prot_H-paniculata_contig5485.12949.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5485.12949.1
Unique Nameprot_H-paniculata_contig5485.12949.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length100
Homology
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BLAST of mRNA_H-paniculata_contig5485.12949.1 vs. uniprot
Match: D7FMF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF8_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.990e-22
Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 0 
Query:    2 LVFRPWYWFFSSFRIRNFIVVSLDDNGLIKSHTDHWSIASLIEAKVGWVYRAARRAFGVATSMIVGWVIKE 72
            +VF+P  W FSSFR++ F VV +  +GL++SHTDHWS+ASL+E K+GW+YRA RR FG  TS++ GW+ K+
Sbjct:   95 MVFKPKLWPFSSFRLKCFTVVVVGSDGLVRSHTDHWSVASLLETKIGWMYRAGRRLFGAVTSVLFGWLTKD 165
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5485.12949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMF8_ECTSI2.990e-2256.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5485contigH-paniculata_contig5485:2706..7868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5485.12949.1mRNA_H-paniculata_contig5485.12949.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5485 274..9204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5485.12949.1 ID=prot_H-paniculata_contig5485.12949.1|Name=mRNA_H-paniculata_contig5485.12949.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
MLVFRPWYWFFSSFRIRNFIVVSLDDNGLIKSHTDHWSIASLIEAKVGWV
YRAARRAFGVATSMIVGWVIKEKAANAPRAIACESKADTDSTNTRLKAS*
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