prot_H-paniculata_contig5472.12935.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5472.12935.1
Unique Nameprot_H-paniculata_contig5472.12935.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
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BLAST of mRNA_H-paniculata_contig5472.12935.1 vs. uniprot
Match: D7G1T9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T9_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.870e-19
Identity = 69/159 (43.40%), Postives = 93/159 (58.49%), Query Frame = 0 
Query:    1 GTVVDREKAEVEKQHLFAELEGRCRELEMEKQAQAAEYDRKLAEHVAELKTSYLKTKAANREREKLEARHRERFQALEDEKAALRSQLEEKYASASEGLAALSLEKREAQEACSRLREEALKLEERAVTVTNELQTLTEENTGLFEEAESTRAMLAQRG 159
             T   RE+ EVE + L  +LE RCR                          + L  +A  RERE LEARH E+ QALE EKA++R++LE++YAS+SE L ALS EKR+A EACS LR+ A  L++R  T+  EL+ + ++N  L   AES+R +LA RG
Sbjct:  837 STNAGREEMEVESKRLKRDLEARCRXXXXXXXXXXXXXXXXXXXXXXXXXANALDMQAKVREREMLEARHAEKLQALEGEKASMRAELEDRYASSSEELRALSTEKRKADEACSALRDRASALDDRTETMAGELKAMADKNASLTAGAESSRKLLAARG 995
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BLAST of mRNA_H-paniculata_contig5472.12935.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 7.400e-9
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 0 
Query:    1 GTVVDREKAEVEKQHLFAELEGRCRELEMEKQAQAAEYDRKLAEHVAELKTSYLKTKAANREREKLEARHRERFQALEDEKAALRSQLEEKYASASEGLAALSLEKREAQEACSRLREEALKLEERAVTVTNEL 134
             T   RE+ EV+ + L  +LE RCR                            L  +A  RERE LEARH E+ QA      ++ ++LE++YAS+SE L +LS+EKR+A EACS LR+ A  L+ER  T+  EL
Sbjct:  995 STNAGREEMEVKSKRLKRDLEARCRXXXXXXXXXXXXXXXXXXXXXXXXXXXALDMEAKVREREMLEARHAEKLQAXXXXXXSMLAELEDRYASSSEELRSLSIEKRKADEACSALRDRASALDERTETMAGEL 1128
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5472.12935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1T9_ECTSI1.870e-1943.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNU8_9PHAE7.400e-938.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..140
NoneNo IPR availableCOILSCoilCoilcoord: 17..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5472contigH-paniculata_contig5472:9430..13614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5472.12935.1mRNA_H-paniculata_contig5472.12935.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5472 9430..13614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5472.12935.1 ID=prot_H-paniculata_contig5472.12935.1|Name=mRNA_H-paniculata_contig5472.12935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
GTVVDREKAEVEKQHLFAELEGRCRELEMEKQAQAAEYDRKLAEHVAELK
TSYLKTKAANREREKLEARHRERFQALEDEKAALRSQLEEKYASASEGLA
ALSLEKREAQEACSRLREEALKLEERAVTVTNELQTLTEENTGLFEEAES
TRAMLAQRG
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