGGTCCGCTTGGTTATTT
TTCGCGTACATGGTATGTCACTTCCAGCTGTGCCCAGGCGGCAGAGTGGA
AAAGTGCCATTAGTCTCCTGGATCAGTTGCGATCGGGCAGAGGCGATGAA
CACGGGCCGGTAGTGTTGGAGGCAGATATCGTGAGTTATAACGCGGCAAT
GAACGGCTTGGCCAAGGCGGGGGAATGGAAGAAGGCGTTGGCATTGCTTC
GGGAAGTCGTGGAAGACCGGGAAAAGCTAAAGGTGAGAGCGGACAAGGAT
CTCGCTCGACACGATGCACAGCCTTTCTAGCACAGTACAGTACAATACAG
TCATGGGTAATGCTTGCTGTCGTGGGGTGTTTCGTCAATTCTCCAGATGT
TATCTGATGTGATGTATGCTTTGACTTGTTTGGGTTACCGCGTCTTGTTA
ATGTGGGCAATTTAGCATCTGTAGTAATCACTCAGAAACAAATTCATGCC
TGTATAGTAGTAGTTAGCACTTGAACAAGAGTCAGTCAGTGATGTCTGCA
TAGAGCGCTAAAATGATGTTTCGGTAGAAATTGCTTGATGGTGTCGCGGT
ATGATGAAGCGTCCATATATTGTGCCAACATGTGTGGATGGACTGTTTTG
TATCTCCGCAGCCGGATGCAATATCTTACAATACGGCCATCCATGCCTGC
GGGCGAGTGGGCGAGTGGGAGCTGGCGAAATCCTTGCTGCAAGAAATGCG
GGATCTTGGGCTGGAACCGGATGTTATCAGTTTTGGGACTACGGTGAGCC
TCCTCGTTTTTTGGATTCAGACTTGCCTTTTGTGTTAATACGTGGCGCGT
ACCCTAAGCCCGCTCGCTAGACCACTGCGGATGAAAGTCAAGTCAAGTCA
AGTGTGTGCAGTTGCTCTTCATTTTGATGCCGGACACGTTCGTTTTTGTT
GCATTTATTTGAAATAGCAGTATTAATCTAGTAACTACACCCAGTTCCAG
ATTTGACCCTTGTTCATGTTGTTTGCTTTGTATTCCCCCAAGTGTGTTGT
CCTCTAGATATGTGAGAGGTGTTTCGGATGCTGGTGACAAGACATGTTGC
CCGTGTTGACGATGCATGCCATGTGACGAATATATACACACACATACACA
GGCTAACGCTCTCGGACGGGCTGGACAATGGGGACTACTATTAAATTTGA
TGAAAGAGATGAGTATGGCGGGTCATCCTCCAACCGAGGTGGCGTTCAAT
GCTGCCATCGAAGCGTGCGCGAAGGTGAGTAGGTGGGCACTGGTGTTTGT
CCTTGCTGTACATTGTCCTTTTTTTTGTTTAATCCTCTCCCTCCCCCAAC
ATTGTTTGTACTGCATGGCGCTTATGCTCATGAATTTTTCGCTTTCCACC
GTCGTAATGCAGCATTTCCCGTTATTCCGTCACATGCGCAGTAGACGCAA
GGATCAATGGACTTGTGTCATGTGACATTTTTTGCGATGGCCGCCACTCA
ACGTCTGCGATCGTGTCGCCTGCCATAGTTGATCACATGCGCTCGCCCAT
CTTCCAGTATTTCTAAGTTTGTGCCATGTGAAAGTTGGTTTTATTAGTAA
TGGTATATGGTGTCTGTGGTGTGTGTACAAGTACAATGACGTTGTCTCTC
TACTAACAGTCATTTCATGACAAGCTATTACCAGGTAAAGGCTCATGTGT
GGTGGGTCGGTCACATTATCATGTACATCAAGGAAAAGTTAGTCTTGCTA
