prot_H-paniculata_contig5481.12946.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5481.12946.1
Unique Nameprot_H-paniculata_contig5481.12946.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length372
Homology
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BLAST of mRNA_H-paniculata_contig5481.12946.1 vs. uniprot
Match: D7FQF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF3_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.270e-22
Identity = 84/233 (36.05%), Postives = 114/233 (48.93%), Query Frame = 0 
Query:    1 MCNSAEVARGFISGSSSTAVIEKLSCMLRSSNMWAQADAVGCLGWLVGNGMPSHTLQKLIPAVTLLLSKHNGCSLGLSDCNGGEGRTQNIGDGRRGQGDRQRVEDAER----RQEVALERMDNLRVYSLIFLLKATNADPSTMPMMLANEALDLLLEILSMANLNYLTRENPNPEHAIPCGERVDDEPTIDDQNPSLVLTAKLLGAFSLEPVCGAFLLQAKCVPKLLGFRKRL 229
            +C S EVARGF +  +S+AV+++L  MLRS + WAQADA GCLGWLVG       L +LIP VT L+ +H      +      +   Q +    R    R            +++ A ERMDN+RVYSLIFLLK   AD                      A   +  R +    +A   G         D   PSL+L A+LL A SL+P   + LL+AKC+P L+  R++L
Sbjct:   45 LCMSEEVARGFTAAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWLVGTLAGGTALHELIPLVTRLMVRHTTKDDEVFISEERQREQQAVWGRSRSSNSRGXXXXXXXXXXDKEDQARERMDNIRVYSLIFLLKKQEADSVR-------------------ARGVFGQRHHGTDGNAADGGG--------DQTPPSLLLAARLLYAISLDPGGRSSLLEAKCLPPLIRLRRQL 250
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5481.12946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQF3_ECTSI1.270e-2236.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 20..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5481contigH-paniculata_contig5481:5823..8247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5481.12946.1mRNA_H-paniculata_contig5481.12946.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5481 5711..8926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5481.12946.1 ID=prot_H-paniculata_contig5481.12946.1|Name=mRNA_H-paniculata_contig5481.12946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=372bp
MCNSAEVARGFISGSSSTAVIEKLSCMLRSSNMWAQADAVGCLGWLVGNG
MPSHTLQKLIPAVTLLLSKHNGCSLGLSDCNGGEGRTQNIGDGRRGQGDR
QRVEDAERRQEVALERMDNLRVYSLIFLLKATNADPSTMPMMLANEALDL
LLEILSMANLNYLTRENPNPEHAIPCGERVDDEPTIDDQNPSLVLTAKLL
GAFSLEPVCGAFLLQAKCVPKLLGFRKRLRQHCKVASNTQTTGQASPAAT
LCGHHQHRHQQKHDHACCSRDQNRAPPESANVSVTPRESPATSTIPTNVC
TACPDACDEKKGDDRTNSVTKSRHVLSTREAREGGGCGQDSSIYSEEPQQ
PGLDDLITFVVEQVLSWGVRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold