prot_H-paniculata_contig5482.12947.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5482.12947.1
Unique Nameprot_H-paniculata_contig5482.12947.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length301
Homology
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BLAST of mRNA_H-paniculata_contig5482.12947.1 vs. uniprot
Match: D8LTN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN6_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 3.000e-24
Identity = 92/146 (63.01%), Postives = 106/146 (72.60%), Query Frame = 0 
Query:   60 PPVGVVVGAGAAGALAGHLVFHSLLISVGLGVGAMGVAASADGNAGEIARSSGRMALAAFERTKEVNERYHLTERLAEGIQSAARGFREFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKAGNAVSDGLDKLAKVLEPPKPSS 205
            PP+  VVGAGA G LAG LVF SLLIS GLGV AM +AAS+   AG+IARSSGRMA+AAF+R  ++NERYH TERL  G +      ++F        XXXXXXXXXXXXXXXXXXXXXX   AG A++ GLDKLA+ L PP PSS
Sbjct:   55 PPIREVVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVVHXXXXXXXXXXXXXXXXXXXXXXXXXAGEAMTSGLDKLAEALTPP-PSS 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5482.12947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTN6_ECTSI3.000e-2463.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5482contigH-paniculata_contig5482:4428..7251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5482.12947.1mRNA_H-paniculata_contig5482.12947.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5482 772..7867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5482.12947.1 ID=prot_H-paniculata_contig5482.12947.1|Name=mRNA_H-paniculata_contig5482.12947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp
MHGLQPSPPLMPPAPSLVAAAVSDGLAMYCPGVFIRGGSTYDYSQPPTTN
SPPVDHGGYPPVGVVVGAGAAGALAGHLVFHSLLISVGLGVGAMGVAASA
DGNAGEIARSSGRMALAAFERTKEVNERYHLTERLAEGIQSAARGFREFD
EEHAVVHNATEGVKQAWRDLRQFDEEHQLTTKAGNAVSDGLDKLAKVLEP
PKPSSSSNRARDGRMTGGVYTSIGEHSRSRSGGGGIENENSNQQQPRQQQ
QQHHGPRSRVEDQQTTQQQPSQSSVPPWGRVDGDADEVRDWWGEDPGWRQ
*
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