ATTTCTCATCCTCAATTCCCCGACGGACTGGACCTTTTGACTTACCTCAT
CTGAACGGCCTTATGTACTCAGGGGGATGCTTGGAAAGACGCCGTGTCGT
TGATGGAGGAAATGCGCTTAAATGGATATGTACCTACTCTGCTCGTGCTG
TCTTCACTCATTGCTGCGTAAGTTCTATCCCCTCACTGGTGAAGTAGAAA
AAAAAGCGGTGTGCGTTAGCTTGATAATCGTTTGTCCAGGTCATTTTGCT
AATAGGCAAGCTAACGGTGTTTGCTCTAATAGGGTGTTGTCCATAACCAG
CAGCCAGAATGTTTTTAGTATTCATCTTTTTGTGATGATCTATACTTGAG
CTATGCAGGACTGACTCAATAGTTAAAGCGAACACGTACATAACGGCCTG
AATAGCTAGCTGCCCAAGTAGCTCTAGTGTAACAGTGCAGGATCTAGTGT
CCAGTATCCAAGAACAAGCAGGTTTGTTTTGTTGGAAGCTTGATGCTAAT
GCTCCACATGCCACAGATTTATCATTTGTCATTAGCCAAGAAGGAGTGGG
GCTGTATGATGAGTTGGATGTAACATGAGCTTCGCAGGCCAAAATGCAAA
CGGTATCCCTGGCAAATAAATATCGCCTGGTGGATCCGTGCATGTCATAT
GGAAACGCAGTCGAGCTCTCGCGTCGTTCGCATCTCTCTATCTTCCCTCT
TTCGAGCAAGGCACTAAGTCGATGAAATAGGTGGACGTTTATGGTGCTCT
TACTGTTGTTGTTCCTGTTGCTATTGGCCAGGTGCGGAAGGGCTGAAACC
TGGGAGATGGCGATAGCCCTGCTGCACGAGTCTCGACGTCGCGGCCCTCA
TCCCACAGCATCAGTTTACCTTGCTGCTGCTCATGCGTGTGCCATTGCGG
GGAAATGGCAGGAGGGCTCCGATTTACTCGAGGCAAGTGAAATGAAGTGA
AGTGAATGACACATAGCACCAGTTGTAGCCGTCGATATCCTTTTTGATGC
TCTTTGCTTTTGCTTTTTTCTCTTTGCTTGTAAAATTATCCATCCTTGTG
TGGCTGTGTGAGTCCTGTTTGTACTGCGTGATTGGTTATTTACAGTAGTT
CGTTTTTGGGTGAATGCGATAGATGTAAGAACGTGGTTCCTCAAGATAGC
GATGAAGTCTTGAGCGACCATATCACGGCCCGGCAGCGTAGTATCACTAG
TTATGTGTCTATTGTTTGTTTTTTCCACTTTATAAAGGATTCAACGTTCA
TCGAGGCTTTTCCGTGGAAGGTTTTCTCACTTGACTCGGCCTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTCCCTCCGCTGGTCCGTTTCCC
TTACTGGTGACATTGGTCTATTGGTGTGTGACTGTTGGTGAAGCAGCCTA
TGAAGGAAGACGGCATTCGGCCCAATGAAAAGTTCTATGTCGCTTTGATA
CGAGCGACGGGAAACGGAGAGCGTTCGGACGTGACGTTACTCCTATTGAA
AGAGATGGAGAAATTAGGCATCGAGCCAGGCGTTCGAACCTGGAACACCG
CCGTGGGGGCGTGTGGCAAGGTATGTAGGCATGGATGGGTGAATGGATGC
GTTATGAAACGAATGGTTGGTTCGCCACATTGATTATAAGTTGGCCTTGT
CTTTGCTCACTTTGTTTTGCTGTTTATGTCAGTTTTTGTTGAAAGCTAAT
TTACAAACTCTGCATGTGTGGTACCGTTGCGAAAGTGACTACTACTGTAT
