mRNA_H-paniculata_contig54769.12937.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0F8A6_9PHAE (Uncharacterized protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F8A6_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.480e-23 Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 156
MQKDFKN+NEYQSPRWGFY SEILNGR+AMLALLII LIE+YTKKTL+GL+
Sbjct: 1 MQKDFKNLNEYQSPRWGFYLVSEILNGRIAMLALLIIILIEIYTKKTLIGLL 52
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: D1J704_ECTSI (Uncharacterized protein ycf17 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J704_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 6.410e-14 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGL 153
M K+FK N+YQS RWGFY SEILNGRVAM+AL++I LIE++TK+TLL L
Sbjct: 1 MDKNFKKSNDYQS-RWGFYLKSEILNGRVAMIALILILLIEIFTKQTLLNL 50
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0F9W0_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9W0_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 1.420e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTL 144
M K+FK N+YQS RWGFY +EILNGRVAM AL+II L+E+YTKKTL
Sbjct: 1 MNKNFKESNDYQS-RWGFYLANEILNGRVAMFALVIIILLEIYTKKTL 47
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A5B9RFU9_9PHAE (Ycf17 protein n=18 Tax=Laminariales TaxID=2886 RepID=A0A5B9RFU9_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-12 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLG 150
M +FK N+Y+S RWGFY SE+LNGRVAM+AL+II L+E++TKKTLL
Sbjct: 1 MNNNFKKSNDYES-RWGFYLVSEVLNGRVAMVALVIIILLEVFTKKTLLS 49
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A7U1G3M2_9PHAE (Uncharacterized protein n=2 Tax=Laminaria TaxID=33637 RepID=A0A7U1G3M2_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 2.250e-12 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLG 150
M +FK N+Y S RWGFY SE+LNGRVAM+AL+II L+E++TKKTLL
Sbjct: 1 MNNNFKESNDYDS-RWGFYLVSEVLNGRVAMVALVIIILLEVFTKKTLLS 49
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A0R6M543_UNDPI (Uncharacterized protein n=5 Tax=Alariaceae TaxID=2887 RepID=A0A0R6M543_UNDPI) HSP 1 Score: 63.5 bits (153), Expect = 3.200e-12 Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 156
M ++K N+Y+S RWGFY SE+LNGRVAM+AL+II L+E++TK+TLL L+
Sbjct: 1 MNNNYKQSNDYES-RWGFYLVSEVLNGRVAMIALVIIILLEVFTKRTLLDLL 51
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A1I9LW12_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW12_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 6.620e-12 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 156
M+K+F +EY+S RWGFY SEILNGRVAM+AL++I L E +TK+TLL L+
Sbjct: 1 MEKNFNEYDEYES-RWGFYVKSEILNGRVAMIALILILLFEAFTKQTLLNLV 51
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0F7W2_9PHAE (Uncharacterized protein n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7W2_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 9.190e-12 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 156
M +FK N+YQS RWGFY SE LNGRVAM+AL+II L+E +T+KTLL ++
Sbjct: 1 MNDNFKKSNDYQS-RWGFYLVSETLNGRVAMVALVIIILLETFTRKTLLDMV 51
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0JZ96_9PHAE (Uncharacterized protein n=1 Tax=Egregia menziesii TaxID=105409 RepID=A0A8F0JZ96_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 9.190e-12 Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLL 147
M ++K N+Y+S RWGFY SE+LNGRVAM+AL+II ++E++TKKTLL
Sbjct: 1 MNNNYKKSNDYES-RWGFYLVSEVLNGRVAMVALVIIIVLEIFTKKTLL 48
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Match: A0A8F0FAU5_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAU5_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 1.850e-11 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 1 MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGLI 156
M K+ KN +Y S RWGFY SEILNGRVAM+AL+II +IE YT+KTLL ++
Sbjct: 1 MVKNSKNSTDYPS-RWGFYLRSEILNGRVAMIALIIIIVIETYTRKTLLSIL 51 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54769.12937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig54769.12937.1 >prot_H-paniculata_contig54769.12937.1 ID=prot_H-paniculata_contig54769.12937.1|Name=mRNA_H-paniculata_contig54769.12937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp MQKDFKNINEYQSPRWGFYFFSEILNGRVAMLALLIITLIELYTKKTLLGback to top mRNA from alignment at H-paniculata_contig54769:739..906+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig54769.12937.1 ID=mRNA_H-paniculata_contig54769.12937.1|Name=mRNA_H-paniculata_contig54769.12937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=168bp|location=Sequence derived from alignment at H-paniculata_contig54769:739..906+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig54769:739..906+ >mRNA_H-paniculata_contig54769.12937.1 ID=mRNA_H-paniculata_contig54769.12937.1|Name=mRNA_H-paniculata_contig54769.12937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=336bp|location=Sequence derived from alignment at H-paniculata_contig54769:739..906+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |