prot_H-paniculata_contig54769.12937.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54769.12937.1
Unique Nameprot_H-paniculata_contig54769.12937.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0F8A6_9PHAE (Uncharacterized protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F8A6_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.480e-23
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 52
            MQKDFKN+NEYQSPRWGFY  SEILNGR+AMLALLII LIE+YTKKTL+GL+
Sbjct:    1 MQKDFKNLNEYQSPRWGFYLVSEILNGRIAMLALLIIILIEIYTKKTLIGLL 52          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: D1J704_ECTSI (Uncharacterized protein ycf17 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J704_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 6.410e-14
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGL 51
            M K+FK  N+YQS RWGFY  SEILNGRVAM+AL++I LIE++TK+TLL L
Sbjct:    1 MDKNFKKSNDYQS-RWGFYLKSEILNGRVAMIALILILLIEIFTKQTLLNL 50          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0F9W0_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9W0_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.420e-13
Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTL 48
            M K+FK  N+YQS RWGFY  +EILNGRVAM AL+II L+E+YTKKTL
Sbjct:    1 MNKNFKESNDYQS-RWGFYLANEILNGRVAMFALVIIILLEIYTKKTL 47          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A5B9RFU9_9PHAE (Ycf17 protein n=18 Tax=Laminariales TaxID=2886 RepID=A0A5B9RFU9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.120e-12
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLG 50
            M  +FK  N+Y+S RWGFY  SE+LNGRVAM+AL+II L+E++TKKTLL 
Sbjct:    1 MNNNFKKSNDYES-RWGFYLVSEVLNGRVAMVALVIIILLEVFTKKTLLS 49          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A7U1G3M2_9PHAE (Uncharacterized protein n=2 Tax=Laminaria TaxID=33637 RepID=A0A7U1G3M2_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.250e-12
Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLG 50
            M  +FK  N+Y S RWGFY  SE+LNGRVAM+AL+II L+E++TKKTLL 
Sbjct:    1 MNNNFKESNDYDS-RWGFYLVSEVLNGRVAMVALVIIILLEVFTKKTLLS 49          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A0R6M543_UNDPI (Uncharacterized protein n=5 Tax=Alariaceae TaxID=2887 RepID=A0A0R6M543_UNDPI)

HSP 1 Score: 63.5 bits (153), Expect = 3.200e-12
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 52
            M  ++K  N+Y+S RWGFY  SE+LNGRVAM+AL+II L+E++TK+TLL L+
Sbjct:    1 MNNNYKQSNDYES-RWGFYLVSEVLNGRVAMIALVIIILLEVFTKRTLLDLL 51          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A1I9LW12_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW12_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 6.620e-12
Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 52
            M+K+F   +EY+S RWGFY  SEILNGRVAM+AL++I L E +TK+TLL L+
Sbjct:    1 MEKNFNEYDEYES-RWGFYVKSEILNGRVAMIALILILLFEAFTKQTLLNLV 51          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0F7W2_9PHAE (Uncharacterized protein n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7W2_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 9.190e-12
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 52
            M  +FK  N+YQS RWGFY  SE LNGRVAM+AL+II L+E +T+KTLL ++
Sbjct:    1 MNDNFKKSNDYQS-RWGFYLVSETLNGRVAMVALVIIILLETFTRKTLLDMV 51          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0JZ96_9PHAE (Uncharacterized protein n=1 Tax=Egregia menziesii TaxID=105409 RepID=A0A8F0JZ96_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 9.190e-12
Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLL 49
            M  ++K  N+Y+S RWGFY  SE+LNGRVAM+AL+II ++E++TKKTLL
Sbjct:    1 MNNNYKKSNDYES-RWGFYLVSEVLNGRVAMVALVIIIVLEIFTKKTLL 48          
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0FAU5_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAU5_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.850e-11
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 52
            M K+ KN  +Y S RWGFY  SEILNGRVAM+AL+II +IE YT+KTLL ++
Sbjct:    1 MVKNSKNSTDYPS-RWGFYLRSEILNGRVAMIALIIIIVIETYTRKTLLSIL 51          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A8F0F8A6_9PHAE1.480e-2384.62Uncharacterized protein n=1 Tax=Protohalopteris sp... [more]
D1J704_ECTSI6.410e-1468.63Uncharacterized protein ycf17 n=2 Tax=Ectocarpus s... [more]
A0A8F0F9W0_9PHAE1.420e-1370.83Uncharacterized protein n=1 Tax=Chorda asiatica Ta... [more]
A0A5B9RFU9_9PHAE1.120e-1264.00Ycf17 protein n=18 Tax=Laminariales TaxID=2886 Rep... [more]
A0A7U1G3M2_9PHAE2.250e-1264.00Uncharacterized protein n=2 Tax=Laminaria TaxID=33... [more]
A0A0R6M543_UNDPI3.200e-1259.62Uncharacterized protein n=5 Tax=Alariaceae TaxID=2... [more]
A0A1I9LW12_9PHAE6.620e-1261.54Uncharacterized protein n=1 Tax=Pleurocladia lacus... [more]
A0A8F0F7W2_9PHAE9.190e-1261.54Uncharacterized protein n=2 Tax=Laminariales TaxID... [more]
A0A8F0JZ96_9PHAE9.190e-1261.22Uncharacterized protein n=1 Tax=Egregia menziesii ... [more]
A0A8F0FAU5_9PHAE1.850e-1163.46Uncharacterized protein n=1 Tax=Desmarestia aculea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..40
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 11..52
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54769contigH-paniculata_contig54769:739..906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54769.12937.1mRNA_H-paniculata_contig54769.12937.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54769 739..906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54769.12937.1 ID=prot_H-paniculata_contig54769.12937.1|Name=mRNA_H-paniculata_contig54769.12937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLG
LIFVN*
back to top