TACCCTGACACAGTGTGTGGCGTGCCCATCTCCTGTAGGAGATGGTAATG
TAACTGGGATCTGGATCCGTCAGGCATGTATCTAATGACTTCTTCTTCTT
GACAATTTAGGGAAGTTTTTGTTGATTGCTCAATGTCGTCTGGAGATTAT
TTGTGGAGTTTGACATCTGATGGCACGTTGCATCCCTTCCTACAAATGTA
TGCCCCCCGCGTCCTTCGAAGGCGTTCTCAGTCAGAGCCTGCTTGCCCTC
AAAAACAGGTGAGTTACCATTACATTAATCCAGTACGTGTCCACATTGTG
CGATCGATATACCTTGTGAATACCTTCACGTGGTTACTGAAGGAATTAAT
TGTGTCCCATTTTGTGTCAGGCTAGTACATGAACAAGCAAGTTTGCTTTG
CCTTTCCGTCAGGGCGTGATCTACGGCACATGACAAGGTGCCTCAGTTAG
CGAACGGCTGCTTTATATTCCATCTTGTACTGTATGTTGTACTCAATTCT
CATGTCCGCAACAGGCGGGGTGTTGGCATCGTGGCTTGATGCTGTTATCG
GAAATGCACGACCGGGGAATGCGCCCGGCAGGGTGTGCGGTGGCGTCCAT
CATCCGTGCGTGTGATGCCGCGGGAGAGTGGAAGAAAGGGCTAGAAGTTT
TGCGGCAGGCGGAGACTGGAAAAGGAGCCAAACTGGATCCAGGCAGCCTG
GGCACAGCGGTAGAGATGTGCTGCCACGCTGGAGAGATTGTGAGTGTTGG
TTTATATTTTTAAAGGTTTAGGGTAGGTGGGTTGCAAATTTAGGCCGCAG
AGTGGAGCAGATCGTATAGATCTAGATACGTGTACATGGTATGTATATGG
TGGAGATTACTACTATTAGAGTCTCCAAGGAGGTGCATGGTAATATGGAT
GACACAGCACATTACTCTACTTTTAGGGCTTTTGATGTTGATTAGTGTTG
ACACTTTTCCTCACAAGAGGAGATATAGTAGCTCAAACTGGTGAGGGTTG
CGTGGGGCAGCCGAGCAAGTCCCTCGATTATGTGCTTGGGTGTTCTTGTT
CCGTCGATACATGACAAATAATGTGGCGAAAAGTCCTCGTGCGCATCCCT
ACGCGTGGATAGCCTTGATGTTCAGTTAGTGTCTCATTAGTGTCGTGAAT
CTCATTGACGTTTCATACACACCTATTTCTCCATTTCCGCAACGACGCAA
CGAGGAAGGGGCACGCGCAAACAATCATGGCCCAGTTGAAATCGTTGGCA
GGGAGCGAAAATGCTGATAGGTGGATAGTCAAGACTACTGCTTCAACTGA
TGCATATTTAGGTGAGGATGACAGTGATGGTGATGGTGAGGGGGTATGCC
CAAGGTCGTTTGCCGTGTTCCCGACGGCTTAAGTGCTTGCTATATCAACA
AAAATTGGATTCGGTCATGACGCTATATCAACGAAAATTGGGCTAGCGTC
TGTGTGTCGTCAATGTGAATATCTTGATGTTGTAACCTGTCGTCTGTTTC
ATAATATGACCAAAACGGTTCGTCTTCTGCGGTTATCTCTGTTAATACTA
CGGTATTGCTGTTATCATTTTCAGGTATTCTAATCTAGTCTGGTCTAGTA
TTACGGTAAGTGACAGTATATTGACTTCTATATATGTATATGTATATGTA
TATGTATATGTGACGTTTCAGTCGCCATTGGAGGGGTAGCAAGAAAAACA
TAGTATATTTTCGTTGTACGAAGATTGATTGATATTCTTCTTGTGGTCCT
TTCTTGAGCGCCTGGCTGTCTTGTCTCCGGTCTCTGGTCTCTATTTATCA
CAATGGTGATGACGAGCAGGAAATGCGGAGGCCGTTTCCGAACCGGGAGC
ACAGCAAACCGACACGTACCCAGGCGGCGACTACGTGGCACGTCATGATG
TTTCCTGTGAAGGTACATGGGATTTCGGTGGTTGAAGCTGCCAATCTAGT
TTCTCGCTTCATGATTTGAGATTTGACTGGATGAATAAAAAAATATGCAC
ACGACAAAAAATGTGCCTCTGAACAAATGGGTGATGAGTGTTGCCTGATT
ACGCTACATGTCTGTTGAATAACAAAGCTTCAGACTGTTTAGATCTCTTG
GCTGACCGAACATTAATGATTTATGTTGATCGGTTTGTCTTTTTTGGGGG
GGGGGGTACAAGTCAAAAGGTAAATACGGCAAAAATTCCATCTTGTACCC
GGTGTTTAGAACGCCATGGATTTACATGAATGTAGCAACATCTTACCTTG
AAAAGCTTCAGGGTTGATAGCGACTTGCGACATTTAAACCTGCGACGTAA
AATGTACGTTACGATTGTACCCATTACCGCAATTCTTGTTCAATATTCTA
GGAGATACAGCAGGCATGCATCACAACGGTGCAGGACAATCGCAGCATGA
AACACATTCTCCAGGCGAACCCGGCGATTCGCGGCGAGGCGGTCCAACAA
CTCCTGTCAACGGGGTTTCTTTTTCAGGGGAGGTGATAAAAAAAGGCAAA
AAAACACGCACAACGCAAAGTTGCTCATGTAACAGAAGACTGTTGATGTA
ACGTAGACTATTCTCAACTGTTGTAACTTTTGTCTTCTGTTGGATATACG
GGTATATCGTAGGAGAGCTTTTATTGTCTGCACAATTTAACGTCAGAGCC
GTGGAGAGACTGTTGGAAAATTACCCAGTTACATGTTTTACTTTGTATAT
TGGCAACCGACAATATGAAACGCCACCAGTCTCTTGCTTATTATCGACCA
CAGCCAGCCCACATAAATACCGTCACATGGCATTATGATGCAGCTAAAGG
TTCTCCTTTCTGGGAGTACGAAATTCGATATTTGTAACAAGGATCAAGAT
GGTGTTGACTTGAATAAATAGGAGCTCTCTCTGTCGATTGTCCTTCTTGT
CTGAGATTGCAAGGATGCTCGCCGTGAACAGTCTAGCCTAGCATAAGCAT
AGCATAACCGCCAAATGCTTAGCTTAGTCGCTTGGTGATGTTGTGTTATT
GCTTCGATTTTCGTCAAATGAATTTATTATTAAATCTATCAACTCATCAT
AAATTCGTTTATTCCGTTTGCCGTCAAGGTACACCAAATCCGTCGTGTCG
GGGGTCTTGTCGGGAGAGGTAGCAAGAGCGAGGAAGCTGTCAGGAGACGG
AATGCAGATCAGGAGGCAGATTGTTTGGTCAAGCTGTCGCACGGTGGAAC
TCCTTTGTGACCTTCGTGATCTTGCTGTGACCTTCAATTAAATTCTACTT
TTGTACCGTACTCTGCCTTGCCTTGCGTTGGTTTGGAAATGATGAGTGCG
TGGCTTTTGGGCTATTGTGTATATTTTGGGTGGTTCGGTCAGTGCTCGTT
AAATCCGATCTTTTGACCAGAAGTACCCTTGGCTTGTTTTCCAAGACTTG
ACTCCGAGGGGGATATTGATTGATAGAGTTGTGCGTTTTGGTGACTGGCT
GCATGAAGGGTTGATCTAAATAACATTTTTTTTATCATGTCACACTGATG
GTTCCTGGTGTGTGCCTCTTGGGCGACGACCGTAAACGTTTGATTCCTTT
GCTATACCGGTAACTATTTAAACAGGTTTTGTGTCCAGGTAAGAACAGAA
AAGTGTAAATTTTGACAACGCTGGTGTCATGATGCTTGAGTTAGATGGAG
ATTTTCACAAAGGCATTTTCACGAAGGCGTGATTGCTTGCTTGTATGCTG
TATTGTAGTGTCTAGATTTACGATGAGCATGAGCAAGTCATGGCTTTATT
GGTAACTCTCTTCTATGTTACACTGTAAACATGTGTCATGTAGCATCCTG
CATACAAGCATCTCTCCCGCGTGATGAGCTGTAAGTGGCGCTGTTCCACC
ACGCGTGGGTGGGTCCATGGGGCTCCCACCTGGTGGCTGTCCTGCTCGTA
GCTTTACTCTACTACCTACACCCCAGTGAGTAATGAACGAGCTTGTTGAG
TAGCCAAAACTGTACATGTACTCATAGAATACCATTTGTCATCCAAGTAG
AGATTAGATCAACAGTCGAAATCATGACCTGGATGGAAACGAAAGACTCG
TCGTGGACACGAGAATCGAGGAGAATGCGCCGGATGCCCCCACATACCAT
AAGTATCTCCTTCATGTGAACGGATAGATATGGGAAAAACAATCCAATGA
CGAATGGGATATCAAGAAGGGAAGTTGCTGAACC

Coding sequence (CDS) from alignment at H-paniculata_contig5535:3107..12990+

>mRNA_H-paniculata_contig5535.13018.1 ID=mRNA_H-paniculata_contig5535.13018.1|Name=mRNA_H-paniculata_contig5535.13018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4062bp|location=Sequence derived from alignment at H-paniculata_contig5535:3107..12990+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGTCATGGTTTACAACAAGGCCATCATTGCAATTGCCAAGAGTGG
CAGATGAGCGTCATGGTTTACAACAAGGCCATCATTGCAATTGCCAAGAG
TGGCAGATGGCAAGAAGCGACGAACTTATTGGAGTGGATGCGGAGGGGTG
CTTTGGCACCAGACGTGTACAGCTACACGGGGTGCATCGACGCCTGCGCG
AAAAAGGGACAATGGATTAAGGCTATTCGATTACTCGATGAGATGCGAGA
AGTGGGCGTCAAGATGGCAAGAAGCGACGAACTTATTGGAGTGGATGCGG
AGGGGTGCTTTGGCACCAGACGTGTACAGCTACACGGGGTGCATCGACGC
CTGCGCGAAAAAGGGACAATGGATTAAGGCTATTCGATTACTCGATGAGA
TGCGAGAAGTGGGCGTCAAGGCAAATACATACGCGTACAACGCAGCAATC
AATGCATGCGCTAAGGCCAAAATATGGCAGGAGGCTCTTGCGCTGCTGCG
ACAGATGAAGCGGGAAGGCGTCCAAATCAATACCGCAACGTTGAATGCTT
CCATCGACGCGCAAATACATACGCGTACAACGCAGCAATCAATGCATGCG
CTAAGGCCAAAATATGGCAGGAGGCTCTTGCGCTGCTGCGACAGATGAAG
CGGGAAGGCGTCCAAATCAATACCGCAACGTTGAATGCTTCCATCGACGC
GTGTGGAAACGCTGGTGAATGGGAAAAGGCACTAAGGATTTTGGAACGAA
TGCGGGCGAAAGAGTTACCGCTGCATCAACGTCCGAACCTTCGAACGCTC
AATAGTGCCATCAACGCGTGTGGAAACGCTGGTGAATGGGAAAAGGCACT
AAGGATTTTGGAACGAATGCGGGCGAAAGAGTTACCGCTGCATCAACGTC
CGAACCTTCGAACGCTCAATAGTGCCATCAACGCCTGTGCCCAGGCGGCA
GAGTGGAAAAGTGCCATTAGTCTCCTGGATCAGTTGCGATCGGGCAGAGG
CGATGAACACGGGCCGGTAGTGTTGGAGGCAGATATCGTGAGTTATAACG
CGGCAATGAACGGCTTGGCCAAGGCGGGGGAATGGAAGAAGGCGTTGGCA
TTGCTTCGGGAAGTCGTGGAAGACCGGGAAAAGCTAAAGCTGTGCCCAGG
CGGCAGAGTGGAAAAGTGCCATTAGTCTCCTGGATCAGTTGCGATCGGGC
AGAGGCGATGAACACGGGCCGGTAGTGTTGGAGGCAGATATCGTGAGTTA
TAACGCGGCAATGAACGGCTTGGCCAAGGCGGGGGAATGGAAGAAGGCGT
TGGCATTGCTTCGGGAAGTCGTGGAAGACCGGGAAAAGCTAAAGCCGGAT
GCAATATCTTACAATACGGCCATCCATGCCTGCGGGCGAGTGGGCGAGTG
GGAGCTGGCGAAATCCTTGCTGCAAGAAATGCGGGATCTTGGGCTGGAAC
CGGATGTTATCAGTTTTGGGACTACGCCGGATGCAATATCTTACAATACG
GCCATCCATGCCTGCGGGCGAGTGGGCGAGTGGGAGCTGGCGAAATCCTT
GCTGCAAGAAATGCGGGATCTTGGGCTGGAACCGGATGTTATCAGTTTTG
GGACTACGGCTAACGCTCTCGGACGGGCTGGACAATGGGGACTACTATTA
AATTTGATGAAAGAGATGAGTATGGCGGGTCATCCTCCAACCGAGGTGGC
GTTCAATGCTGCCATCGAAGCGTGCGCGAAGGCTAACGCTCTCGGACGGG
CTGGACAATGGGGACTACTATTAAATTTGATGAAAGAGATGAGTATGGCG
GGTCATCCTCCAACCGAGGTGGCGTTCAATGCTGCCATCGAAGCGTGCGC
GAAGGGGGATGCTTGGAAAGACGCCGTGTCGTTGATGGAGGAAATGCGCT
TAAATGGATATGTACCTACTCTGCTCGTGCTGTCTTCACTCATTGCTGCG
GGGATGCTTGGAAAGACGCCGTGTCGTTGATGGAGGAAATGCGCTTAAAT
GGATATGTACCTACTCTGCTCGTGCTGTCTTCACTCATTGCTGCGTGCGG
AAGGGCTGAAACCTGGGAGATGGCGATAGCCCTGCTGCACGAGTCTCGAC
GTCGCGGCCCTCATCCCACAGCATCAGTTTACCTTGCTGCTGCTCATGCG
TGTGCCATTGCGGGGAAATGGCAGGAGGGCTCCGATTTACTCGAGGTGCG
GAAGGGCTGAAACCTGGGAGATGGCGATAGCCCTGCTGCACGAGTCTCGA
CGTCGCGGCCCTCATCCCACAGCATCAGTTTACCTTGCTGCTGCTCATGC
GTGTGCCATTGCGGGGAAATGGCAGGAGGGCTCCGATTTACTCGAGCCTA
TGAAGGAAGACGGCATTCGGCCCAATGAAAAGTTCTATGTCGCTTTGATA
CGAGCGACGGGAAACGGAGAGCGTTCGGACGTGACGTTACTCCTATTGAA
AGAGATGGAGAAATTAGGCATCGAGCCAGGCGTTCGAACCTGGAACACCG
CCGTGGGGGCGTGTGGCAAGCCTATGAAGGAAGACGGCATTCGGCCCAAT
GAAAAGTTCTATGTCGCTTTGATACGAGCGACGGGAAACGGAGAGCGTTC
GGACGTGACGTTACTCCTATTGAAAGAGATGGAGAAATTAGGCATCGAGC
CAGGCGTTCGAACCTGGAACACCGCCGTGGGGGCGTGTGGCAAGGCGGGG
TGTTGGCATCGTGGCTTGATGCTGTTATCGGAAATGCACGACCGGGGAAT
GCGCCCGGCAGGGTGTGCGGTGGCGTCCATCATCCGTGCGTGTGATGCCG
CGGGAGAGTGGAAGAAAGGGCTAGAAGTTTTGCGGCAGGCGGAGACTGGA
AAAGGAGCCAAACTGGATCCAGGCAGCCTGGGCACAGCGGTAGAGATGTG
CTGCCACGCTGGAGAGATTGCGGGGTGTTGGCATCGTGGCTTGATGCTGT
TATCGGAAATGCACGACCGGGGAATGCGCCCGGCAGGGTGTGCGGTGGCG
TCCATCATCCGTGCGTGTGATGCCGCGGGAGAGTGGAAGAAAGGGCTAGA
AGTTTTGCGGCAGGCGGAGACTGGAAAAGGAGCCAAACTGGATCCAGGCA
GCCTGGGCACAGCGGTAGAGATGTGCTGCCACGCTGGAGAGATTGGGCAC
GCGCAAACAATCATGGCCCAGTTGAAATCGTTGGCAGGGAGCGAAAATGC
TGATAGGTGGATAGTCAAGACTACTGCTTCAACTGATGCATATTTAGGGG
CACGCGCAAACAATCATGGCCCAGTTGAAATCGTTGGCAGGGAGCGAAAA
TGCTGATAGGTGGATAGTCAAGACTACTGCTTCAACTGATGCATATTTAG
GAAATGCGGAGGCCGTTTCCGAACCGGGAGCACAGCAAACCGACACGTAC
CCAGGCGGCGACTACGTGGCACGTCATGATGTTTCCTGTGAAGGAAATGC
GGAGGCCGTTTCCGAACCGGGAGCACAGCAAACCGACACGTACCCAGGCG
GCGACTACGTGGCACGTCATGATGTTTCCTGTGAAGGAGATACAGCAGGC
ATGCATCACAACGGTGCAGGACAATCGCAGCATGAAACACATTCTCCAGG
CGAACCCGGCGATTCGCGGCGAGGCGGTCCAACAACTCCTGTCAACGGGG
TTTCTTTTTCAGGGGAGGAGATACAGCAGGCATGCATCACAACGGTGCAG
GACAATCGCAGCATGAAACACATTCTCCAGGCGAACCCGGCGATTCGCGG
CGAGGCGGTCCAACAACTCCTGTCAACGGGGTTTCTTTTTCAGGGGAGGT
ACACCAAATCCGTCGTGTCGGGGGTCTTGTCGGGAGAGGTAGCAAGAGCG
AGGAAGCTGTCAGGAGACGGAATGCAGATCAGGAGGCAGATTGTTTGGTC
AAGCTGTCGCACGGTGGAACTCCTTTGTGAGTACACCAAATCCGTCGTGT
CGGGGGTCTTGTCGGGAGAGGTAGCAAGAGCGAGGAAGCTGTCAGGAGAC
GGAATGCAGATCAGGAGGCAGATTGTTTGGTCAAGCTGTCGCACGGTGGA
ACTCCTTTGTGA